Click here to switch to the map view.

The map label for this gene is parM

Identifier: 218692929

GI number: 218692929

Start: 114678

End: 115649

Strand: Reverse

Name: parM

Synonym: p1ECUMN_0151

Alternate gene names: 218692929

Gene position: 115649-114678 (Counterclockwise)

Preceding gene: 218692932

Following gene: 218692928

Centisome position: 94.56

GC content: 42.59

Gene sequence:

>972_bases
ATGAACGTATACTGCGATGATGGTTCAACAACAATCAAGTTGGCATGGAATGATAATGGGAAAATCTGTAAGTCGTTGTC
GCAAAACTCATTTCGTCATGGATGGAAGGTTGACGGGTTAGGAATTCGCCAGACATTTAACTATGAACTGGATGGTAAAA
AATACACGTATGATGAAGTTAGCAACCAATCTATTCTTACGACTCATATTGAGTATCAATATACGGATGTTAACCTGTTA
GCTGTGCATCACGCTTTACTGAATAGTGGATTAGCGCCTCAGCCTGTATCATTGACTGTGACTTTGCCTATCAGTGAGTT
CTATACGAAAGAGTGTCAAAAAAATGAACTCAACATTCAGCGTAAAATTGAGAATTTAATGAGGCCGATTCGTCTTAATA
AAGGCGATGTTTTCACCATTGAACACGTTGATGTGATGCCTGAATCATTGCCAGCTGTGTTTTCTCGTCTGGTCGTGGAT
AAAGTTGGTCAGTTCGAAAAATCGCTGGTAGTTGATATTGGCGGCACTACGCTTGATGTTGGTGTTATCGTTGGTCAATT
TGACTCTGTAAGTGCCATTCATGGTAATTCTGGCATTGGTGTGTCTTCAGTTACGAAAGCTGCAATGAGTGCATTGCGCA
TGGCATCCAGTGATACCAGTTTCCTCGTTGCAGATGAATTGATTAAACGTCGTAATGACCCGGACTTTGTTCGGCAGGTT
ATAAATGACGAAACAAAAACTGATCTGGTCCTTAATACCATTGAGGGGGCTATTGCCAGTTTGGGGGAGCAAGTAGTCAA
TGAGCTCGGTGATTTCCATCATGTGAATCGTGTTTATGTTGTCGGTGGTGGGGCCCCGTTGATCTATGATTCGATAAAAA
CGGCATGGCACCATCTTGGGCAAAAAGTAGTGATGATGGAGTCGCCACAGACAGCACTGGTTGAAGCTATCGCGGCTTTC
AAAGAGGAGTAA

Upstream 100 bases:

>100_bases
TGTGTTTTGTGATTTCATAACTATGATGGTGCTCAAATTGAGTATTACCTTGCAACCAGAAACAATGATTTACTCAGATT
GAGTATTTAAGGGGCTATAG

Downstream 100 bases:

>100_bases
TATTGTGGACGATGAACGGAAAAGGAAAAAATACACACTTTATCTGCATCCGGAAAAAGCTGCAGACTTTCAAACTTTGG
AAGCGATAGAGTCCGTTCCG

Product: Plasmid segregation protein

Products: NA

Alternate protein names: ParA locus 36 kDa protein; Protein stbA [H]

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MNVYCDDGSTTIKLAWNDNGKICKSLSQNSFRHGWKVDGLGIRQTFNYELDGKKYTYDEVSNQSILTTHIEYQYTDVNLL
AVHHALLNSGLAPQPVSLTVTLPISEFYTKECQKNELNIQRKIENLMRPIRLNKGDVFTIEHVDVMPESLPAVFSRLVVD
KVGQFEKSLVVDIGGTTLDVGVIVGQFDSVSAIHGNSGIGVSSVTKAAMSALRMASSDTSFLVADELIKRRNDPDFVRQV
INDETKTDLVLNTIEGAIASLGEQVVNELGDFHHVNRVYVVGGGAPLIYDSIKTAWHHLGQKVVMMESPQTALVEAIAAF
KEE

