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The map label for this gene is resD

Identifier: 218692932

GI number: 218692932

Start: 116929

End: 117738

Strand: Reverse

Name: resD

Synonym: p1ECUMN_0154

Alternate gene names: 218692932

Gene position: 117738-116929 (Counterclockwise)

Preceding gene: 218692933

Following gene: 218692929

Centisome position: 96.27

GC content: 57.41

Gene sequence:

>810_bases
ATGTCAGGCTCCGTTATACACAGCCAGTCTGCAGCCAGGGTACCGGCAGTTTATTCTGCCGGACAGTCTCCACAACTTCC
TGTTGTCATTGATTATCCGGCAGCTCTGGCACTTCGCCAGATGTCGATGGTTCATGATGAACTGCCGAAATATCTGCTGG
CTCCGGAAGTGAGTGCCCTGCTCCATTACGTCCCGGATCTGCGCCGCAAGATGCTGCTGGCCACACTGTGGAACACCGGT
GCGCGCATTAATGAAGCACTGGCGCTGACGCGGGGGGATTTTTCGCTCGCGCCTCCGTATCCGTTTGTGCAGCTGGCCAC
TCTGAAGCAGCGGACCGAAAAAGCCGCCAGGACGGCAGGAAGAACGCCTGCCGGACAGCAGACTCACCGGCTGGTTCCGC
TCTCCGACTCCTGGTACGTCAGTCAGCTGCAGACGATGGTGGCAACACTGAAAATTCCTCTGGAACGGCGTAATAAACGA
ACAGGCAGGACAGAGAAAGCGCGGATCTGGGAAGTGACGGACAGAACGGTCAGGACCTGGATTGGGGAGGCGGTTGCCGC
CGCTGCTACTGACGGTGTGACGTTCTCTGTCCCGGTCACGCCACATACGTTCCGCCATTCCTATGCGATGCACATGCTGT
ATGCCGGTATACCACTGAAGGTCCTGCAGAGCCTGATGGGGCATAAGTCCATCAGCTCAACGGAGGTCTACACGAAGGTG
TTTGCGCTGGATGTGGCTGCACGGCACCGGGTGCAGTTTTCGATGCCTGAGTCCGATGCGGTCACAATGCTGAAAAACAG
ACACGCATAA

Upstream 100 bases:

>100_bases
CAGTGTGCCGGTCTCCGTTATCGGGGAAGAAGTGGCTGATCTCAGTCACCGCGAAAATGACATCAAAAACGCCATTAACC
TGATGTTCTGGGGAATATAA

Downstream 100 bases:

>100_bases
TTCATAAATCATAATTATGAATTGTGATTTATTCTGTAAAAAAAGAGACCACTGCAATATGTGATCTCTTGTATGCAAGG
GTGCTTAAACAGTATGAATT

Product: resolvase

Products: NA

Alternate protein names: Protein D [H]

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSGSVIHSQSAARVPAVYSAGQSPQLPVVIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLRRKMLLATLWNTG
ARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRTPAGQQTHRLVPLSDSWYVSQLQTMVATLKIPLERRNKR
TGRTEKARIWEVTDRTVRTWIGEAVAAAATDGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV
FALDVAARHRVQFSMPESDAVTMLKNRHA

Sequences:

>Translated_269_residues
MSGSVIHSQSAARVPAVYSAGQSPQLPVVIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLRRKMLLATLWNTG
ARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRTPAGQQTHRLVPLSDSWYVSQLQTMVATLKIPLERRNKR
TGRTEKARIWEVTDRTVRTWIGEAVAAAATDGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV
FALDVAARHRVQFSMPESDAVTMLKNRHA
>Mature_268_residues
SGSVIHSQSAARVPAVYSAGQSPQLPVVIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLRRKMLLATLWNTGA
RINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRTPAGQQTHRLVPLSDSWYVSQLQTMVATLKIPLERRNKRT
GRTEKARIWEVTDRTVRTWIGEAVAAAATDGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVF
ALDVAARHRVQFSMPESDAVTMLKNRHA

Specific function: Acts as a repressor of transcription and as a site- specific resolvase that cleaves at the rfsF site [H]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR016423 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 29852; Mature: 29721

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSVIHSQSAARVPAVYSAGQSPQLPVVIDYPAALALRQMSMVHDELPKYLLAPEVSAL
CCCCEECCCCCCCCCHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCHHHHHH
LHYVPDLRRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAG
HHHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
RTPAGQQTHRLVPLSDSWYVSQLQTMVATLKIPLERRNKRTGRTEKARIWEVTDRTVRTW
CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHEEEEHHHHHHHHH
IGEAVAAAATDGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV
HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHH
FALDVAARHRVQFSMPESDAVTMLKNRHA
HHHHHHHHHEEEECCCCHHHHHHHHCCCC
>Mature Secondary Structure 
SGSVIHSQSAARVPAVYSAGQSPQLPVVIDYPAALALRQMSMVHDELPKYLLAPEVSAL
CCCEECCCCCCCCCHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCHHHHHH
LHYVPDLRRKMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAG
HHHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
RTPAGQQTHRLVPLSDSWYVSQLQTMVATLKIPLERRNKRTGRTEKARIWEVTDRTVRTW
CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHEEEEHHHHHHHHH
IGEAVAAAATDGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKV
HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHH
FALDVAARHRVQFSMPESDAVTMLKNRHA
HHHHHHHHHEEEECCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3027661; 3007930; 6327993 [H]