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The map label for this gene is yqeC

Identifier: 218696472

GI number: 218696472

Start: 3238248

End: 3239018

Strand: Reverse

Name: yqeC

Synonym: EC55989_3163

Alternate gene names: 218696472

Gene position: 3239018-3238248 (Counterclockwise)

Preceding gene: 218696481

Following gene: 218696471

Centisome position: 62.83

GC content: 50.45

Gene sequence:

>771_bases
GTGAAAAGTATAGTTGACCCATCGGCATTAGTCATTGATTTAGGTGCGCAGAAACGTCCCACTGTGATTTCTGTTGTTGG
TGCTGGGGGGAAAACCAGCTTGCTTTTTTGGCTGGCAGAACTGCTCCAGGCTAGCGGCAGGCGTGTGTTAATCACGACGA
CGACACATATGTTTATGCCAACGTCTCACTGGCCCGTGGTTTTCTGTCGTGATCCCGCCATGCTTCCTCATGCGTCTCTT
ACATCCCCCATTTCATTTTGTTTTCACAGCTGGAAAGCGAACCAGGGAAAAGTGCAGGGATTTACGCCAGAAGCGATTGA
TGCACTGGTGCAACGACCAGAGTGTGACGTAATTCTCATTGAAGCAGATGGCTCGCGTGGAATGCCGTTAAAAGCGCCTG
ATGAGCACGAACCTTGCATACCCAAAAGCAGTTGCTGCGTGATTGCTGTGATGGGAGGACATACTTTGGGCGCGAAAGTG
AGCACAGAAAATGTCCATCGCTGGTCGCAGTTTGCTGATATTACCGGGTTAACACCTGATGCAACCTTGCAACTGAGCGA
TCTCGTTGCGCTGGTTCGCCACCCTCAGGGGGCGTTTAAAAACGTACCGCAAGGTTGTCGGCGAGTCTGGTTCATTAACC
GTTTTTCTCAATGTGAGAATGCGATTGCACAAAGCGAGCTCCTTCAACCGCTGCAACAACACGACGTAGAGGCAATCTGG
CTGGGCGATATACAAGAACATCCTGCAATCGCGCGCAGATTTGTGAATTAG

Upstream 100 bases:

>100_bases
TGGTTCCATTATTTATAGGGGCTAATAACGCCTGATAATTGCGTTACTTCCTGATGGATTAAGTTGGGGATAATTTATCC
CAGAGAGGTCATAAAGACTC

Downstream 100 bases:

>100_bases
CGGCCCGGGTATTCCGGGTTACTGAAAGGATATCCATTGAGGTTGGTATGAATATTTTCACAGAGGCTGCAAAACTCGAA
GAGCAAAATTGTCCGTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKSIVDPSALVIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQASGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASL
TSPISFCFHSWKANQGKVQGFTPEAIDALVQRPECDVILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKV
STENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQPLQQHDVEAIW
LGDIQEHPAIARRFVN

Sequences:

>Translated_256_residues
MKSIVDPSALVIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQASGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASL
TSPISFCFHSWKANQGKVQGFTPEAIDALVQRPECDVILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKV
STENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQPLQQHDVEAIW
LGDIQEHPAIARRFVN
>Mature_256_residues
MKSIVDPSALVIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQASGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASL
TSPISFCFHSWKANQGKVQGFTPEAIDALVQRPECDVILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKV
STENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQPLQQHDVEAIW
LGDIQEHPAIARRFVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082176, Length=256, Percent_Identity=100, Blast_Score=528, Evalue=1e-151,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQEC_ECOLI (Q46809)

Other databases:

- EMBL:   U28375
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   D65071
- RefSeq:   AP_003436.1
- RefSeq:   NP_417352.2
- ProteinModelPortal:   Q46809
- SMR:   Q46809
- STRING:   Q46809
- EnsemblBacteria:   EBESCT00000000163
- EnsemblBacteria:   EBESCT00000016012
- GeneID:   947350
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5464
- KEGG:   eco:b2876
- EchoBASE:   EB2871
- EcoGene:   EG13059
- eggNOG:   NOG68692
- GeneTree:   EBGT00050000010771
- HOGENOM:   HBG467248
- OMA:   LDEKFKY
- ProtClustDB:   CLSK880519
- BioCyc:   EcoCyc:G7495-MONOMER
- Genevestigator:   Q46809
- InterPro:   IPR017587
- InterPro:   IPR013221
- Gene3D:   G3DSA:3.40.1190.10
- TIGRFAMs:   TIGR03172

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28104; Mature: 28104

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIVDPSALVIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQASGRRVLITTTTHMFMP
CCCCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEC
TSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFTPEAIDALVQRPECDVILI
CCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEE
EADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKVSTENVHRWSQFADITGLTPD
ECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCC
ATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQPLQQHDVEAIW
CEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LGDIQEHPAIARRFVN
ECCCCCCHHHHHHHCC
>Mature Secondary Structure
MKSIVDPSALVIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQASGRRVLITTTTHMFMP
CCCCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEC
TSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFTPEAIDALVQRPECDVILI
CCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEE
EADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKVSTENVHRWSQFADITGLTPD
ECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCC
ATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQPLQQHDVEAIW
CEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LGDIQEHPAIARRFVN
ECCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503