| Definition | Escherichia coli UMN026 plasmid p1ESCUM, complete sequence. |
|---|---|
| Accession | NC_011749 |
| Length | 122,301 |
Click here to switch to the map view.
The map label for this gene is 218692866
Identifier: 218692866
GI number: 218692866
Start: 64576
End: 65379
Strand: Reverse
Name: 218692866
Synonym: p1ECUMN_0080
Alternate gene names: NA
Gene position: 65379-64576 (Counterclockwise)
Preceding gene: 218692867
Following gene: 218692865
Centisome position: 53.46
GC content: 46.02
Gene sequence:
>804_bases GTGCAAATTCTTTGTGCGACCGTGAAGTGTTGCCGGCGAAGCCGGGATCTTCCGGAGAAAGTCATTATGACATCAGACAA TATCGCTGAATATGTTGGTGAGAATAATCAATTTACTGAGAAGCCTGTAACTGAATACCCCCCGGTGATACAGGATAATA CAGTGACCACTAAAGACTATCTGTACAGCAATAATATTGATACTGACCTTTTAGTGGTTATCGGAGGGCTTATTGTTATA TTGTTTCTCATGATGCTTATCATGTACTTTATTAATTCTCTCAGGCATAAGGAATTAACTGAAATACTGGAAAAAATATC TTTTCCTGAAAAATCCGGGAGCAATTTGCTTAAACCGGAGGCGGTCAGCTGTAATTTGTTGTCCCTGTGTGTGCTGGCAC CGGTACTCTGTACACCCAGAAAGCTGGCAGAAGTCTCCAGGGAGATCATCGTGGCGAGTGCGCAGGAAATTGCATGGACG CCGGGGAGCAGTCGTATTGATGGTCATCAGGGCGAAAATATTACCTGGTCTCTGTCATCGCAGTCTCCTGCCGATAAGTA TGATCTCATCAATAAAACCTCCCGTGTTTCTCCTGACAGTGGCCGTTTTTATGAACCGGACACAGTTCTGGATCACCGTG AACGGGTACGCCTTTTTATTCAGATCCAGTTTCCGCACGGGAGTGACTGGTCTGAAGTATTGCGACTGACTGACATTGTT ACAGAGAAGGTCTCTTCCGGCAGGGCTGCAGGCGGGTATCACCACCGGCATACAGGGTACACCTGGTCTGTTTCTGTGAA TTAA
Upstream 100 bases:
>100_bases TGACGCCTCGCGTTGCTCGTTGTCCAACCCCGGGATGTAACAAAATAAATTTTGTCACCTCCCGGCGTTTCCGAAATAAA TATGAAAACACTGAGCGGTT
Downstream 100 bases:
>100_bases CCCCACATCATCCTTTTCTGCCCTGTTCCAGATTTTCCCGGAGTTTCATCATGAGTTTTAACGCAAAGGATATGACCCAG GGCGGTCAGATTGCGTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MQILCATVKCCRRSRDLPEKVIMTSDNIAEYVGENNQFTEKPVTEYPPVIQDNTVTTKDYLYSNNIDTDLLVVIGGLIVI LFLMMLIMYFINSLRHKELTEILEKISFPEKSGSNLLKPEAVSCNLLSLCVLAPVLCTPRKLAEVSREIIVASAQEIAWT PGSSRIDGHQGENITWSLSSQSPADKYDLINKTSRVSPDSGRFYEPDTVLDHRERVRLFIQIQFPHGSDWSEVLRLTDIV TEKVSSGRAAGGYHHRHTGYTWSVSVN
Sequences:
>Translated_267_residues MQILCATVKCCRRSRDLPEKVIMTSDNIAEYVGENNQFTEKPVTEYPPVIQDNTVTTKDYLYSNNIDTDLLVVIGGLIVI LFLMMLIMYFINSLRHKELTEILEKISFPEKSGSNLLKPEAVSCNLLSLCVLAPVLCTPRKLAEVSREIIVASAQEIAWT PGSSRIDGHQGENITWSLSSQSPADKYDLINKTSRVSPDSGRFYEPDTVLDHRERVRLFIQIQFPHGSDWSEVLRLTDIV TEKVSSGRAAGGYHHRHTGYTWSVSVN >Mature_267_residues MQILCATVKCCRRSRDLPEKVIMTSDNIAEYVGENNQFTEKPVTEYPPVIQDNTVTTKDYLYSNNIDTDLLVVIGGLIVI LFLMMLIMYFINSLRHKELTEILEKISFPEKSGSNLLKPEAVSCNLLSLCVLAPVLCTPRKLAEVSREIIVASAQEIAWT PGSSRIDGHQGENITWSLSSQSPADKYDLINKTSRVSPDSGRFYEPDTVLDHRERVRLFIQIQFPHGSDWSEVLRLTDIV TEKVSSGRAAGGYHHRHTGYTWSVSVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30077; Mature: 30077
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQILCATVKCCRRSRDLPEKVIMTSDNIAEYVGENNQFTEKPVTEYPPVIQDNTVTTKDY CCHHHHHHHHHHHCCCCCHHHEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH LYSNNIDTDLLVVIGGLIVILFLMMLIMYFINSLRHKELTEILEKISFPEKSGSNLLKPE EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCC AVSCNLLSLCVLAPVLCTPRKLAEVSREIIVASAQEIAWTPGSSRIDGHQGENITWSLSS CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEECC QSPADKYDLINKTSRVSPDSGRFYEPDTVLDHRERVRLFIQIQFPHGSDWSEVLRLTDIV CCCCHHHHHHHHHCCCCCCCCCEECCCHHHHHHCEEEEEEEEECCCCCCHHHHHHHHHHH TEKVSSGRAAGGYHHRHTGYTWSVSVN HHHHHCCCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MQILCATVKCCRRSRDLPEKVIMTSDNIAEYVGENNQFTEKPVTEYPPVIQDNTVTTKDY CCHHHHHHHHHHHCCCCCHHHEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH LYSNNIDTDLLVVIGGLIVILFLMMLIMYFINSLRHKELTEILEKISFPEKSGSNLLKPE EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCC AVSCNLLSLCVLAPVLCTPRKLAEVSREIIVASAQEIAWTPGSSRIDGHQGENITWSLSS CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEECC QSPADKYDLINKTSRVSPDSGRFYEPDTVLDHRERVRLFIQIQFPHGSDWSEVLRLTDIV CCCCHHHHHHHHHCCCCCCCCCEECCCHHHHHHCEEEEEEEEECCCCCCHHHHHHHHHHH TEKVSSGRAAGGYHHRHTGYTWSVSVN HHHHHCCCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA