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The map label for this gene is ydcX

Identifier: 218694987

GI number: 218694987

Start: 1627146

End: 1627394

Strand: Direct

Name: ydcX

Synonym: EC55989_1578

Alternate gene names: 218694987

Gene position: 1627146-1627394 (Clockwise)

Preceding gene: 218694986

Following gene: 218694988

Centisome position: 31.57

GC content: 44.58

Gene sequence:

>249_bases
GTGAAAAAACTTGATGCACGTCAAAAAATGACGCATATTTGCGCGCGTTTTATTCATCTGCCTGGACGCCCGTACATGTC
TCTCTATCAACATATGCTTGTTTTTTATGCGGTTATGGCAGCAATCGCATTTCTTATCACCTGGTTTCTTTCTCACGATA
AGAAACGCATCCGTTTCTTAAGCGCCTTTCTGGTGGGGGCAACATGGCCGATGAGTTTCCCGGTGGCGCTGTTGTTTTCA
CTGTTTTAA

Upstream 100 bases:

>100_bases
TGCCCCTATGTGTATAGTACGGGTTAAGAAAATCCGCAATAATACTCATTCTGAAGATGGATAAGGGCAAGTTGCTGTTT
GATGATTTTTTCTCAAACTG

Downstream 100 bases:

>100_bases
ATCTTACTCACTGGCTTGACGGCACCACGCAGACTTATATCATTTGGATGAATCGATAAATTTCACAAGTGGTTAAGGAG
AAAGTATGTCGCATCTGGAT

Product: conserved hypothetical protein; putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKKLDARQKMTHICARFIHLPGRPYMSLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFLSAFLVGATWPMSFPVALLFS
LF

Sequences:

>Translated_82_residues
MKKLDARQKMTHICARFIHLPGRPYMSLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFLSAFLVGATWPMSFPVALLFS
LF
>Mature_82_residues
MKKLDARQKMTHICARFIHLPGRPYMSLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFLSAFLVGATWPMSFPVALLFS
LF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjdO [H]

Homologues:

Organism=Escherichia coli, GI87081912, Length=57, Percent_Identity=100, Blast_Score=113, Evalue=2e-27,
Organism=Escherichia coli, GI87082373, Length=57, Percent_Identity=63.1578947368421, Blast_Score=79, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019689 [H]

Pfam domain/function: PF10753 DUF2566 [H]

EC number: NA

Molecular weight: Translated: 9640; Mature: 9640

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLDARQKMTHICARFIHLPGRPYMSLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFL
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SAFLVGATWPMSFPVALLFSLF
HHHHHHHCCCHHHHHHHHHHHC
>Mature Secondary Structure
MKKLDARQKMTHICARFIHLPGRPYMSLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFL
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SAFLVGATWPMSFPVALLFSLF
HHHHHHHCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]