| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is ygjJ [H]
Identifier: 218691383
GI number: 218691383
Start: 3676834
End: 3677904
Strand: Direct
Name: ygjJ [H]
Synonym: ECED1_3747
Alternate gene names: 218691383
Gene position: 3676834-3677904 (Clockwise)
Preceding gene: 218691382
Following gene: 218691384
Centisome position: 70.58
GC content: 51.63
Gene sequence:
>1071_bases ATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCCGCTGAAGAAGC ACGTCCGGCAGAACATGACGACTCAAAAACCCCCGCAATGACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAAT TAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGCACCTATATTGAAGGTGGCCTG GAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTACAGGCCGACCACGACGGTAATGCCTG GGTGCCTGACCATAGCTGGGGTGGCTTCGAAGGTGGGATTAACCGTTTCTATGGCGGTTATCGTACCAATGATGGCACCG AAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACGCCCGATCTAGGCTAC GTCATTCCCAATACCCGCGATATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAACGTTACCGC CACACCTGCCGGACATCATGACGAAAGCAAAGCCTGGCTACATTTTGGCAAGTACGATCGCTACGACGACAAATATACCT ATCCGGCAATGATGAACGGTTACATCCAGTATGACCTTACAGAAGGTATCACCTGGATGAATGGTCTGGAAATCACCGAC GGCACAGGCCAACTCTATCTCACGGGCCTGCTTACCCCTAACTTTGCCGCTCGCGCCTGGCACCATACCGGACGCGCCGA CGGGCTGGACGTACCGGGAAGTGAAAGCGGGATGATGGTGAGCGCCATGTATGAAGCGTTAAAGGGCGTTTATCTCTCCA CCGCTTACACCTACGCCAAACATCGCCCTGACCACGCTGACGATGAAACCACCTCTTTCATGCAGTTTGGTATCTGGTAC GAATACGGCGGCGGACGTTTCGCAACGGCTTTTGATAGCCGCTTCTACATGAAAAATGCCTCTCACGATCCCAGCGACCA ACTCTTCCTGATGCAATATTTTTACTGGTAA
Upstream 100 bases:
>100_bases TCTTCCTGGATGGGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCT TTAGCTCATGGATTAACACA
Downstream 100 bases:
>100_bases TAAGGACAGTAATCTCATGAAAATCAAAACCATTTTAACGCCAGTAGCCTGTGCTCTGCTGATGAGCTTTTCCGCCCATG CCGCTAACGCTGACAATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKLITAPCRALLALPFCYAFSAAAEEARPAEHDDSKTPAMTSTSSPSFRFYGELGVGGYMDLEGENKHKYSDGTYIEGGL EMKYGSWFGLIYGEGWTVQADHDGNAWVPDHSWGGFEGGINRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWGDFTPDLGY VIPNTRDIMTALKVQNLSGNFRYNVTATPAGHHDESKAWLHFGKYDRYDDKYTYPAMMNGYIQYDLTEGITWMNGLEITD GTGQLYLTGLLTPNFAARAWHHTGRADGLDVPGSESGMMVSAMYEALKGVYLSTAYTYAKHRPDHADDETTSFMQFGIWY EYGGGRFATAFDSRFYMKNASHDPSDQLFLMQYFYW
Sequences:
