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The map label for this gene is yiaB [H]

Identifier: 218691852

GI number: 218691852

Start: 4168630

End: 4168971

Strand: Reverse

Name: yiaB [H]

Synonym: ECED1_4248

Alternate gene names: 218691852

Gene position: 4168971-4168630 (Counterclockwise)

Preceding gene: 218691853

Following gene: 218691850

Centisome position: 80.03

GC content: 41.81

Gene sequence:

>342_bases
ATGAAAACCTCAAAGACTGTGGCAAAACTATTATTTGTTGTCGGGGCGCTGGTTTATCTGGTTGGGCTATGGATCTCATG
CCCATTGTTAAGTGGAAAAGGTTATTTTCTTGGCGTGTTAATGACGGCAACTTTTGGCAACTATGCATATCTTCGCGCAG
AAAAACTTGGGCAACTGGATGATTTTTTTATCCACGTCTGTCAGTTGGTAGCGTTAATCACTATCGGTCTCTTGTTTATC
GGTGTTTTAAACGCACCTATCAATGCTTATGAAATGGTGATCTATCCCATCGCCTTTTTTGTCTGCTTGTTTGGTCAAAT
GCGTTTGTTTCGCTCGGCATGA

Upstream 100 bases:

>100_bases
TAGTATGAATTTATTCTGAAAATCATTTGTTAATGGCATTTTTCAGTTTTGTCTTTCGTTGGTTACTCGTAATGTATCGC
TGGTAGATATGGAGATCGTT

Downstream 100 bases:

>100_bases
GCAACATAAAGTTCTTACACATTCAGGAATGAAAGGAATACTGTGATGGACAACAAAATATCAACCTATTCTCCGGCATT
TAGTATTGTTTCATGGGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLDDFFIHVCQLVALITIGLLFI
GVLNAPINAYEMVIYPIAFFVCLFGQMRLFRSA

Sequences:

>Translated_113_residues
MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLDDFFIHVCQLVALITIGLLFI
GVLNAPINAYEMVIYPIAFFVCLFGQMRLFRSA
>Mature_113_residues
MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLDDFFIHVCQLVALITIGLLFI
GVLNAPINAYEMVIYPIAFFVCLFGQMRLFRSA

Specific function: Unknown

COG id: COG4682

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082293, Length=113, Percent_Identity=97.3451327433628, Blast_Score=223, Evalue=2e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008024 [H]

Pfam domain/function: PF05360 YiaAB [H]

EC number: NA

Molecular weight: Translated: 12523; Mature: 12523

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLD
CCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCHH
DFFIHVCQLVALITIGLLFIGVLNAPINAYEMVIYPIAFFVCLFGQMRLFRSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLD
CCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCHH
DFFIHVCQLVALITIGLLFIGVLNAPINAYEMVIYPIAFFVCLFGQMRLFRSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]