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The map label for this gene is ybjT

Identifier: 218694343

GI number: 218694343

Start: 968204

End: 969634

Strand: Reverse

Name: ybjT

Synonym: EC55989_0914

Alternate gene names: 218694343

Gene position: 969634-968204 (Counterclockwise)

Preceding gene: 218694344

Following gene: 218694342

Centisome position: 18.81

GC content: 54.86

Gene sequence:

>1431_bases
GTGCCGCAACGCATTTTAGTTCTCGGTGCCAGTGGCTACATTGGTCAGCATCTGGTGCGCACACTCAGCCAGCAAGGGCA
TCAGATCCTGGCGGCGGCACGTCATGTCGACAGGCTTGCAAAGCTGCAACTGGCAAACGTCAGTTGCCATAAAGTCGATC
TCAGCTGGCCGGATAACCTTCCGGCCCTGTTGCAGGATATCGATACCGTCTATTTTCTGGTGCACAGCATGGGCGAAGGC
GGCGATTTTATCGCTCAGGAGCGCCAGGTGGCTCTCAACGTCCGCGATGCGCTACGTGAAGTACCAGTTAAGCAATTAAT
CTTTCTCAGTTCGTTGCAGGCCCCGCCACATGAGCAGTCGGATCATCTGCGTGCTCGTCAGGCTACGGCGGACATTCTTC
GTGAAGCGAATGTACCTGTGACCGAACTTCGGGCCGGAATTATCGTTGGCGCAGGTTCAGCGGCGTTCGAAGTCATGCGC
GATATGGTCTACAACCTGCCAGTGTTAACGCCGCCACGCTGGGTACGTTCACGCACCACGCCCATCGCGCTGGAAAACTT
GCTGCACTATCTGGTGGCGTTGTTAGATCATCCGGCCAGCGAACACCGCATCTTCGAAGCCGCCGGACCAGAGGTGCTCA
GTTATCAGCAACAGTTTGAACATTTTATGGCGGTGAGCGGTAAGCGCCGCTGGTTGATCCCCATCCCCCTCCCCACCCGC
TGGATTTCGGTGTGGTTTCTCAATGTGATTACTTCCGTACCGCCCACCACCGCCAGGGCGTTGATTCAGGGGCTGAAACA
CGATCTGCTGGCGGATGATACCGCGCTACGTGCACTCATCCCACAACGGCTGATCGCTTTCGATGACGCGGTACGTAGCA
CGTTGAAAGAGGAGGAAAAACTGGTCAACTCCAGCGACTGGGGCTACGACGCTCAGGCCTTTGCCCGCTGGCGACCGGAG
TACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCTTTATGGCAGGTAGTGAACCA
AATCGGCGGTAAAGAGCGTTATTTCTTTGGCAATATTTTGTGGCAGACACGGGCGTTGATGGACCGCGCGATCGGTCATA
AGCTGGCGAAAGGCCGCCCGGAGCGCGAATATTTACAGACTGGCGATGCGGTAGATAGCTGGAAAGTGATTGTCGTTGAA
CCGGAAAAACAACTTACGTTGTTATTTGGCATGAAAGCGCCGGGGCTGGGACGACTGTGTTTTAGCCTGGAAGATAAAGG
CGACTATCGTACTATCGATGTCCGCGCTTTCTGGCATCCGCACGGTATGCCGGGGCTGTTTTACTGGTTATTGATGATCC
CCGCGCATCTGTTTATTTTTCGCGGAATGGCAAAACAAATCGCCAGACTGGCAGAACAAAGCACAGATTAA

Upstream 100 bases:

>100_bases
CCGATTGTCCGCCTGGTGACGCATCTTGACGTCTCGCGCGAACAACTGGCGGAAGTCGCCGCCCACTGGCGCGCATTCCT
GGCGCGTTAAGGAGAGAGAC

Downstream 100 bases:

>100_bases
TCGACAAAACCTGCGTTATTCTTTCATGTTTCCCATTGCATCATGGGGGAAATCACGGAAGAATGCGCACGTTATTTTCT
CAACAACAGTGGATTGATAT

Product: conserved hypothetical protein; putative NAD(P)-binding Rossmann-fold domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEG
GDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMR
DMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPLPTR
WISVWFLNVITSVPPTTARALIQGLKHDLLADDTALRALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPE
YGYFAKQAGFTVKTSASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIVVE
PEKQLTLLFGMKAPGLGRLCFSLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKQIARLAEQSTD

Sequences:

>Translated_476_residues
MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEG
GDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMR
DMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPLPTR
WISVWFLNVITSVPPTTARALIQGLKHDLLADDTALRALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPE
YGYFAKQAGFTVKTSASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIVVE
PEKQLTLLFGMKAPGLGRLCFSLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKQIARLAEQSTD
>Mature_475_residues
PQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGG
DFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMRD
MVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPLPTRW
ISVWFLNVITSVPPTTARALIQGLKHDLLADDTALRALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPEY
GYFAKQAGFTVKTSASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIVVEP
EKQLTLLFGMKAPGLGRLCFSLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKQIARLAEQSTD

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=476, Percent_Identity=100, Blast_Score=974, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBJT_ECOLI (P75822)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   E64825
- RefSeq:   AP_001500.1
- RefSeq:   NP_415390.4
- ProteinModelPortal:   P75822
- SMR:   P75822
- STRING:   P75822
- EnsemblBacteria:   EBESCT00000000593
- EnsemblBacteria:   EBESCT00000014532
- GeneID:   945496
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5116
- KEGG:   eco:b0869
- EchoBASE:   EB3453
- EcoGene:   EG13689
- eggNOG:   COG0702
- GeneTree:   EBGT00050000011902
- HOGENOM:   HBG578487
- OMA:   GLLYWFA
- ProtClustDB:   CLSK879800
- BioCyc:   EcoCyc:G6454-MONOMER
- Genevestigator:   P75822
- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040
- Gene3D:   G3DSA:3.40.50.720

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase

EC number: NA

Molecular weight: Translated: 53708; Mature: 53577

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNL
CCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
PALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCH
DHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTT
HHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHCCCC
PIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPLPTR
HHHHHHHHHHHHHHHCCCCHHCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHH
WISVWFLNVITSVPPTTARALIQGLKHDLLADDTALRALIPQRLIAFDDAVRSTLKEEEK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKTSASLAALWQVVNQIGGKERYFFGNIL
HCCCCCCCCCHHHHHHCCCCCCCHHHHCCCEEECCHHHHHHHHHHHHHCCCCEEEHHHHH
WQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIVVEPEKQLTLLFGMKAPGLGRLC
HHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCEE
FSLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKQIARLAEQSTD
EEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNL
CCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
PALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCH
DHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTT
HHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHCCCC
PIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPLPTR
HHHHHHHHHHHHHHHCCCCHHCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHH
WISVWFLNVITSVPPTTARALIQGLKHDLLADDTALRALIPQRLIAFDDAVRSTLKEEEK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKTSASLAALWQVVNQIGGKERYFFGNIL
HCCCCCCCCCHHHHHHCCCCCCCHHHHCCCEEECCHHHHHHHHHHHHHCCCCEEEHHHHH
WQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIVVEPEKQLTLLFGMKAPGLGRLC
HHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCEE
FSLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKQIARLAEQSTD
EEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503