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The map label for this gene is ymfA [H]

Identifier: 218694655

GI number: 218694655

Start: 1291412

End: 1291882

Strand: Reverse

Name: ymfA [H]

Synonym: EC55989_1234

Alternate gene names: 218694655

Gene position: 1291882-1291412 (Counterclockwise)

Preceding gene: 218694656

Following gene: 218694654

Centisome position: 25.06

GC content: 42.68

Gene sequence:

>471_bases
ATGTGGCTAATGAGTCAGGACAGTAAAGTTTTATCCCGCGCTTTTCTCGGTATCGGTCTGATATTGCTCGTTATTTCTGC
AATCATCTTTTATTACCATTTTACTTTTACCAAAAGCGCGGTTCATACAGAAGGAATCATTGTTGATGCCGTTTGGTACA
ACAATCACTCAAACGACGTCGATGATAATGGTTCCTGGTATCCAGTGGTTGCCTTTCGCCCTACGCCAGATTACACGCTA
ATTTTCAATTCGAATATCGGTAGTGATTTTTATGAAGATAGCGAAGGTGACAGAGTCAATGTCTATTATCCGCCAGGGCA
TCCAGAACAAGCCGAAATAAACAATCCCTGGGTTAATTTTTTTAAATGGGGCTTTGTTGGCATAGCAGGCATTATTTTCG
GTAGTGTCGGTCTGATAATCACGCTCCCCTCCACCAAAAAATCTCGCAGGAAACGGAAGTCCCGCCCATAA

Upstream 100 bases:

>100_bases
AGCCAGCAGCATTTATGAAGAGTATTATCAGAAGCTGAAAGCAGGACGTTAATTCAGCAAACGGGCGGTGGTATTACCGC
CCGTTTTTTAGTTAGCAAGG

Downstream 100 bases:

>100_bases
AAAAATTCATTATACTGCTCAGTTTACTGATACTCCTGCCTCTGGTAGCAACCAGTAAACCATTGATTCCAATAATGAAG
ACACTTTTTACGGATGTTAC

Product: Conserved hypothetical protein: Inner membrane protein ymfA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MWLMSQDSKVLSRAFLGIGLILLVISAIIFYYHFTFTKSAVHTEGIIVDAVWYNNHSNDVDDNGSWYPVVAFRPTPDYTL
IFNSNIGSDFYEDSEGDRVNVYYPPGHPEQAEINNPWVNFFKWGFVGIAGIIFGSVGLIITLPSTKKSRRKRKSRP

Sequences:

>Translated_156_residues
MWLMSQDSKVLSRAFLGIGLILLVISAIIFYYHFTFTKSAVHTEGIIVDAVWYNNHSNDVDDNGSWYPVVAFRPTPDYTL
IFNSNIGSDFYEDSEGDRVNVYYPPGHPEQAEINNPWVNFFKWGFVGIAGIIFGSVGLIITLPSTKKSRRKRKSRP
>Mature_156_residues
MWLMSQDSKVLSRAFLGIGLILLVISAIIFYYHFTFTKSAVHTEGIIVDAVWYNNHSNDVDDNGSWYPVVAFRPTPDYTL
IFNSNIGSDFYEDSEGDRVNVYYPPGHPEQAEINNPWVNFFKWGFVGIAGIIFGSVGLIITLPSTKKSRRKRKSRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081835, Length=140, Percent_Identity=72.8571428571428, Blast_Score=225, Evalue=8e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021994 [H]

Pfam domain/function: PF12158 DUF3592 [H]

EC number: NA

Molecular weight: Translated: 17741; Mature: 17741

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLMSQDSKVLSRAFLGIGLILLVISAIIFYYHFTFTKSAVHTEGIIVDAVWYNNHSNDV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCC
DDNGSWYPVVAFRPTPDYTLIFNSNIGSDFYEDSEGDRVNVYYPPGHPEQAEINNPWVNF
CCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHH
FKWGFVGIAGIIFGSVGLIITLPSTKKSRRKRKSRP
HHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCC
>Mature Secondary Structure
MWLMSQDSKVLSRAFLGIGLILLVISAIIFYYHFTFTKSAVHTEGIIVDAVWYNNHSNDV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCC
DDNGSWYPVVAFRPTPDYTLIFNSNIGSDFYEDSEGDRVNVYYPPGHPEQAEINNPWVNF
CCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHH
FKWGFVGIAGIIFGSVGLIITLPSTKKSRRKRKSRP
HHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]