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The map label for this gene is traU

Identifier: 218692880

GI number: 218692880

Start: 77043

End: 78035

Strand: Reverse

Name: traU

Synonym: p1ECUMN_0095

Alternate gene names: 218692880

Gene position: 78035-77043 (Counterclockwise)

Preceding gene: 218692881

Following gene: 218692879

Centisome position: 63.81

GC content: 54.68

Gene sequence:

>993_bases
ATGAAGCGAAGCCTGTGGCTGCTGATGTTATTCCTTCTCGCCGGTCATGTCCCTGCGGCATCTGCGGATTCTGCCTGTGA
GGGGCGTTTTGTAAACCCGATCACGGATATCTGCTGGAGCTGTATTTTCCCGCTCTCGCTGGGCAGTATCAAAGTCAGTC
AGGGTAAGGTCCCCGACACGGCGAACCCGTCGATGCCCATTCAGATTTGTCCGGCACCGCCGCCGCTGTTCAGGCGTATC
GGGCTGGCCATTGGTTACTGGGAGCCGATGGCGCTGACGGACGTCACCCGGTCACCGGGATGCATGGTGAACCTGGGCTT
CAGCCTGCCGGCTTTTGGTAAAACGGCACAGGGAACGGCGAAAAAGGATGAGAAGCAGGTGAACGGGGCGTTCTATCACG
TTCACTGGTACAAATACCCGCTGACGTACTGGCTTAACATCATCACATCGCTGGGCTGTCTGGAAGGTGGTGACCTGGAT
ATCGCTTATCTTTCTGAAATTGACCCCACCTGGACGGACAGCAGCCTGACCACCATTCTCAATCCGGAAGCTGTCATCTT
TGCCAATCCGATAGCACAGGGGGCCTGCGCAGCAGATGCCATTGCCAGTGCCTTTAATATGCCTCTCGATGTTCTGTTCT
GGTGTGCCGGTTCGCAGGGCAGTATGTACCCGTTCAATGGCTGGGTGAGTAATGAGTCCAGTCCGTTGCAGTCCTCCCTG
CTGGTCAGTGAACGCATGGCATTCAAGCTGCACCGTCAGGGCATGATTATGGAAACCATCGGGAAAAATAACGCCGTCTG
TAATGAATATCCGTCCCCAATCCTGCCTAAAGAACGCTGGCGTTATCAGATGGTGAATATGTATCCGGACAGCGGACAGT
GCCATCCGTTCGGGCGCAGTGTGATGCGCTGGGAGACGGGAAAAAATCCGCCCAACACAAAGAAAAACTTCGGCTACCTG
ATGTGGCGTAAACGTAACTGTGTATTCCTGTAA

Upstream 100 bases:

>100_bases
GCCAGCGCCTCGGCATTGATCAGGTCCCGGCACGGGTGAGCGCCGTTCCCGGCGATCGCTTCCTGAAGGTGGAATTTATT
CCGGCAGAGGAGGGCAGAAA

Downstream 100 bases:

>100_bases
ATCATTTTAATGAATAAGAGGAAATGAAAATGGCAACAATGGACAGTAAATATATTCAGCACCTCAGGAAAATAAGTGCT
GTGCTGCTCAGGCTGATAAG

Product: conjugal transfer protein TraU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKRSLWLLMLFLLAGHVPAASADSACEGRFVNPITDICWSCIFPLSLGSIKVSQGKVPDTANPSMPIQICPAPPPLFRRI
GLAIGYWEPMALTDVTRSPGCMVNLGFSLPAFGKTAQGTAKKDEKQVNGAFYHVHWYKYPLTYWLNIITSLGCLEGGDLD
IAYLSEIDPTWTDSSLTTILNPEAVIFANPIAQGACAADAIASAFNMPLDVLFWCAGSQGSMYPFNGWVSNESSPLQSSL
LVSERMAFKLHRQGMIMETIGKNNAVCNEYPSPILPKERWRYQMVNMYPDSGQCHPFGRSVMRWETGKNPPNTKKNFGYL
MWRKRNCVFL

Sequences:

