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The map label for this gene is yjfO [H]

Identifier: 218692522

GI number: 218692522

Start: 4934125

End: 4934454

Strand: Reverse

Name: yjfO [H]

Synonym: ECED1_4976

Alternate gene names: 218692522

Gene position: 4934454-4934125 (Counterclockwise)

Preceding gene: 218692524

Following gene: 218692521

Centisome position: 94.72

GC content: 49.09

Gene sequence:

>330_bases
ATGGTTAGCAGGAAACGTAATAGCGTTATTTACCGGTTTGCCAGTTTATTATTGGTGTTGATGTTAAGTGCCTGTAGCGC
ACTGCAAGGTACGCCACAGCCAGCACCGCCAGTAACGGACCATCCGCAAGAGATTCGCCGCGACCAGACGCAAGGGTTAC
AGCGAATAGGTAGCGTAAGCACGATGGTTCGGGGTTCTCCGGATGACGCATTAGCAGAAATCAGAGCGAAAGCTGTCGCT
GCAAAAGCTGATTATTACGTTGTCGTCATGGTGGACGAAACCATCGTGACAGGACAGTGGTATTCACAAGCCATTTTGTA
CCGTAAATAA

Upstream 100 bases:

>100_bases
GATGTGGGTTACGCTTTCGTCACGTTTTCATTCGAAAATCGCGTACCAGGTAACAATTCGGGAACATTCCCCCAAAGTTA
AATTAATAAGGCACTACACT

Downstream 100 bases:

>100_bases
ATCAGACAACTTACATAGTCAGCTTTACATTGCTTTGCGTCCCTATGCGTTTACCTGTGCACAATAAATTACCGGCTGGA
AGCTCGGGCGTTTATTACCG

Product: putative biofilm stress and motility protein A

Products: NA

Alternate protein names: Biofilm stress and motility protein [H]

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MVSRKRNSVIYRFASLLLVLMLSACSALQGTPQPAPPVTDHPQEIRRDQTQGLQRIGSVSTMVRGSPDDALAEIRAKAVA
AKADYYVVVMVDETIVTGQWYSQAILYRK

Sequences:

>Translated_109_residues
MVSRKRNSVIYRFASLLLVLMLSACSALQGTPQPAPPVTDHPQEIRRDQTQGLQRIGSVSTMVRGSPDDALAEIRAKAVA
AKADYYVVVMVDETIVTGQWYSQAILYRK
>Mature_109_residues
MVSRKRNSVIYRFASLLLVLMLSACSALQGTPQPAPPVTDHPQEIRRDQTQGLQRIGSVSTMVRGSPDDALAEIRAKAVA
AKADYYVVVMVDETIVTGQWYSQAILYRK

Specific function: Involved in protection of biofilms against oxidative stress [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BhsA/McbA family [H]

Homologues:

Organism=Escherichia coli, GI87082386, Length=109, Percent_Identity=99.0825688073395, Blast_Score=222, Evalue=5e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009923
- InterPro:   IPR010854 [H]

Pfam domain/function: PF07338 DUF1471 [H]

EC number: NA

Molecular weight: Translated: 12066; Mature: 12066

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSRKRNSVIYRFASLLLVLMLSACSALQGTPQPAPPVTDHPQEIRRDQTQGLQRIGSVS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TMVRGSPDDALAEIRAKAVAAKADYYVVVMVDETIVTGQWYSQAILYRK
HHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCHHHHHHHCCC
>Mature Secondary Structure
MVSRKRNSVIYRFASLLLVLMLSACSALQGTPQPAPPVTDHPQEIRRDQTQGLQRIGSVS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TMVRGSPDDALAEIRAKAVAAKADYYVVVMVDETIVTGQWYSQAILYRK
HHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]