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The map label for this gene is yfcR [H]

Identifier: 218695935

GI number: 218695935

Start: 2650044

End: 2650658

Strand: Reverse

Name: yfcR [H]

Synonym: EC55989_2580

Alternate gene names: 218695935

Gene position: 2650658-2650044 (Counterclockwise)

Preceding gene: 218695936

Following gene: 218695934

Centisome position: 51.42

GC content: 47.97

Gene sequence:

>615_bases
ATGTCAACGACTATGGCGCTCGGATGCCGCTCTTTTTCACTTGCAACGGTAACAGTTGCCAGGTCGATGAAGAGCAGAGC
CGCAAAGGCTGAGGCCGGGAGAGCCAGTATGAAAGGATCTTGTTCTGTCTGGGCGGTAACTGGGTTACTGATATGTTGTG
TTGGTAGCGGCTTTGCAGTTGCAGCGAGTAAGTCAGTAAGTATGAATTTACGGGTGCTTGTCGATGCCCCTCCTCCTTGT
ACGGTAAATGGTGCGGCAGTTGAGTTTGGTAATGTATTCATTAATAAGATCAATGGGGTTGATTATAAACGTCCCATTGA
CTACTCGCTTGTTTGTAACAATCTGGCAATGGATGACCTGCGTCTACAGATGCAGGCGACAACGGTCGTGATTAACGGTG
AAACAGTTATCAGCACGGGGATTCCTGGGTTTGGTATTCGGGTTCAGAAAAGTAGTGATCACACAATACTCGACTTAACC
TCTGGCTCATGGTTGCCATTTAATTTTTCCTCGGGAGTTCCCGTTCTGGAAGCTGTGCCGGTGAAACAGAGTGGTACAAC
GTTAGCGGCAGCTGAATTTAACGCCAGTGCCACAATTGTGGTGGATTACCAATGA

Upstream 100 bases:

>100_bases
AAAAATGGCAATCCGGCAGCCGGTTTCTCGCCAATAGTGATGTCGCCGAAAACCTCTGCACCGCTGAATGTGAAGATGGG
TAGCGTGCCGGTACTGACCT

Downstream 100 bases:

>100_bases
AACGGATCTCGCTTATTTTGCTGTGGGGCTTTTGCTCGATGGCACTCTCAAACGTCTCTTTTCACGGTTATTTAGTGCAG
CCACCTAACTGCACGATTAG

Product: putative minor fimbrial subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MSTTMALGCRSFSLATVTVARSMKSRAAKAEAGRASMKGSCSVWAVTGLLICCVGSGFAVAASKSVSMNLRVLVDAPPPC
TVNGAAVEFGNVFINKINGVDYKRPIDYSLVCNNLAMDDLRLQMQATTVVINGETVISTGIPGFGIRVQKSSDHTILDLT
SGSWLPFNFSSGVPVLEAVPVKQSGTTLAAAEFNASATIVVDYQ

Sequences:

>Translated_204_residues
MSTTMALGCRSFSLATVTVARSMKSRAAKAEAGRASMKGSCSVWAVTGLLICCVGSGFAVAASKSVSMNLRVLVDAPPPC
TVNGAAVEFGNVFINKINGVDYKRPIDYSLVCNNLAMDDLRLQMQATTVVINGETVISTGIPGFGIRVQKSSDHTILDLT
SGSWLPFNFSSGVPVLEAVPVKQSGTTLAAAEFNASATIVVDYQ
>Mature_203_residues
STTMALGCRSFSLATVTVARSMKSRAAKAEAGRASMKGSCSVWAVTGLLICCVGSGFAVAASKSVSMNLRVLVDAPPPCT
VNGAAVEFGNVFINKINGVDYKRPIDYSLVCNNLAMDDLRLQMQATTVVINGETVISTGIPGFGIRVQKSSDHTILDLTS
GSWLPFNFSSGVPVLEAVPVKQSGTTLAAAEFNASATIVVDYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788676, Length=157, Percent_Identity=52.2292993630573, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1788675, Length=164, Percent_Identity=33.5365853658537, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 21320; Mature: 21189

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTMALGCRSFSLATVTVARSMKSRAAKAEAGRASMKGSCSVWAVTGLLICCVGSGFAV
CCCEEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEECCCCCEEE
AASKSVSMNLRVLVDAPPPCTVNGAAVEFGNVFINKINGVDYKRPIDYSLVCNNLAMDDL
EECCCEEEEEEEEEECCCCCEECCCEEEECEEEEEEECCCCCCCCCCCEEEECCCCCCCE
RLQMQATTVVINGETVISTGIPGFGIRVQKSSDHTILDLTSGSWLPFNFSSGVPVLEAVP
EEEEEEEEEEEECCEEEECCCCCCCEEEECCCCCEEEEECCCCEEEEECCCCCCEEEEEC
VKQSGTTLAAAEFNASATIVVDYQ
CCCCCCEEEEEECCCCEEEEEEEC
>Mature Secondary Structure 
STTMALGCRSFSLATVTVARSMKSRAAKAEAGRASMKGSCSVWAVTGLLICCVGSGFAV
CCEEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEECCCCCEEE
AASKSVSMNLRVLVDAPPPCTVNGAAVEFGNVFINKINGVDYKRPIDYSLVCNNLAMDDL
EECCCEEEEEEEEEECCCCCEECCCEEEECEEEEEEECCCCCCCCCCCEEEECCCCCCCE
RLQMQATTVVINGETVISTGIPGFGIRVQKSSDHTILDLTSGSWLPFNFSSGVPVLEAVP
EEEEEEEEEEEECCEEEECCCCCCCEEEECCCCCEEEEECCCCEEEEECCCCCCEEEEEC
VKQSGTTLAAAEFNASATIVVDYQ
CCCCCCEEEEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]