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The map label for this gene is yjfN

Identifier: 218692521

GI number: 218692521

Start: 4933701

End: 4933976

Strand: Reverse

Name: yjfN

Synonym: ECED1_4975

Alternate gene names: 218692521

Gene position: 4933976-4933701 (Counterclockwise)

Preceding gene: 218692522

Following gene: 218692500

Centisome position: 94.71

GC content: 51.09

Gene sequence:

>276_bases
ATGAAACAATTACTTGCCTCACCCTCGCTGCAATTAGTTACTTATCCTGCGAGCGCCACGGCACAGTCTGCAGAATTCGC
CAGTGCTGACTGCGTGACGGGCCTGAATGAAATAGGTCAGATCTCAGTTAGCAATATTTCAGGGGATCCGCAGGACGTGG
AACGTATCGTGGCGTTAAAGGCCGATGAACAAGGTGCGTCATGGTACCGCATTATTACCATGTACGAAGACCAGCAGCCT
GATAACTGGCGCGTACAGGCGATACTGTATGCGTGA

Upstream 100 bases:

>100_bases
GTTTACCTGTGCACAATAAATTACCGGCTGGAAGCTCGGGCGTTTATTACCGCGATGGAATGCCCTGCAACATGTGGGGA
AACGAAAAATGGAGCTGACG

Downstream 100 bases:

>100_bases
GTGTCATCTACAGCAAATGAACAATGCCGGATGCGGCGCGAGCGCCTTGTCCGGCCTACAATTTTAAAATATTTCATTTA
GTTAATCGAAACCAGCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERIVALKADEQGASWYRIITMYEDQQP
DNWRVQAILYA

Sequences:

>Translated_91_residues
MKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERIVALKADEQGASWYRIITMYEDQQP
DNWRVQAILYA
>Mature_91_residues
MKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERIVALKADEQGASWYRIITMYEDQQP
DNWRVQAILYA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BhsA/McbA family

Homologues:

Organism=Escherichia coli, GI87082385, Length=91, Percent_Identity=100, Blast_Score=186, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJFN_ECO57 (P0AF84)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- RefSeq:   NP_290818.1
- RefSeq:   NP_313191.2
- ProteinModelPortal:   P0AF84
- SMR:   P0AF84
- EnsemblBacteria:   EBESCT00000028059
- EnsemblBacteria:   EBESCT00000056456
- GeneID:   914015
- GeneID:   959935
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z5795
- KEGG:   ecs:ECs5164
- GeneTree:   EBGT00050000011124
- HOGENOM:   HBG677470
- OMA:   YEEQQPD
- ProtClustDB:   CLSK880863
- BioCyc:   ECOL83334:ECS5164-MONOMER
- InterPro:   IPR009923
- InterPro:   IPR010854
- Gene3D:   G3DSA:3.30.1660.10

Pfam domain/function: PF07338 DUF1471

EC number: NA

Molecular weight: Translated: 9949; Mature: 9949

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERIVALK
CCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHHCEEEEECCCCCHHHHHHEEEEC
ADEQGASWYRIITMYEDQQPDNWRVQAILYA
CCCCCCCEEEEEEEECCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERIVALK
CCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHHCEEEEECCCCCHHHHHHEEEEC
ADEQGASWYRIITMYEDQQPDNWRVQAILYA
CCCCCCCEEEEEEEECCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796