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The map label for this gene is ppdC

Identifier: 218696419

GI number: 218696419

Start: 3179591

End: 3179914

Strand: Reverse

Name: ppdC

Synonym: EC55989_3099

Alternate gene names: 218696419

Gene position: 3179914-3179591 (Counterclockwise)

Preceding gene: 218696420

Following gene: 218696418

Centisome position: 61.69

GC content: 54.94

Gene sequence:

>324_bases
ATGTCAGCTTCCCTGAAGAATCAACAAGGCTTTAGCCTGCCGGAGGTAATGGTTGCGATGGTGCTGATGGTGATGATTGT
CACTGCGTTATCGGGTATCCAGCAAACATTAATGAACAGTCTCGCCAGCAGAAACCAGTACCAACAGCTCTGGCGGCATG
GTTGGCAGCAAACGCAACTGCGCGCGATTTCGCCACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGA
TGTGTCAGCATCAGCGTTACGCTAGTTTCACCCGGGGGCAGAGAAGGCGAGATGACCCGCCTGCATTGCCCGAATCGTCA
GTAG

Upstream 100 bases:

>100_bases
AAGGCGTTTCGTTGTGGCGAACAGGCGAAGTCATTGATGGAAACATTGTTTTTTCGCCACGCGGCTGGAGCGATTTTTGT
CCGCTGAAAGAGAGGGCGTT

Downstream 100 bases:

>100_bases
TCAGGAGCCGCTATGTTAAGGGTCTACCATTCCAATCGTCTGGACGTGCTGGAAGCGTTGATGGAGTTTATTGTCGAACG
CGAACGGCTGGACGATCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MSASLKNQQGFSLPEVMVAMVLMVMIVTALSGIQQTLMNSLASRNQYQQLWRHGWQQTQLRAISPPANWQVNRMQTSQAG
CVSISVTLVSPGGREGEMTRLHCPNRQ

Sequences:

>Translated_107_residues
MSASLKNQQGFSLPEVMVAMVLMVMIVTALSGIQQTLMNSLASRNQYQQLWRHGWQQTQLRAISPPANWQVNRMQTSQAG
CVSISVTLVSPGGREGEMTRLHCPNRQ
>Mature_106_residues
SASLKNQQGFSLPEVMVAMVLMVMIVTALSGIQQTLMNSLASRNQYQQLWRHGWQQTQLRAISPPANWQVNRMQTSQAGC
VSISVTLVSPGGREGEMTRLHCPNRQ

Specific function: Not yet known [H]

COG id: COG4967

COG function: function code NU; Tfp pilus assembly protein PilV

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789187, Length=107, Percent_Identity=97.196261682243, Blast_Score=213, Evalue=3e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022204
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF12528 DUF3728 [H]

EC number: NA

Molecular weight: Translated: 11928; Mature: 11797

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASLKNQQGFSLPEVMVAMVLMVMIVTALSGIQQTLMNSLASRNQYQQLWRHGWQQTQL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCE
RAISPPANWQVNRMQTSQAGCVSISVTLVSPGGREGEMTRLHCPNRQ
EEECCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
SASLKNQQGFSLPEVMVAMVLMVMIVTALSGIQQTLMNSLASRNQYQQLWRHGWQQTQL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCE
RAISPPANWQVNRMQTSQAGCVSISVTLVSPGGREGEMTRLHCPNRQ
EEECCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3520484; 9278503; 7934814 [H]