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The map label for this gene is traW

Identifier: 218692881

GI number: 218692881

Start: 78032

End: 78778

Strand: Reverse

Name: traW

Synonym: p1ECUMN_0096

Alternate gene names: 218692881

Gene position: 78778-78032 (Counterclockwise)

Preceding gene: 218692882

Following gene: 218692880

Centisome position: 64.41

GC content: 59.84

Gene sequence:

>747_bases
ATGGCAGCAGAAACACCACGCGGTCATTCTGGTGTCGCCTGCCGTGGTACAGGGGGCACCGGATATCACCCGGGAAATCC
AGCAGGATATTGCCCGGCGAATGAGGGCGGAACCATGAGATGCCGGGGGCTGATTGCCCTGCTGATATGGGGGCAGAGTG
TGGTCGCCGCCGATCTTGGCACCTGGGGCGATCTGTGGCCGGTAAAGGAGCCGGACATGCTGACGGTGATCATGCAGCGC
CTGACGGCGCTGGAGCAGTCCGGTGAGATGGGCCGGAAAATGGATGCCTTTAAGGAGCGGGTGATCCGTAACAGTCTGCG
GCCCCCTGCCGTGCCCGGTATCGGACGCACGGAGAAATACAGTAGCCGGTTGTTTGACCCGTCCGTCAGACTGGCTGCGG
ATATCCGGGATAACGAAGGGCGGGTGTTTGCCCGTCAGGGTGAAGTGATGAATCCGCTGCAGTATGTGCCTTTTAACCAG
GCGCTGTATTTCATCAATGGCGATGATCCGGCGCAGGTGGCCTGGATGAAACGCCAGACGCCGCCCACACTGGAGAGCAA
AATTATCCTCGTGCAGGGCAGTATCCCGGAGATGCAGAAGTCTCTGGACAGCCGTGTTTACTTTGACCAGAACGGTGTGC
TCTGCCAGCGCCTCGGCATTGATCAGGTCCCGGCACGGGTGAGCGCCGTTCCCGGCGATCGCTTCCTGAAGGTGGAATTT
ATTCCGGCAGAGGAGGGCAGAAAATGA

Upstream 100 bases:

>100_bases
ATGCGTTTTTTGACAGCGCCAGTCAGAAACAACTGTCAGAAGCACAGTCAAAAGCCCTTTCAGCGCGTTTTAACACGGCA
CTGGAAGCCAGCCTGCAGGC

Downstream 100 bases:

>100_bases
AGCGAAGCCTGTGGCTGCTGATGTTATTCCTTCTCGCCGGTCATGTCCCTGCGGCATCTGCGGATTCTGCCTGTGAGGGG
CGTTTTGTAAACCCGATCAC

Product: conjugal transfer protein TraW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MAAETPRGHSGVACRGTGGTGYHPGNPAGYCPANEGGTMRCRGLIALLIWGQSVVAADLGTWGDLWPVKEPDMLTVIMQR
LTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTEKYSSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ
ALYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFLKVEF
IPAEEGRK

Sequences:

>Translated_248_residues
MAAETPRGHSGVACRGTGGTGYHPGNPAGYCPANEGGTMRCRGLIALLIWGQSVVAADLGTWGDLWPVKEPDMLTVIMQR
LTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTEKYSSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ
ALYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFLKVEF
IPAEEGRK
>Mature_247_residues
AAETPRGHSGVACRGTGGTGYHPGNPAGYCPANEGGTMRCRGLIALLIWGQSVVAADLGTWGDLWPVKEPDMLTVIMQRL
TALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTEKYSSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQA
LYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFLKVEFI
PAEEGRK

Specific function: Involved in F-pilus assembly. Required for F plasmid conjugative transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014114 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27301; Mature: 27169

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAETPRGHSGVACRGTGGTGYHPGNPAGYCPANEGGTMRCRGLIALLIWGQSVVAADLG
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHEEEEEHHCCHHEEHHCC
TWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTEKY
CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
SSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQALYFINGDDPAQVAWMKRQT
HHHCCCCCEEEEEEEECCCCEEEEECCCCCCCHHCCCCCCEEEEEECCCCHHEEEECCCC
PPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFLKVEF
CCCCCCEEEEEECCCHHHHHHHHCEEEECCCCCEEECCCCCCCCCEEEECCCCEEEEEEE
IPAEEGRK
EECCCCCC
>Mature Secondary Structure 
AAETPRGHSGVACRGTGGTGYHPGNPAGYCPANEGGTMRCRGLIALLIWGQSVVAADLG
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHEEEEEHHCCHHEEHHCC
TWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTEKY
CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
SSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQALYFINGDDPAQVAWMKRQT
HHHCCCCCEEEEEEEECCCCEEEEECCCCCCCHHCCCCCCEEEEEECCCCHHEEEECCCC
PPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFLKVEF
CCCCCCEEEEEECCCHHHHHHHHCEEEECCCCCEEECCCCCCCCCEEEECCCCEEEEEEE
IPAEEGRK
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1355084; 7915817; 2198250 [H]