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The map label for this gene is pad1 [H]

Identifier: 218696337

GI number: 218696337

Start: 3081803

End: 3082396

Strand: Reverse

Name: pad1 [H]

Synonym: EC55989_3010

Alternate gene names: 218696337

Gene position: 3082396-3081803 (Counterclockwise)

Preceding gene: 218696339

Following gene: 218696336

Centisome position: 59.8

GC content: 57.24

Gene sequence:

>594_bases
ATGAAACTGATCGTCGGGATGACAGGGGCTACCGGTGCGCCTCTTGGTGTGGCATTACTGCAAGCGCTGCGGGAGATGCC
GAATGTCGAGACTCATCTGGTGATGTCGAAGTGGGCGAAAACCACCATTGAACTGGAAACGCCTTACAGCGCTCGCGATG
TTGCTGCCCTCGCAGACTTCAGCCATAACCCGGCGGATCAGGCGGCGATCATCTCATCCGGTTCTTTTCGTACCGACGGC
ATGATCGTTATTCCGTGCAGTATGAAAACGCTCGCCGGTATCCGCGCTGGTTACGCCGATGGCCTGGTAGGGCGCGCGGC
GGACGTCGTGCTCAAAGAAGGCCGCAAACTGGTGCTGGTGCCGCGTGAAATGCCGCTTAGCACCATCCATCTCGAAAATA
TGCTCGCACTTTCACGCATGGGCGTGGCGATGGTGCCGCCGATGCCTGCCTTTTATAACCATCCCGAAACGGTAGATGAC
ATTGTCCACCATGTGGTAGCCCGCGTGCTGGATCAATTTGGCCTCGAACATCCCCACGCCAGGCGCTGGCAAGGATTGCC
GCAGGCCCGGAATTTTTCTCAGGAGAATGAATAA

Upstream 100 bases:

>100_bases
TGACGAAGAAGATGTTGTTACTTTTCAATCCTTGCCGCTGTGGAAATGAAGGAGTATGTTAATAATAACGTTCGTATACG
AACAATTAAGAGGATAAGCA

Downstream 100 bases:

>100_bases
TGGCATTTGATGATTTACGCAGCTTTTTACAGGCGCTTGATGACCACGGCCAGTTACTGAAAATCAGCGAAGAAGTGAAC
GCCGAGCCGGATCTGGCAGC

Product: conserved putative non-oxidative reversible hydroxyarylic acid decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWAKTTIELETPYSARDVAALADFSHNPADQAAIISSGSFRTDG
MIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDD
IVHHVVARVLDQFGLEHPHARRWQGLPQARNFSQENE

Sequences:

>Translated_197_residues
MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWAKTTIELETPYSARDVAALADFSHNPADQAAIISSGSFRTDG
MIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDD
IVHHVVARVLDQFGLEHPHARRWQGLPQARNFSQENE
>Mature_197_residues
MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWAKTTIELETPYSARDVAALADFSHNPADQAAIISSGSFRTDG
MIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDD
IVHHVVARVLDQFGLEHPHARRWQGLPQARNFSQENE

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=186, Percent_Identity=54.3010752688172, Blast_Score=205, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6320746, Length=185, Percent_Identity=54.0540540540541, Blast_Score=211, Evalue=7e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 21456; Mature: 21456

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWAKTTIELETPYSARDVAALADF
CEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHC
SHNPADQAAIISSGSFRTDGMIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLV
CCCCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHHCHHCCHHHHHHHHHHHCCCEEEEE
PREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDDIVHHVVARVLDQFGLEHPHA
CCCCCCHHHHHHHHHHHHHCCEEECCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
RRWQGLPQARNFSQENE
HHHCCCCHHHCCCCCCC
>Mature Secondary Structure
MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWAKTTIELETPYSARDVAALADF
CEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHC
SHNPADQAAIISSGSFRTDGMIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLV
CCCCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHHCHHCCHHHHHHHHHHHCCCEEEEE
PREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDDIVHHVVARVLDQFGLEHPHA
CCCCCCHHHHHHHHHHHHHCCEEECCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
RRWQGLPQARNFSQENE
HHHCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240 [H]