Click here to switch to the map view.

The map label for this gene is yjjL [H]

Identifier: 218697676

GI number: 218697676

Start: 4546901

End: 4548184

Strand: Direct

Name: yjjL [H]

Synonym: EC55989_4444

Alternate gene names: 218697676

Gene position: 4546901-4548184 (Clockwise)

Preceding gene: 218697675

Following gene: 218697677

Centisome position: 88.21

GC content: 50.86

Gene sequence:

>1284_bases
ATGGACGTTGATGTGTCAACCAGTGTTGCGGGTAATAAACCGCAACGGATTCGTCGTATTCAGACAGTGACCCTGGTTTT
ATTATTTATGGCGGGGATCGTTAATTTTCTCGACCGTTCGTCATTGAGCGTGGCAGGTGAAGCGATTCGTGGCGAGTTAG
GATTATCGGCGACAGAGTTTGGTGTTTTGCTTTCTGCATTTTCTCTGTCTTATGGTTTTTCACAACTACCTTCCGGTATT
TTGCTAGACCGCTTTGGCCCACGAATTGTTTTAGGCGCAGGCTTAATATTCTGGTCATTAATGCAGGCATTAACAGGAAT
GGTTAATTCTTTTAGCCACTTTATTTTAATGCGTATCGGTCTGGGTATTGGCGAAGCGCCATTTATGCCTGCGGGAGTAA
AGTCGATCACCGACTGGTATGCACAAAAAGAACGCGGCACGGCGCTGGGGATTTTTAACTCATCTACCGTTATCGGTCAG
GCTATCGCGCCTCCTGCTCTTGTATTGATGCAGCTGGCATGGGGCTGGCGGACGATGTTCGTTATCATCGGCGTGGCAGG
GATTCTGGTTGGGATCTGTTGGTACGCGTGGTATCGCAACCGGGCGCAGTTTGTCCTGACTGACGAAGAACGGACGTATC
TCTCCGCGCCGGTTAAACCGCGTCCACAGCTGCAATTTAGCGAGTGGCTGGCGCTGTTTAAGCATCGGACAACCTGGGGG
ATGATTTTAGGTTTCTCTGGCGTCAATTATACCGGTTGGCTCTACATCGCGTGGTTACCCGGTTATTTGCAAGCCGAGCA
AGGTTTCAGTCTGGCGAAAACCGGTTGGGTGGCGGCGATTCCTTTCCTCGCGGCGGCAGTCGGGATGTGGGTTAACGGTA
TTGTTGTCGATCGACTGGCGAAAAAAGGCTACGACCTGGCGAAGACGCGTAAAACGGCTATTGTCTGCGGTTTGATGATG
TCGGCATTAGGCACGTTGCTGGTCGTGCAATCTTCCTCGCCAGCCCAGGCGGTAGCGTTTATCTCAATGGCGCTATTCTG
CGTGCATTTCGCTGGAACGTCTGCATGGGGGCTGGTGCAGGTGATGGTGTCAGAAACAAAAGTGGCTTCCATCGCCGGGA
TTCAAAACTTTGGCAGTTTTGTTTTTGCTTCCTTTGCTCCGATCGTAACCGGTTGGGTAGTGGATACCACACACTCGTTT
AATCTGGCGTTGGTTATCGCGGCCTGTGTGACGTTCACCGGGGCGCTGTGTTACTTCTTTATTGTCAAAGATCGCATTGA
GTAA

Upstream 100 bases:

>100_bases
ACGACTGGAAGATGGCACATTGTGGAACTGGTAATAACGGTTCGCTTAATTATTTTCTGAATAGTCATCAAATCGATTAA
TTCCGCTCAAGGAGCTAAAA

Downstream 100 bases:

