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The map label for this gene is vdcC [H]

Identifier: 218696336

GI number: 218696336

Start: 3080376

End: 3081803

Strand: Reverse

Name: vdcC [H]

Synonym: EC55989_3009

Alternate gene names: 218696336

Gene position: 3081803-3080376 (Counterclockwise)

Preceding gene: 218696337

Following gene: 218696335

Centisome position: 59.78

GC content: 58.05

Gene sequence:

>1428_bases
ATGGCATTTGATGATTTACGCAGCTTTTTACAGGCGCTTGATGACCACGGCCAGTTACTGAAAATCAGCGAAGAAGTGAA
CGCCGAGCCGGATCTGGCAGCAGCAGCTAACGCCACCGGGCGTATCGGCGACGGCGCGCCCGCGCTGTGGTTTGATAATA
TTCGCGGCTTTACCGATGCCCGCGTGGCGATGAACACCATCGGTTCCTGGCAGAACCACGCGATTTCCCTCGGCCTGCCG
CCAAATGCCCCGGTTAAAAAGCAGATTGATGAGTTTATCCGCCGCTGGGATAACTTCCCGATTGCCCCGGAGCGCCGCGC
CAATCCAGCCTGGGCGCAGAACACCGTTGATGGCGACGAGATCAACCTGTTCGATATCCTGCCGCTGTTTCGTTTAAACG
ATGGCGATGGCGGTTTCTATCTCGACAAAGCGTGCGTGGTTTCCCGCGATCCGCTCGACCCGGATAACTTCGGCAAGCAG
AACGTCGGCATCTACCGCATGGAAGTGAAGGGCAAGCGTAAGCTCGGCCTGCAACCGGTGCCGATGCACGATATCGCCCT
GCATCTGCATAAAGCAGAAGAGCGCGGTGAAGATCTGCCGATTGCGATCACGCTCGGTAACGATCCGATCATCACGCTGA
TGGGGGCCACGCCGCTGAAATATGATCAGTCCGAGTACGAAATGGCAGGCGCGCTGCGTGAAAGCCCGTACCCGATCGCC
ACCGCCCCGTTGACCGGTTTTGATGTGCCGTGGGGTTCAGAAGTGATCCTCGAAGGGGTCATCGAAAGCCGTAAACGCGA
AATCGAAGGGCCGTTCGGTGAGTTTACCGGGCACTACTCCGGCGGGCGTAACATGACCGTGGTGCGCATCGATAAAGTCT
CTTACCGCACCAGGCCGATTTTCGAATCGCTGTACCTCGGTATGCCGTGGACCGAAATCGACTACCTGATGGGGCCAGCC
ACCTGCGTGCCGCTGTATCAGCAGCTGAAAGCCGAGTTCCCTGAAGTGCAGGCGGTAAACGCCATGTACACCCATGGCCT
GCTGGCGATTATCTCCACCAAAAAACGCTACGGCGGCTTTGCCCGCGCGGTGGGCCTGCGCGCAATGACCACGCCGCATG
GTCTGGGCTACGTGAAGATGGTGATTATGGTCGATGAAGACGTTGACCCGTTCAACCTGCCGCAGGTGATGTGGGCGCTC
TCCTCGAAAGTGAACCCGGCAGGGGATTTGGTGCAGTTGCCGAATATGTCCGTGCTGGAACTCGATCCAGGCTCAAGCCC
TGCGGGGATCACCGACAAGCTGATTATCGACGCCACTACGCCTGTCGCCCCGGACAACCGTGGTCACTACAGCCAACCGG
TGGTGGATTTACCGGAAACCAAAGCCTGGGCTGAAAAACTGACCGCTATGCTGGCTGCACGTAAATAA

Upstream 100 bases:

>100_bases
TGGTAGCCCGCGTGCTGGATCAATTTGGCCTCGAACATCCCCACGCCAGGCGCTGGCAAGGATTGCCGCAGGCCCGGAAT
TTTTCTCAGGAGAATGAATA

Downstream 100 bases:

>100_bases
GGAGAAGAAGATGATTTGTCCACGTTGTGCCGATGAACAGATTGAAGTGATGGTGAAATCGCCGGTGAAAGATGTCTGGA
CGGTATATCAGTGCCAGCAT

Product: conserved putative non-oxidative hydroxyarylic acid decarboxylase activity

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MAFDDLRSFLQALDDHGQLLKISEEVNAEPDLAAAANATGRIGDGAPALWFDNIRGFTDARVAMNTIGSWQNHAISLGLP
PNAPVKKQIDEFIRRWDNFPIAPERRANPAWAQNTVDGDEINLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDNFGKQ
NVGIYRMEVKGKRKLGLQPVPMHDIALHLHKAEERGEDLPIAITLGNDPIITLMGATPLKYDQSEYEMAGALRESPYPIA
TAPLTGFDVPWGSEVILEGVIESRKREIEGPFGEFTGHYSGGRNMTVVRIDKVSYRTRPIFESLYLGMPWTEIDYLMGPA
TCVPLYQQLKAEFPEVQAVNAMYTHGLLAIISTKKRYGGFARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFNLPQVMWAL
SSKVNPAGDLVQLPNMSVLELDPGSSPAGITDKLIIDATTPVAPDNRGHYSQPVVDLPETKAWAEKLTAMLAARK