Sequences:

>Translated_323_residues
MNVYCDDGSTTIKLAWNDNGKICKSLSQNSFRHGWKVDGLGIRQTFNYELDGKKYTYDEVSNQSILTTHIEYQYTDVNLL
AVHHALLNSGLAPQPVSLTVTLPISEFYTKECQKNELNIQRKIENLMRPIRLNKGDVFTIEHVDVMPESLPAVFSRLVVD
KVGQFEKSLVVDIGGTTLDVGVIVGQFDSVSAIHGNSGIGVSSVTKAAMSALRMASSDTSFLVADELIKRRNDPDFVRQV
INDETKTDLVLNTIEGAIASLGEQVVNELGDFHHVNRVYVVGGGAPLIYDSIKTAWHHLGQKVVMMESPQTALVEAIAAF
KEE
>Mature_323_residues
MNVYCDDGSTTIKLAWNDNGKICKSLSQNSFRHGWKVDGLGIRQTFNYELDGKKYTYDEVSNQSILTTHIEYQYTDVNLL
AVHHALLNSGLAPQPVSLTVTLPISEFYTKECQKNELNIQRKIENLMRPIRLNKGDVFTIEHVDVMPESLPAVFSRLVVD
KVGQFEKSLVVDIGGTTLDVGVIVGQFDSVSAIHGNSGIGVSSVTKAAMSALRMASSDTSFLVADELIKRRNDPDFVRQV
INDETKTDLVLNTIEGAIASLGEQVVNELGDFHHVNRVYVVGGGAPLIYDSIKTAWHHLGQKVVMMESPQTALVEAIAAF
KEE

Specific function: Involved in the control of plasmid partition. Required for the accurate segregation of the plasmid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the plasmid partition parM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009440 [H]

Pfam domain/function: PF06406 StbA [H]

EC number: NA

Molecular weight: Translated: 35655; Mature: 35655

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVYCDDGSTTIKLAWNDNGKICKSLSQNSFRHGWKVDGLGIRQTFNYELDGKKYTYDEV
CEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCCEECCEEEEEEECEEECCCEEEHHHC
SNQSILTTHIEYQYTDVNLLAVHHALLNSGLAPQPVSLTVTLPISEFYTKECQKNELNIQ
CCCEEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHCCCCHHH
RKIENLMRPIRLNKGDVFTIEHVDVMPESLPAVFSRLVVDKVGQFEKSLVVDIGGTTLDV
HHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEE
GVIVGQFDSVSAIHGNSGIGVSSVTKAAMSALRMASSDTSFLVADELIKRRNDPDFVRQV
EEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHH
INDETKTDLVLNTIEGAIASLGEQVVNELGDFHHVNRVYVVGGGAPLIYDSIKTAWHHLG
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEEECCCCHHHHHHHHHHHHCC
QKVVMMESPQTALVEAIAAFKEE
CEEEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNVYCDDGSTTIKLAWNDNGKICKSLSQNSFRHGWKVDGLGIRQTFNYELDGKKYTYDEV
CEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCCEECCEEEEEEECEEECCCEEEHHHC
SNQSILTTHIEYQYTDVNLLAVHHALLNSGLAPQPVSLTVTLPISEFYTKECQKNELNIQ
CCCEEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHCCCCHHH
RKIENLMRPIRLNKGDVFTIEHVDVMPESLPAVFSRLVVDKVGQFEKSLVVDIGGTTLDV
HHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEE
GVIVGQFDSVSAIHGNSGIGVSSVTKAAMSALRMASSDTSFLVADELIKRRNDPDFVRQV
EEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHH
INDETKTDLVLNTIEGAIASLGEQVVNELGDFHHVNRVYVVGGGAPLIYDSIKTAWHHLG
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEEECCCCHHHHHHHHHHHHCC
QKVVMMESPQTALVEAIAAFKEE
CEEEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3172224; 3023637; 12486014 [H]