>100_bases
TCGTTACTATCAGGCTCTCTTGCTGTGGGCCTGTAGAATAAAAAAAGCGGATCCTGGAGATCCGCAAAAGTTCACGTTGG
CTTTAGTTATTCGAGTTGAG

Product: Putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MDVDVSTSVAGNKPQRIRRIQTVTLVLLFMAGIVNFLDRSSLSVAGEAIRGELGLSATEFGVLLSAFSLSYGFSQLPSGI
LLDRFGPRIVLGAGLIFWSLMQALTGMVNSFSHFILMRIGLGIGEAPFMPAGVKSITDWYAQKERGTALGIFNSSTVIGQ
AIAPPALVLMQLAWGWRTMFVIIGVAGILVGICWYAWYRNRAQFVLTDEERTYLSAPVKPRPQLQFSEWLALFKHRTTWG
MILGFSGVNYTGWLYIAWLPGYLQAEQGFSLAKTGWVAAIPFLAAAVGMWVNGIVVDRLAKKGYDLAKTRKTAIVCGLMM
SALGTLLVVQSSSPAQAVAFISMALFCVHFAGTSAWGLVQVMVSETKVASIAGIQNFGSFVFASFAPIVTGWVVDTTHSF
NLALVIAACVTFTGALCYFFIVKDRIE

Sequences:

>Translated_427_residues
MDVDVSTSVAGNKPQRIRRIQTVTLVLLFMAGIVNFLDRSSLSVAGEAIRGELGLSATEFGVLLSAFSLSYGFSQLPSGI
LLDRFGPRIVLGAGLIFWSLMQALTGMVNSFSHFILMRIGLGIGEAPFMPAGVKSITDWYAQKERGTALGIFNSSTVIGQ
AIAPPALVLMQLAWGWRTMFVIIGVAGILVGICWYAWYRNRAQFVLTDEERTYLSAPVKPRPQLQFSEWLALFKHRTTWG
MILGFSGVNYTGWLYIAWLPGYLQAEQGFSLAKTGWVAAIPFLAAAVGMWVNGIVVDRLAKKGYDLAKTRKTAIVCGLMM
SALGTLLVVQSSSPAQAVAFISMALFCVHFAGTSAWGLVQVMVSETKVASIAGIQNFGSFVFASFAPIVTGWVVDTTHSF
NLALVIAACVTFTGALCYFFIVKDRIE
>Mature_427_residues
MDVDVSTSVAGNKPQRIRRIQTVTLVLLFMAGIVNFLDRSSLSVAGEAIRGELGLSATEFGVLLSAFSLSYGFSQLPSGI
LLDRFGPRIVLGAGLIFWSLMQALTGMVNSFSHFILMRIGLGIGEAPFMPAGVKSITDWYAQKERGTALGIFNSSTVIGQ
AIAPPALVLMQLAWGWRTMFVIIGVAGILVGICWYAWYRNRAQFVLTDEERTYLSAPVKPRPQLQFSEWLALFKHRTTWG
MILGFSGVNYTGWLYIAWLPGYLQAEQGFSLAKTGWVAAIPFLAAAVGMWVNGIVVDRLAKKGYDLAKTRKTAIVCGLMM
SALGTLLVVQSSSPAQAVAFISMALFCVHFAGTSAWGLVQVMVSETKVASIAGIQNFGSFVFASFAPIVTGWVVDTTHSF
NLALVIAACVTFTGALCYFFIVKDRIE

Specific function: Responsible for the transport of L-galactonate from the periplasm across the inner membrane (Probable). Is essential for growth on L-galactonate as the sole carbon source [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI154350196, Length=395, Percent_Identity=23.0379746835443, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI9966811, Length=408, Percent_Identity=24.2647058823529, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI9945322, Length=406, Percent_Identity=23.1527093596059, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI21322234, Length=403, Percent_Identity=23.8213399503722, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI6912666, Length=382, Percent_Identity=20.6806282722513, Blast_Score=73, Evalue=5e-13,
Organism=Escherichia coli, GI2367379, Length=428, Percent_Identity=55.8411214953271, Blast_Score=480, Evalue=1e-136,
Organism=Escherichia coli, GI1789515, Length=438, Percent_Identity=32.648401826484, Blast_Score=215, Evalue=5e-57,
Organism=Escherichia coli, GI87082320, Length=436, Percent_Identity=31.4220183486239, Blast_Score=207, Evalue=1e-54,
Organism=Escherichia coli, GI1789152, Length=448, Percent_Identity=28.5714285714286, Blast_Score=167, Evalue=2e-42,
Organism=Escherichia coli, GI2367193, Length=437, Percent_Identity=24.2562929061785, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI87082071, Length=426, Percent_Identity=23.0046948356808, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI87082310, Length=190, Percent_Identity=28.9473684210526, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI1788573, Length=297, Percent_Identity=23.2323232323232, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17535049, Length=430, Percent_Identity=23.4883720930233, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17560966, Length=294, Percent_Identity=26.1904761904762, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17566884, Length=303, Percent_Identity=26.0726072607261, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI32565914, Length=238, Percent_Identity=25.6302521008403, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI32565916, Length=237, Percent_Identity=25.3164556962025, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17552542, Length=290, Percent_Identity=24.4827586206897, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI115533554, Length=374, Percent_Identity=22.9946524064171, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193205400, Length=364, Percent_Identity=24.4505494505494, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115533556, Length=374, Percent_Identity=22.9946524064171, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25141318, Length=360, Percent_Identity=21.1111111111111, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI25141316, Length=360, Percent_Identity=21.1111111111111, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI25141341, Length=359, Percent_Identity=21.1699164345404, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71997452, Length=384, Percent_Identity=20.8333333333333, Blast_Score=65, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI86561091, Length=314, Percent_Identity=20.7006369426752, Blast_Score=65, Evalue=1e-10,
Organism=Drosophila melanogaster, GI24648416, Length=437, Percent_Identity=22.6544622425629, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI21356189, Length=437, Percent_Identity=22.6544622425629, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24584153, Length=358, Percent_Identity=23.7430167597765, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24639764, Length=355, Percent_Identity=21.9718309859155, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24583789, Length=327, Percent_Identity=22.6299694189602, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45550460, Length=455, Percent_Identity=21.7582417582418, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24655255, Length=403, Percent_Identity=21.5880893300248, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24655271, Length=441, Percent_Identity=21.3151927437642, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI19920686, Length=342, Percent_Identity=23.3918128654971, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI20130135, Length=441, Percent_Identity=21.3151927437642, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24641682, Length=404, Percent_Identity=20.5445544554455, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24654215, Length=347, Percent_Identity=22.7665706051873, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI19922400, Length=283, Percent_Identity=23.6749116607774, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46343; Mature: 46343

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVDVSTSVAGNKPQRIRRIQTVTLVLLFMAGIVNFLDRSSLSVAGEAIRGELGLSATEF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH
GVLLSAFSLSYGFSQLPSGILLDRFGPRIVLGAGLIFWSLMQALTGMVNSFSHFILMRIG
HHHHHHHHHHCCHHHCCCCCCHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LGIGEAPFMPAGVKSITDWYAQKERGTALGIFNSSTVIGQAIAPPALVLMQLAWGWRTMF
CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHH
VIIGVAGILVGICWYAWYRNRAQFVLTDEERTYLSAPVKPRPQLQFSEWLALFKHRTTWG
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCE
MILGFSGVNYTGWLYIAWLPGYLQAEQGFSLAKTGWVAAIPFLAAAVGMWVNGIVVDRLA
EEEECCCCCCCCEEEEEECCCHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
KKGYDLAKTRKTAIVCGLMMSALGTLLVVQSSSPAQAVAFISMALFCVHFAGTSAWGLVQ
HCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
VMVSETKVASIAGIQNFGSFVFASFAPIVTGWVVDTTHSFNLALVIAACVTFTGALCYFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHH
IVKDRIE
HHHHHCC
>Mature Secondary Structure
MDVDVSTSVAGNKPQRIRRIQTVTLVLLFMAGIVNFLDRSSLSVAGEAIRGELGLSATEF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH
GVLLSAFSLSYGFSQLPSGILLDRFGPRIVLGAGLIFWSLMQALTGMVNSFSHFILMRIG
HHHHHHHHHHCCHHHCCCCCCHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LGIGEAPFMPAGVKSITDWYAQKERGTALGIFNSSTVIGQAIAPPALVLMQLAWGWRTMF
CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHH
VIIGVAGILVGICWYAWYRNRAQFVLTDEERTYLSAPVKPRPQLQFSEWLALFKHRTTWG
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCE
MILGFSGVNYTGWLYIAWLPGYLQAEQGFSLAKTGWVAAIPFLAAAVGMWVNGIVVDRLA
EEEECCCCCCCCEEEEEECCCHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
KKGYDLAKTRKTAIVCGLMMSALGTLLVVQSSSPAQAVAFISMALFCVHFAGTSAWGLVQ
HCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
VMVSETKVASIAGIQNFGSFVFASFAPIVTGWVVDTTHSFNLALVIAACVTFTGALCYFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHH
IVKDRIE
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]