Click here to switch to the map view.

The map label for this gene is yubL

Identifier: 218692909

GI number: 218692909

Start: 98065

End: 98325

Strand: Reverse

Name: yubL

Synonym: p1ECUMN_0124

Alternate gene names: 218692909

Gene position: 98325-98065 (Counterclockwise)

Preceding gene: 218692910

Following gene: 218692908

Centisome position: 80.4

GC content: 53.64

Gene sequence:

>261_bases
GTGCGGGGCATCACCGGAGAGATGAGGATGAGCGAATATTTCAGAATACTTCAGGGGCTGCCTGACGGCTCCTTTACCCG
CGAACAGGCTGAAGCCGTTGCCGCACAGTACCGGAATGTCTTTATCGAGGATGATCAGGGAACGCATTTTCGCCTGGTTG
TCCGCAATAACAGTGGCCTGGTCTGGCGCACCTGGAATTTTGAGGACGGTGCCGGGTACTGGATGAACCATGTCATCCGG
AATTTCGGCATTCTTAAGTAA

Upstream 100 bases:

>100_bases
CGCAGCCGGAGCCTCAGCCGCAACCGCCGGAGGGTGAGGATTACTGGTTTTCAGACGATATCCCGTTCTGAATGACTGAC
TGTGAAAACCGCCCCGTCCA

Downstream 100 bases:

>100_bases
GAGAGGTGCCGGACGCGCAAACGTCCGGCAGGACATAAGCAATTATAAGGGGATGATTATGCCTGTAACGAAGTGTGAAC
CAGAAACCACCCGCAAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MRGITGEMRMSEYFRILQGLPDGSFTREQAEAVAAQYRNVFIEDDQGTHFRLVVRNNSGLVWRTWNFEDGAGYWMNHVIR
NFGILK

Sequences:

>Translated_86_residues
MRGITGEMRMSEYFRILQGLPDGSFTREQAEAVAAQYRNVFIEDDQGTHFRLVVRNNSGLVWRTWNFEDGAGYWMNHVIR
NFGILK
>Mature_86_residues
MRGITGEMRMSEYFRILQGLPDGSFTREQAEAVAAQYRNVFIEDDQGTHFRLVVRNNSGLVWRTWNFEDGAGYWMNHVIR
NFGILK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0401 family [H]

Homologues:

Organism=Escherichia coli, GI1786443, Length=66, Percent_Identity=59.0909090909091, Blast_Score=84, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009253
- ProDom:   PD028015 [H]

Pfam domain/function: PF06006 DUF905 [H]

EC number: NA

Molecular weight: Translated: 10073; Mature: 10073

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGITGEMRMSEYFRILQGLPDGSFTREQAEAVAAQYRNVFIEDDQGTHFRLVVRNNSGL
CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCEEEECCCCCEEEEEEECCCCE
VWRTWNFEDGAGYWMNHVIRNFGILK
EEEECCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MRGITGEMRMSEYFRILQGLPDGSFTREQAEAVAAQYRNVFIEDDQGTHFRLVVRNNSGL
CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCEEEECCCCCEEEEEEECCCCE
VWRTWNFEDGAGYWMNHVIRNFGILK
EEEECCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA