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The map label for this gene is yidR [H]

Identifier: 218691977

GI number: 218691977

Start: 4305573

End: 4306787

Strand: Reverse

Name: yidR [H]

Synonym: ECED1_4380

Alternate gene names: 218691977

Gene position: 4306787-4305573 (Counterclockwise)

Preceding gene: 218691979

Following gene: 218691975

Centisome position: 82.67

GC content: 53.17

Gene sequence:

>1215_bases
ATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGT
GTTTGACGTGCGGCCTTCTGGGGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGTCGAGG
TTATCTATCGCGCGTCACAGGGCGCATACGTCGGCGTGGTGACCGTTCATCCGAAGTCAGAGAAGTATGTCTTCATCCAC
GGCCCGGAAAATCCTGATGAAACATGGTATTACGACTTTCATCATCGGCGCGGAGTGATTGTTGAAAGCGGCAAGGTGAG
CAATCTCGATGCAATGGATATTACCGCGCCATATACGCCAGGAGCGCTACGTGGCGGCAGCCATGTACATGTCTTTAGCC
CGAACGGTGAAAGGGTGAGCTTTACCTACAACGACCATGTAATGCATGAACTCGATCCGGCGCTGGATTTGCGAAACGTC
GGTGTTGCTGCACCGTTTGGCCCGGTCAACGTACAAAAGCAGCATCCGCGTGAATACAGCGGTAGCCACTGGTGCGTGCT
GGTAAGTAAAACCACGCCCACGCCACAGCCTGGCAGTGATGAAATCAATCGTGCTTATGAAGAAGGATGGGTAGGAAATC
ACGCGCTGGCGTTTATTGGCGACACACTTTCGGCAAAGGGCGAGAAAGTGCCGGAGCTGTTTATTGTCGAGTTGCCGAAA
GATGAAGCTGGCTGGAAAGCGGCAGGTGATGTGCCGTTAAGTGGAACGGAAACAACCCTGCCTGCGCCACCGCGTGGTGT
CATGCAGCGACGTTTAACCTTTACGCACCATCGTATTTACCCGGGCCTGGTTAACATTCCGCGCCACTGGGTGCGTTGTA
ATCCTCAAGGAACACAAATTGCGTTTTTAATGCGCGATGATAACGGCATTGTGCAACTGTGGCTTATCTCGCCACAGGGC
GGTAAACCACACCAGTTAACCCATAATAAAACGGATATTCAGTCTGCATTTAACTGGCATCCATCAGGCGAATGGCTGGG
ATTTGTGCTGGATAATCGGATTGCTTGTGCCCATGCGCAAAGCGGCGAGGTTGAGTATTTAACCGAAAACCACGGCAATC
CACCTTCTGCGGACGCCGTGGTTTTCTCGCCGGATGGTCAATGGTTGGCGTGGATGGAGGACGGTCAGTTGTGGATCACC
GAAACTGACCGCTAG

Upstream 100 bases:

>100_bases
CTTTTCACTCACATTCATCACGATGGCAAAAGACTATTGTCTGAAAGTGAAGTCCTTGTGAAGTATGATGGCGGGAACCG
TTTTGTATCAGGACCGCGCC

Downstream 100 bases:

>100_bases
CTCTCAGTTTGCAGGCATTTTGGCGGGGGGAATGACGTTATTGGTTTCTTGCGCGTCGGCTTCGCTTTTTTCAACGCGCG
AGCGCACTGAGCTGTCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKQITFAPRNHLLTNTNTWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVIYRASQGAYVGVVTVHPKSEKYVFIH
GPENPDETWYYDFHHRRGVIVESGKVSNLDAMDITAPYTPGALRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNV
GVAAPFGPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSAKGEKVPELFIVELPK
DEAGWKAAGDVPLSGTETTLPAPPRGVMQRRLTFTHHRIYPGLVNIPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQG
GKPHQLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQSGEVEYLTENHGNPPSADAVVFSPDGQWLAWMEDGQLWIT
ETDR

Sequences:

>Translated_404_residues
MKQITFAPRNHLLTNTNTWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVIYRASQGAYVGVVTVHPKSEKYVFIH
GPENPDETWYYDFHHRRGVIVESGKVSNLDAMDITAPYTPGALRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNV
GVAAPFGPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSAKGEKVPELFIVELPK
DEAGWKAAGDVPLSGTETTLPAPPRGVMQRRLTFTHHRIYPGLVNIPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQG
GKPHQLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQSGEVEYLTENHGNPPSADAVVFSPDGQWLAWMEDGQLWIT
ETDR
>Mature_404_residues
MKQITFAPRNHLLTNTNTWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVIYRASQGAYVGVVTVHPKSEKYVFIH
GPENPDETWYYDFHHRRGVIVESGKVSNLDAMDITAPYTPGALRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNV
GVAAPFGPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSAKGEKVPELFIVELPK
DEAGWKAAGDVPLSGTETTLPAPPRGVMQRRLTFTHHRIYPGLVNIPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQG
GKPHQLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQSGEVEYLTENHGNPPSADAVVFSPDGQWLAWMEDGQLWIT
ETDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI308199520, Length=404, Percent_Identity=95.7920792079208, Blast_Score=806, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR022223 [H]

Pfam domain/function: PF12566 DUF3748 [H]

EC number: NA

Molecular weight: Translated: 45108; Mature: 45108

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQITFAPRNHLLTNTNTWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVIYRASQ
CCEEEECCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEECC
GAYVGVVTVHPKSEKYVFIHGPENPDETWYYDFHHRRGVIVESGKVSNLDAMDITAPYTP
CCEEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCEEEEECCCCCCCCEEEEECCCCC
GALRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNVGVAAPFGPVNVQKQHPREYS
CCCCCCCEEEEECCCCCEEEEEECCCCHHHCCCCCCHHHCCEECCCCCCCCCCCCCCCCC
GSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSAKGEKVPELFIVELPK
CCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCC
DEAGWKAAGDVPLSGTETTLPAPPRGVMQRRLTFTHHRIYPGLVNIPRHWVRCNPQGTQI
CCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHEEEEEEECCCCCCCCCEEEEECCCCCEE
AFLMRDDNGIVQLWLISPQGGKPHQLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQ
EEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCEEEEEECC
SGEVEYLTENHGNPPSADAVVFSPDGQWLAWMEDGQLWITETDR
CCCEEEEECCCCCCCCCCEEEECCCCCEEEEEECCEEEEEECCC
>Mature Secondary Structure
MKQITFAPRNHLLTNTNTWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVIYRASQ
CCEEEECCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEECC
GAYVGVVTVHPKSEKYVFIHGPENPDETWYYDFHHRRGVIVESGKVSNLDAMDITAPYTP
CCEEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCEEEEECCCCCCCCEEEEECCCCC
GALRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNVGVAAPFGPVNVQKQHPREYS
CCCCCCCEEEEECCCCCEEEEEECCCCHHHCCCCCCHHHCCEECCCCCCCCCCCCCCCCC
GSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSAKGEKVPELFIVELPK
CCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCC
DEAGWKAAGDVPLSGTETTLPAPPRGVMQRRLTFTHHRIYPGLVNIPRHWVRCNPQGTQI
CCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHEEEEEEECCCCCCCCCEEEEECCCCCEE
AFLMRDDNGIVQLWLISPQGGKPHQLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQ
EEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCEEEEEECC
SGEVEYLTENHGNPPSADAVVFSPDGQWLAWMEDGQLWITETDR
CCCEEEEECCCCCCCCCCEEEECCCCCEEEEEECCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]