>Translated_356_residues MKLITAPCRALLALPFCYAFSAAAEEARPAEHDDSKTPAMTSTSSPSFRFYGELGVGGYMDLEGENKHKYSDGTYIEGGL EMKYGSWFGLIYGEGWTVQADHDGNAWVPDHSWGGFEGGINRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWGDFTPDLGY VIPNTRDIMTALKVQNLSGNFRYNVTATPAGHHDESKAWLHFGKYDRYDDKYTYPAMMNGYIQYDLTEGITWMNGLEITD GTGQLYLTGLLTPNFAARAWHHTGRADGLDVPGSESGMMVSAMYEALKGVYLSTAYTYAKHRPDHADDETTSFMQFGIWY EYGGGRFATAFDSRFYMKNASHDPSDQLFLMQYFYW >Mature_356_residues MKLITAPCRALLALPFCYAFSAAAEEARPAEHDDSKTPAMTSTSSPSFRFYGELGVGGYMDLEGENKHKYSDGTYIEGGL EMKYGSWFGLIYGEGWTVQADHDGNAWVPDHSWGGFEGGINRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWGDFTPDLGY VIPNTRDIMTALKVQNLSGNFRYNVTATPAGHHDESKAWLHFGKYDRYDDKYTYPAMMNGYIQYDLTEGITWMNGLEITD GTGQLYLTGLLTPNFAARAWHHTGRADGLDVPGSESGMMVSAMYEALKGVYLSTAYTYAKHRPDHADDETTSFMQFGIWY EYGGGRFATAFDSRFYMKNASHDPSDQLFLMQYFYW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789461, Length=356, Percent_Identity=98.314606741573, Blast_Score=730, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40175; Mature: 40175
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLITAPCRALLALPFCYAFSAAAEEARPAEHDDSKTPAMTSTSSPSFRFYGELGVGGYM CCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEEEECCCEEE DLEGENKHKYSDGTYIEGGLEMKYGSWFGLIYGEGWTVQADHDGNAWVPDHSWGGFEGGI ECCCCCCCCCCCCCEEECCEEEECCCEEEEEECCCEEEEECCCCCEECCCCCCCCCCCCH NRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWGDFTPDLGYVIPNTRDIMTALKVQNLSGN HHHCCCEECCCCCEEEEEECCCCCCCHHHHCCCCCCCCCEECCCHHHHHHHHHEECCCCC FRYNVTATPAGHHDESKAWLHFGKYDRYDDKYTYPAMMNGYIQYDLTEGITWMNGLEITD EEEEEEECCCCCCCCCCEEEEECCCCCCCCCEECHHHHCCEEEEEECCCCEECCCEEEEC GTGQLYLTGLLTPNFAARAWHHTGRADGLDVPGSESGMMVSAMYEALKGVYLSTAYTYAK CCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHCEEHHHHHHHHH HRPDHADDETTSFMQFGIWYEYGGGRFATAFDSRFYMKNASHDPSDQLFLMQYFYW CCCCCCCCHHHHHEEEEEEEEECCCEEEEEECCEEEECCCCCCCCCCEEEEEECCC >Mature Secondary Structure MKLITAPCRALLALPFCYAFSAAAEEARPAEHDDSKTPAMTSTSSPSFRFYGELGVGGYM CCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEEEECCCEEE DLEGENKHKYSDGTYIEGGLEMKYGSWFGLIYGEGWTVQADHDGNAWVPDHSWGGFEGGI ECCCCCCCCCCCCCEEECCEEEECCCEEEEEECCCEEEEECCCCCEECCCCCCCCCCCCH NRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWGDFTPDLGYVIPNTRDIMTALKVQNLSGN HHHCCCEECCCCCEEEEEECCCCCCCHHHHCCCCCCCCCEECCCHHHHHHHHHEECCCCC FRYNVTATPAGHHDESKAWLHFGKYDRYDDKYTYPAMMNGYIQYDLTEGITWMNGLEITD EEEEEEECCCCCCCCCCEEEEECCCCCCCCCEECHHHHCCEEEEEECCCCEECCCEEEEC GTGQLYLTGLLTPNFAARAWHHTGRADGLDVPGSESGMMVSAMYEALKGVYLSTAYTYAK CCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHCEEHHHHHHHHH HRPDHADDETTSFMQFGIWYEYGGGRFATAFDSRFYMKNASHDPSDQLFLMQYFYW CCCCCCCCHHHHHEEEEEEEEECCCEEEEEECCEEEECCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]