>Translated_330_residues
MKRSLWLLMLFLLAGHVPAASADSACEGRFVNPITDICWSCIFPLSLGSIKVSQGKVPDTANPSMPIQICPAPPPLFRRI
GLAIGYWEPMALTDVTRSPGCMVNLGFSLPAFGKTAQGTAKKDEKQVNGAFYHVHWYKYPLTYWLNIITSLGCLEGGDLD
IAYLSEIDPTWTDSSLTTILNPEAVIFANPIAQGACAADAIASAFNMPLDVLFWCAGSQGSMYPFNGWVSNESSPLQSSL
LVSERMAFKLHRQGMIMETIGKNNAVCNEYPSPILPKERWRYQMVNMYPDSGQCHPFGRSVMRWETGKNPPNTKKNFGYL
MWRKRNCVFL
>Mature_330_residues
MKRSLWLLMLFLLAGHVPAASADSACEGRFVNPITDICWSCIFPLSLGSIKVSQGKVPDTANPSMPIQICPAPPPLFRRI
GLAIGYWEPMALTDVTRSPGCMVNLGFSLPAFGKTAQGTAKKDEKQVNGAFYHVHWYKYPLTYWLNIITSLGCLEGGDLD
IAYLSEIDPTWTDSSLTTILNPEAVIFANPIAQGACAADAIASAFNMPLDVLFWCAGSQGSMYPFNGWVSNESSPLQSSL
LVSERMAFKLHRQGMIMETIGKNNAVCNEYPSPILPKERWRYQMVNMYPDSGQCHPFGRSVMRWETGKNPPNTKKNFGYL
MWRKRNCVFL

Specific function: Appears to be more essential to conjugal DNA transfer than to assembly of pilus filaments. Required for F plasmid conjugative transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009649 [H]

Pfam domain/function: PF06834 TraU [H]

EC number: NA

Molecular weight: Translated: 36696; Mature: 36696

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSLWLLMLFLLAGHVPAASADSACEGRFVNPITDICWSCIFPLSLGSIKVSQGKVPDT
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCC
ANPSMPIQICPAPPPLFRRIGLAIGYWEPMALTDVTRSPGCMVNLGFSLPAFGKTAQGTA
CCCCCCEEECCCCCHHHHHHHHHEECCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCC
KKDEKQVNGAFYHVHWYKYPLTYWLNIITSLGCLEGGDLDIAYLSEIDPTWTDSSLTTIL
CCHHHHCCCEEEEEEEEECHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEE
NPEAVIFANPIAQGACAADAIASAFNMPLDVLFWCAGSQGSMYPFNGWVSNESSPLQSSL
CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEECCCCCCHHHHH
LVSERMAFKLHRQGMIMETIGKNNAVCNEYPSPILPKERWRYQMVNMYPDSGQCHPFGRS
HHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCCCCCCCCH
VMRWETGKNPPNTKKNFGYLMWRKRNCVFL
HEEECCCCCCCCCCCCCCEEEEECCCEECC
>Mature Secondary Structure
MKRSLWLLMLFLLAGHVPAASADSACEGRFVNPITDICWSCIFPLSLGSIKVSQGKVPDT
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCC
ANPSMPIQICPAPPPLFRRIGLAIGYWEPMALTDVTRSPGCMVNLGFSLPAFGKTAQGTA
CCCCCCEEECCCCCHHHHHHHHHEECCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCC
KKDEKQVNGAFYHVHWYKYPLTYWLNIITSLGCLEGGDLDIAYLSEIDPTWTDSSLTTIL
CCHHHHCCCEEEEEEEEECHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEE
NPEAVIFANPIAQGACAADAIASAFNMPLDVLFWCAGSQGSMYPFNGWVSNESSPLQSSL
CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEECCCCCCHHHHH
LVSERMAFKLHRQGMIMETIGKNNAVCNEYPSPILPKERWRYQMVNMYPDSGQCHPFGRS
HHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCCCCCCCCH
VMRWETGKNPPNTKKNFGYLMWRKRNCVFL
HEEECCCCCCCCCCCCCCEEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2198250; 7915817; 2050638; 1355084 [H]