Sequences:

>Translated_475_residues
MAFDDLRSFLQALDDHGQLLKISEEVNAEPDLAAAANATGRIGDGAPALWFDNIRGFTDARVAMNTIGSWQNHAISLGLP
PNAPVKKQIDEFIRRWDNFPIAPERRANPAWAQNTVDGDEINLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDNFGKQ
NVGIYRMEVKGKRKLGLQPVPMHDIALHLHKAEERGEDLPIAITLGNDPIITLMGATPLKYDQSEYEMAGALRESPYPIA
TAPLTGFDVPWGSEVILEGVIESRKREIEGPFGEFTGHYSGGRNMTVVRIDKVSYRTRPIFESLYLGMPWTEIDYLMGPA
TCVPLYQQLKAEFPEVQAVNAMYTHGLLAIISTKKRYGGFARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFNLPQVMWAL
SSKVNPAGDLVQLPNMSVLELDPGSSPAGITDKLIIDATTPVAPDNRGHYSQPVVDLPETKAWAEKLTAMLAARK
>Mature_474_residues
AFDDLRSFLQALDDHGQLLKISEEVNAEPDLAAAANATGRIGDGAPALWFDNIRGFTDARVAMNTIGSWQNHAISLGLPP
NAPVKKQIDEFIRRWDNFPIAPERRANPAWAQNTVDGDEINLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDNFGKQN
VGIYRMEVKGKRKLGLQPVPMHDIALHLHKAEERGEDLPIAITLGNDPIITLMGATPLKYDQSEYEMAGALRESPYPIAT
APLTGFDVPWGSEVILEGVIESRKREIEGPFGEFTGHYSGGRNMTVVRIDKVSYRTRPIFESLYLGMPWTEIDYLMGPAT
CVPLYQQLKAEFPEVQAVNAMYTHGLLAIISTKKRYGGFARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFNLPQVMWALS
SKVNPAGDLVQLPNMSVLELDPGSSPAGITDKLIIDATTPVAPDNRGHYSQPVVDLPETKAWAEKLTAMLAARK

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=496, Percent_Identity=27.8225806451613, Blast_Score=173, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6320748, Length=449, Percent_Identity=26.0579064587973, Blast_Score=101, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 52365; Mature: 52234

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFDDLRSFLQALDDHGQLLKISEEVNAEPDLAAAANATGRIGDGAPALWFDNIRGFTDA
CCHHHHHHHHHHHCCCCCEEEEHHHCCCCCCHHHHCCCCCCCCCCCCEEEECCCCCCCHH
RVAMNTIGSWQNHAISLGLPPNAPVKKQIDEFIRRWDNFPIAPERRANPAWAQNTVDGDE
HHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
INLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDNFGKQNVGIYRMEVKGKRKLGLQPV
EEHEEECEEEEEECCCCCEEECCEEEEECCCCCCCCCCCCCCCEEEEEECCCHHCCCCCC
PMHDIALHLHKAEERGEDLPIAITLGNDPIITLMGATPLKYDQSEYEMAGALRESPYPIA
CHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEE
TAPLTGFDVPWGSEVILEGVIESRKREIEGPFGEFTGHYSGGRNMTVVRIDKVSYRTRPI
ECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEEEEECCCCCCCHH
FESLYLGMPWTEIDYLMGPATCVPLYQQLKAEFPEVQAVNAMYTHGLLAIISTKKRYGGF
HHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECHHHHCCH
ARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFNLPQVMWALSSKVNPAGDLVQLPNMSVLE
HHHHCCEEECCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEECCCCEEEE
LDPGSSPAGITDKLIIDATTPVAPDNRGHYSQPVVDLPETKAWAEKLTAMLAARK
ECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AFDDLRSFLQALDDHGQLLKISEEVNAEPDLAAAANATGRIGDGAPALWFDNIRGFTDA
CHHHHHHHHHHHCCCCCEEEEHHHCCCCCCHHHHCCCCCCCCCCCCEEEECCCCCCCHH
RVAMNTIGSWQNHAISLGLPPNAPVKKQIDEFIRRWDNFPIAPERRANPAWAQNTVDGDE
HHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
INLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDNFGKQNVGIYRMEVKGKRKLGLQPV
EEHEEECEEEEEECCCCCEEECCEEEEECCCCCCCCCCCCCCCEEEEEECCCHHCCCCCC
PMHDIALHLHKAEERGEDLPIAITLGNDPIITLMGATPLKYDQSEYEMAGALRESPYPIA
CHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEE
TAPLTGFDVPWGSEVILEGVIESRKREIEGPFGEFTGHYSGGRNMTVVRIDKVSYRTRPI
ECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEEEEECCCCCCCHH
FESLYLGMPWTEIDYLMGPATCVPLYQQLKAEFPEVQAVNAMYTHGLLAIISTKKRYGGF
HHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECHHHHCCH
ARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFNLPQVMWALSSKVNPAGDLVQLPNMSVLE
HHHHCCEEECCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEECCCCEEEE
LDPGSSPAGITDKLIIDATTPVAPDNRGHYSQPVVDLPETKAWAEKLTAMLAARK
ECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA