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The map label for this gene is ycfZ

Identifier: 218694654

GI number: 218694654

Start: 1290627

End: 1291349

Strand: Reverse

Name: ycfZ

Synonym: EC55989_1233

Alternate gene names: 218694654

Gene position: 1291349-1290627 (Counterclockwise)

Preceding gene: 218694655

Following gene: 218694648

Centisome position: 25.05

GC content: 42.88

Gene sequence:

>723_bases
TTGATTCCAATAATGAAGACACTTTTTACGGATGTTACCGGTACTGTACCGGATGCTGAAGAGATCGCACGTAAAGCCGA
GCTTTTTCGCCAACAAACGGGAATTGCACCGTTTATTGTGATTTTACCCGACATTAATAATGAAGCCAGTCTCAGACAAA
ATGGTAAAGCGATGCTGGCGCATGCGTCATCTTCATTGAGTAATGTAAAAGGAAGTGTTCTGTTACTATTTACTACCCGC
GAACCACGGTTAATTATGATCACCAACGGCCAGGTTGAAAGTGGTCTGGACGATAAACATCTCGGCCTTCTGATAGAAAA
TCACACGCTGGCTTATTTAAATGCAGATCTCTGGTATCAGGGAATCAATAATGCATTGGCTGTTCTACAAGCACAGATAT
TAAAACAACCGACGCCGCCACTGACGTATTATCCGCATCCAGGACAACAGCATGAAAATGCTCCCCCCGGCAGCACCAAC
ACATTAGGTTTTATCGCCTGGGCTGCGACGTTTATCTTATTTTCCTGGATCTTTTGCTACACGACTCGTTTTATTTATGC
GTTAAAATTTGCAGTGGCGATGACTATTGCCAATATGGGTTATCAGGCTTTATGTTTGTATATCGATAATAGCTTTGCGA
TTACCAGAATATCGCCACTCTGGGCAGGGCTAATTGGTGTCTGTACGTTTATTGCCGCATTGTTATTGACGAGTAAACGA
TAA

Upstream 100 bases:

>100_bases
CCAAAAAATCTCGCAGGAAACGGAAGTCCCGCCCATAAAAAAATTCATTATACTGCTCAGTTTACTGATACTCCTGCCTC
TGGTAGCAACCAGTAAACCA

Downstream 100 bases:

>100_bases
AAGAGGCCGGAAAAGTGCGCGTGTATTATGCCGGATGGGGCGCGAACGCCTTATCCGGCCCACAAAACCCGCAAATTCAA
TTAATTGCGTCCCCTTGTAG

Product: conserved hypothetical protein; putative inner membrane protein

Products: nicotinate; N1-(5-phospho-alpha-D-ribosyl)-5,6-dimethylbenzimidazole

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MIPIMKTLFTDVTGTVPDAEEIARKAELFRQQTGIAPFIVILPDINNEASLRQNGKAMLAHASSSLSNVKGSVLLLFTTR
EPRLIMITNGQVESGLDDKHLGLLIENHTLAYLNADLWYQGINNALAVLQAQILKQPTPPLTYYPHPGQQHENAPPGSTN
TLGFIAWAATFILFSWIFCYTTRFIYALKFAVAMTIANMGYQALCLYIDNSFAITRISPLWAGLIGVCTFIAALLLTSKR

Sequences:

>Translated_240_residues
MIPIMKTLFTDVTGTVPDAEEIARKAELFRQQTGIAPFIVILPDINNEASLRQNGKAMLAHASSSLSNVKGSVLLLFTTR
EPRLIMITNGQVESGLDDKHLGLLIENHTLAYLNADLWYQGINNALAVLQAQILKQPTPPLTYYPHPGQQHENAPPGSTN
TLGFIAWAATFILFSWIFCYTTRFIYALKFAVAMTIANMGYQALCLYIDNSFAITRISPLWAGLIGVCTFIAALLLTSKR
>Mature_240_residues
MIPIMKTLFTDVTGTVPDAEEIARKAELFRQQTGIAPFIVILPDINNEASLRQNGKAMLAHASSSLSNVKGSVLLLFTTR
EPRLIMITNGQVESGLDDKHLGLLIENHTLAYLNADLWYQGINNALAVLQAQILKQPTPPLTYYPHPGQQHENAPPGSTN
TLGFIAWAATFILFSWIFCYTTRFIYALKFAVAMTIANMGYQALCLYIDNSFAITRISPLWAGLIGVCTFIAALLLTSKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787365, Length=240, Percent_Identity=97.0833333333333, Blast_Score=479, Evalue=1e-137,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.4.2.21

Molecular weight: Translated: 26489; Mature: 26489

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPIMKTLFTDVTGTVPDAEEIARKAELFRQQTGIAPFIVILPDINNEASLRQNGKAMLA
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHCCCEEEE
HASSSLSNVKGSVLLLFTTREPRLIMITNGQVESGLDDKHLGLLIENHTLAYLNADLWYQ
ECHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCEEEEEEHHHHHH
GINNALAVLQAQILKQPTPPLTYYPHPGQQHENAPPGSTNTLGFIAWAATFILFSWIFCY
HHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TTRFIYALKFAVAMTIANMGYQALCLYIDNSFAITRISPLWAGLIGVCTFIAALLLTSKR
HHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIPIMKTLFTDVTGTVPDAEEIARKAELFRQQTGIAPFIVILPDINNEASLRQNGKAMLA
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHCCCEEEE
HASSSLSNVKGSVLLLFTTREPRLIMITNGQVESGLDDKHLGLLIENHTLAYLNADLWYQ
ECHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCEEEEEEHHHHHH
GINNALAVLQAQILKQPTPPLTYYPHPGQQHENAPPGSTNTLGFIAWAATFILFSWIFCY
HHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TTRFIYALKFAVAMTIANMGYQALCLYIDNSFAITRISPLWAGLIGVCTFIAALLLTSKR
HHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: beta-nicotinate D-ribonucleotide; dimethylbenzimidazole

Specific reaction: beta-nicotinate D-ribonucleotide + dimethylbenzimidazole = nicotinate + N1-(5-phospho-alpha-D-ribosyl)-5,6-dimethylbenzimidazole

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]