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The map label for this gene is ylbH

Identifier: 218693963

GI number: 218693963

Start: 555843

End: 556553

Strand: Direct

Name: ylbH

Synonym: EC55989_0514

Alternate gene names: 218693963

Gene position: 555843-556553 (Clockwise)

Preceding gene: 218693962

Following gene: 218693964

Centisome position: 10.78

GC content: 43.6

Gene sequence:

>711_bases
ATGCTGGCGCTGATGGATGCGGATGGAAACATTGCGTGGAGCGGGGAGTATGATGAGTGGGGCAACCAGCTGAATGAAGA
GAACCCGCATCACCTGCACCAGCCGTACCGGCTGCCGGGGCAGCAGTATGATAAGGAGTCGGGGCTGTACTACAACCGGA
ACCGGTACTACGATCCGTTGCAGGGGCGGTATATCACTCAGGACCCGATAGGGCTGGAGGGGGGATGGAGTCTGTATGCG
TATCCGCTGAATCCGGTGAATGGTATTGATCCATTAGGGTTAAGTCCTGCAGATGTAGCGTTAATGCGAAAAAAAGAACA
ACTAAACCATCAAAGAGCATGGGATATATTATCTGATACTTATGATGATATGAAGAGATTAAATTTAGGTGGGACTGATC
AATTTTTCCATTGTATGGCATTTTGTCGAGTGTCTAAATTAAATGACGCTGGTGTTAGCCGATCAGCGAAAGGGCTGGGT
TATGAAAAAGAGATTAGAGATTACGGGTTAAATATGTTCGGTATGTACGGCAGAAAAGTAAAGTTATCCCATTCTGAGAT
GATTGAAGATAATAAAAAAGACTTGGCTGTAAATGAACATGGGTTGACATGTCCATTAACACAAGATTGCTCAAATAGAT
GTATTGATTATATTAATCCAGAGCATAAAAAAACGATAAAGGCTTTACAAGATGCTGGCTATCTCAAGTAA

Upstream 100 bases:

>100_bases
TTGAGGGAGCAAAGTTACCTTATGAAGTTGCGGGTGGTGTATTTATTATAGAAATTAATAAGAAAAATGGATGTGTTTTG
AATTTCCTACATAGTAAATA

Downstream 100 bases:

>100_bases
CATCTCAAAGATGGTAATATTTATTTTTGCTATTATAATCGTTGTTTTTTTATGCGTGACTACTTATCTTTATTTACACA
AAGATGAATCTCTTGTAAGT

Product: conserved hypothetical protein; putative rhs-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MLALMDADGNIAWSGEYDEWGNQLNEENPHHLHQPYRLPGQQYDKESGLYYNRNRYYDPLQGRYITQDPIGLEGGWSLYA
YPLNPVNGIDPLGLSPADVALMRKKEQLNHQRAWDILSDTYDDMKRLNLGGTDQFFHCMAFCRVSKLNDAGVSRSAKGLG
YEKEIRDYGLNMFGMYGRKVKLSHSEMIEDNKKDLAVNEHGLTCPLTQDCSNRCIDYINPEHKKTIKALQDAGYLK

Sequences:

>Translated_236_residues
MLALMDADGNIAWSGEYDEWGNQLNEENPHHLHQPYRLPGQQYDKESGLYYNRNRYYDPLQGRYITQDPIGLEGGWSLYA
YPLNPVNGIDPLGLSPADVALMRKKEQLNHQRAWDILSDTYDDMKRLNLGGTDQFFHCMAFCRVSKLNDAGVSRSAKGLG
YEKEIRDYGLNMFGMYGRKVKLSHSEMIEDNKKDLAVNEHGLTCPLTQDCSNRCIDYINPEHKKTIKALQDAGYLK
>Mature_236_residues
MLALMDADGNIAWSGEYDEWGNQLNEENPHHLHQPYRLPGQQYDKESGLYYNRNRYYDPLQGRYITQDPIGLEGGWSLYA
YPLNPVNGIDPLGLSPADVALMRKKEQLNHQRAWDILSDTYDDMKRLNLGGTDQFFHCMAFCRVSKLNDAGVSRSAKGLG
YEKEIRDYGLNMFGMYGRKVKLSHSEMIEDNKKDLAVNEHGLTCPLTQDCSNRCIDYINPEHKKTIKALQDAGYLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI1786706, Length=93, Percent_Identity=80.6451612903226, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1786917, Length=93, Percent_Identity=76.3440860215054, Blast_Score=158, Evalue=3e-40,
Organism=Escherichia coli, GI48994942, Length=94, Percent_Identity=76.5957446808511, Blast_Score=158, Evalue=4e-40,
Organism=Escherichia coli, GI1790020, Length=93, Percent_Identity=75.2688172043011, Blast_Score=155, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385 [H]

Pfam domain/function: PF03527 RHS [H]

EC number: NA

Molecular weight: Translated: 27061; Mature: 27061

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALMDADGNIAWSGEYDEWGNQLNEENPHHLHQPYRLPGQQYDKESGLYYNRNRYYDPL
CEEEEECCCCEEECCCHHHHHHHCCCCCCHHCCCCCCCCCHHCCCCCCEEECCCCCCCCC
QGRYITQDPIGLEGGWSLYAYPLNPVNGIDPLGLSPADVALMRKKEQLNHQRAWDILSDT
CCCEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YDDMKRLNLGGTDQFFHCMAFCRVSKLNDAGVSRSAKGLGYEKEIRDYGLNMFGMYGRKV
HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCEE
KLSHSEMIEDNKKDLAVNEHGLTCPLTQDCSNRCIDYINPEHKKTIKALQDAGYLK
ECCHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLALMDADGNIAWSGEYDEWGNQLNEENPHHLHQPYRLPGQQYDKESGLYYNRNRYYDPL
CEEEEECCCCEEECCCHHHHHHHCCCCCCHHCCCCCCCCCHHCCCCCCEEECCCCCCCCC
QGRYITQDPIGLEGGWSLYAYPLNPVNGIDPLGLSPADVALMRKKEQLNHQRAWDILSDT
CCCEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YDDMKRLNLGGTDQFFHCMAFCRVSKLNDAGVSRSAKGLGYEKEIRDYGLNMFGMYGRKV
HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCEE
KLSHSEMIEDNKKDLAVNEHGLTCPLTQDCSNRCIDYINPEHKKTIKALQDAGYLK
ECCHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]