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The map label for this gene is ybbD [H]

Identifier: 218693964

GI number: 218693964

Start: 556534

End: 557025

Strand: Direct

Name: ybbD [H]

Synonym: EC55989_0515

Alternate gene names: 218693964

Gene position: 556534-557025 (Clockwise)

Preceding gene: 218693963

Following gene: 218693969

Centisome position: 10.8

GC content: 34.96

Gene sequence:

>492_bases
ATGCTGGCTATCTCAAGTAACATCTCAAAGATGGTAATATTTATTTTTGCTATTATAATCGTTGTTTTTTTATGCGTGAC
TACTTATCTTTATTTACACAAAGATGAATCTCTTGTAAGTAAGCATTACATAAACTATATGGCAATACCAGAAAGTGATG
GAGTTTTTACATGGCTCCCAGATTTTTTTCCGCACGTAGCGGTGGATATATCAATATCCACAAATGTAGAAGATGATTAT
TTTTTTTCTTATTTTTCCCTAACAATCGATGATGGGGGGAGGTTTAAGAAAACATTGACGGTGAGGGCCAGGGAACAAGT
GGCGAAAATCGTATCAGAGAATGATCCAGATACAAAAAAAGTGTGGTGTAAATATGGTAAAATACCAGGGCAAGGGGATA
GCGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCATTATTTTATAACAAATATTGGAGCTGGATTGCCTGATGCT
TGTGCAGAGTAA

Upstream 100 bases:

>100_bases
AATGAACATGGGTTGACATGTCCATTAACACAAGATTGCTCAAATAGATGTATTGATTATATTAATCCAGAGCATAAAAA
AACGATAAAGGCTTTACAAG

Downstream 100 bases:

>100_bases
TTGCTTGAATTAAGAGTCTATCCCATATCGAAGTCGTCAACTTCGTAGTGAGGAAAAGTAAAATTCCTGACTGAGAAAAG
ACATGTCGGCTATTGTGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MLAISSNISKMVIFIFAIIIVVFLCVTTYLYLHKDESLVSKHYINYMAIPESDGVFTWLPDFFPHVAVDISISTNVEDDY
FFSYFSLTIDDGGRFKKTLTVRAREQVAKIVSENDPDTKKVWCKYGKIPGQGDSVNLFFVGEINVTHYFITNIGAGLPDA
CAE

Sequences:

>Translated_163_residues
MLAISSNISKMVIFIFAIIIVVFLCVTTYLYLHKDESLVSKHYINYMAIPESDGVFTWLPDFFPHVAVDISISTNVEDDY
FFSYFSLTIDDGGRFKKTLTVRAREQVAKIVSENDPDTKKVWCKYGKIPGQGDSVNLFFVGEINVTHYFITNIGAGLPDA
CAE
>Mature_163_residues
MLAISSNISKMVIFIFAIIIVVFLCVTTYLYLHKDESLVSKHYINYMAIPESDGVFTWLPDFFPHVAVDISISTNVEDDY
FFSYFSLTIDDGGRFKKTLTVRAREQVAKIVSENDPDTKKVWCKYGKIPGQGDSVNLFFVGEINVTHYFITNIGAGLPDA
CAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18384; Mature: 18384

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAISSNISKMVIFIFAIIIVVFLCVTTYLYLHKDESLVSKHYINYMAIPESDGVFTWLP
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCCCEEEECC
DFFPHVAVDISISTNVEDDYFFSYFSLTIDDGGRFKKTLTVRAREQVAKIVSENDPDTKK
CCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHCCCCCCHHH
VWCKYGKIPGQGDSVNLFFVGEINVTHYFITNIGAGLPDACAE
HHEECCCCCCCCCEEEEEEEEEECEEEEEEECCCCCCCHHHCC
>Mature Secondary Structure
MLAISSNISKMVIFIFAIIIVVFLCVTTYLYLHKDESLVSKHYINYMAIPESDGVFTWLP
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCCCEEEECC
DFFPHVAVDISISTNVEDDYFFSYFSLTIDDGGRFKKTLTVRAREQVAKIVSENDPDTKK
CCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHCCCCCCHHH
VWCKYGKIPGQGDSVNLFFVGEINVTHYFITNIGAGLPDACAE
HHEECCCCCCCCCEEEEEEEEEECEEEEEEECCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766878; 9278503 [H]