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The map label for this gene is traT

Identifier: 218692867

GI number: 218692867

Start: 65516

End: 66250

Strand: Reverse

Name: traT

Synonym: p1ECUMN_0081

Alternate gene names: 218692867

Gene position: 66250-65516 (Counterclockwise)

Preceding gene: 218692868

Following gene: 218692866

Centisome position: 54.17

GC content: 49.39

Gene sequence:

>735_bases
TTGATGAAAATGAAAAAATTGATGATGGTTGCACTGGTCAGTTCCACTCTGGCCCTTTCAGGGTGTGGTGCGATGAGCAC
AGCAATCAAGAAGCGTAACCTTGAGGTGAAGACTCAGATGAGTGAGACCATCTGGCTTGAACCCGCCAGCGAACGCACGG
TATTTCTGCAGATCAAAAACACGTCTGATAAAGACATGAGTGGGCTGCAGGGCAAAATTGCTGATGCTGTGAAAGCAAAA
GGATATCAGGTGGTGACTTCTCCGGATAAAGCCTACTACTGGATTCAGGCGAATGTGCTGAAGGCCGATAAGATGGATCT
GCGGGAGTCTCAGGGATGGCTGAACCGTGGTTATGAAGGCGCAGCAGTTGGTGCAGCGTTAGGTGCCGGTATTACCGGCT
ATAACTCAAATTCTGCCGGTGCCACACTCGGTGTAGGCCTTGCTGCTGGTCTGGTGGGTATGGCTGCAGATGCGATGGTG
GAAGATGTGAACTATACCATGATCACGGATGTACAGATTGCAGAGCGTACTAAGGCAACGGTGACAACGGATAATGTTGC
CGCCCTGCGTCAGGGCACATCAGGTGCGAAAATTCAGACCAGTACTGAAACAGGTAACCAGCATAAATACCAGACCCGTG
TGGTTTCAAATGCGAACAAGGTTAACCTGAAATTTGAAGAGGCGAAGCCTGTTCTCGAAGACCAACTGGCCAAATCAATC
GCAAATATTCTCTGA

Upstream 100 bases:

>100_bases
TGTGGATATCGGTGGTAATTCATATGGTTATAGTTCAAAACGATATGATGAGTGAATCTTAATTTGTATATTATGACGTT
TTATTCAATATGAAGGAACA

Downstream 100 bases:

>100_bases
ACCTCGTCAGGAGGCTGATCTGACCGGCCTCCTTGCTGACGCCTCGCGTTGCTCGTTGTCCAACCCCGGGATGTAACAAA
ATAAATTTTGTCACCTCCCG

Product: conjugal transfer protein TraT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MMKMKKLMMVALVSSTLALSGCGAMSTAIKKRNLEVKTQMSETIWLEPASERTVFLQIKNTSDKDMSGLQGKIADAVKAK
GYQVVTSPDKAYYWIQANVLKADKMDLRESQGWLNRGYEGAAVGAALGAGITGYNSNSAGATLGVGLAAGLVGMAADAMV
EDVNYTMITDVQIAERTKATVTTDNVAALRQGTSGAKIQTSTETGNQHKYQTRVVSNANKVNLKFEEAKPVLEDQLAKSI
ANIL

Sequences:

>Translated_244_residues
MMKMKKLMMVALVSSTLALSGCGAMSTAIKKRNLEVKTQMSETIWLEPASERTVFLQIKNTSDKDMSGLQGKIADAVKAK
GYQVVTSPDKAYYWIQANVLKADKMDLRESQGWLNRGYEGAAVGAALGAGITGYNSNSAGATLGVGLAAGLVGMAADAMV
EDVNYTMITDVQIAERTKATVTTDNVAALRQGTSGAKIQTSTETGNQHKYQTRVVSNANKVNLKFEEAKPVLEDQLAKSI
ANIL
>Mature_244_residues
MMKMKKLMMVALVSSTLALSGCGAMSTAIKKRNLEVKTQMSETIWLEPASERTVFLQIKNTSDKDMSGLQGKIADAVKAK
GYQVVTSPDKAYYWIQANVLKADKMDLRESQGWLNRGYEGAAVGAALGAGITGYNSNSAGATLGVGLAAGLVGMAADAMV
EDVNYTMITDVQIAERTKATVTTDNVAALRQGTSGAKIQTSTETGNQHKYQTRVVSNANKVNLKFEEAKPVLEDQLAKSI
ANIL

Specific function: Responsible for preventing unproductive conjugation between bacteria carrying like plasmids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the traT lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008874 [H]

Pfam domain/function: PF05818 TraT [H]

EC number: NA

Molecular weight: Translated: 26062; Mature: 26062

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKMKKLMMVALVSSTLALSGCGAMSTAIKKRNLEVKTQMSETIWLEPASERTVFLQIKN
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCEEEECCCCCCEEEEEEEC
TSDKDMSGLQGKIADAVKAKGYQVVTSPDKAYYWIQANVLKADKMDLRESQGWLNRGYEG
CCCCCHHCCCHHHHHHHHCCCEEEEECCCCEEEEEEEEEEECCHHHHHHHCHHHHCCCCC
AAVGAALGAGITGYNSNSAGATLGVGLAAGLVGMAADAMVEDVNYTMITDVQIAERTKAT
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEE
VTTDNVAALRQGTSGAKIQTSTETGNQHKYQTRVVSNANKVNLKFEEAKPVLEDQLAKSI
EECCCHHHHHCCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHH
ANIL
HHCC
>Mature Secondary Structure
MMKMKKLMMVALVSSTLALSGCGAMSTAIKKRNLEVKTQMSETIWLEPASERTVFLQIKN
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCEEEECCCCCCEEEEEEEC
TSDKDMSGLQGKIADAVKAKGYQVVTSPDKAYYWIQANVLKADKMDLRESQGWLNRGYEG
CCCCCHHCCCHHHHHHHHCCCEEEEECCCCEEEEEEEEEEECCHHHHHHHCHHHHCCCCC
AAVGAALGAGITGYNSNSAGATLGVGLAAGLVGMAADAMVEDVNYTMITDVQIAERTKAT
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEE
VTTDNVAALRQGTSGAKIQTSTETGNQHKYQTRVVSNANKVNLKFEEAKPVLEDQLAKSI
EECCCHHHHHCCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHH
ANIL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3323526; 7915817; 2680768 [H]