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The map label for this gene is ygjK [H]

Identifier: 218691384

GI number: 218691384

Start: 3677921

End: 3680272

Strand: Direct

Name: ygjK [H]

Synonym: ECED1_3748

Alternate gene names: 218691384

Gene position: 3677921-3680272 (Clockwise)

Preceding gene: 218691383

Following gene: 218691385

Centisome position: 70.6

GC content: 54.59

Gene sequence:

>2352_bases
ATGAAAATCAAAACCATTTTAACGCCAGTAGCCTGTGCTCTGCTGATGAGCTTTTCCGCCCATGCCGCTAACGCTGACAA
TTATAAAAACGTGATTAACCGTACTGGCGCGCCGCAGTACATGAAGGATTACGATTACGACGATCACCAGCGTTTTAATC
CGTTTTTCGATCTCGGAGCCTGGCATGGTCATCTGTTGCCAGACGGCCCTAACACCATGGGCGGTTTTCCAGGCGTTGCG
CTGCTGACGGAAGAATACATCAACTTTATGGCCAGCAATTTCGATCGCCTGACCGTCTGGCAAGACGGCAAGAAAGTCGA
TTTCACGCTGGAGGCATACAGTATACCCGGCGCGCTGGTGCAAAAGTTGATATCGAAAGATGTACAGGTCGAAATGATTC
TGCGCTTCGCCACGCCGCGCACATCACTACTGGAAACCAAAATCACCAGCGATAAACCGCTGGATCTGGTGTGGGATGGT
GAACTGCTGGAAAAACTGGAAGCGAAAGAAGGGAAACCGCTTTCCGATAAAACCATTGCTGGCGAGTACCCTGACTATCA
GCGCAAAATCAGCGCCACCCGTGATGGCCTGAAAGTCATCTTTGGCAAAGTGCGCGCCACCTGGGATCTGCTGACCTCCG
GTGAATCAGAATATCAGGTGCATAAATCCCTGCCAGTGCAGACTGAAATCAACGGCAATCGCTTTACCAGTAAGGCGCAT
ATCAACGGTTCGACGACGCTCTATACCACCTACTCCCATCTGCTGACCGCTCAGGAAGTTAGCAAAGAGCAAATGCAGAT
CCGCGATATTCTGGCGCGTCCGGCGTTTTATCTCACCGCCTCGCAGCAACGCTGGGAAGAGTATCTGAAGAAAGGGTTAA
CCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCCATCGAAACGCTCAACGGTAACTGGCGATCGCCG
GGCGGTGCGGTGAAATATAACACCGTCACGCCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGA
TACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGATATCGCCAAAGAGAATATCCGCGCGGTCTTCTCCTGGC
AGATCCAGCCAGGCGACAGCGTGCGTCCGCAGGATGTGGGCTTTGTCCCCGACCTGATAGCGTGGAACCTTAGCCCGGAG
CGTGGCGGCGATGGCGGCAACTGGAACGAACGTAACACCAAACCCAGCCTTGCCGCCTGGTCGGTGATGGAAGTGTACAA
CGTCACCCAGGATAAAAACTGGCTGGCAGAGATGTACCCGAAACTGGTGGCCTATCACGACTGGTGGCTACGTAACCGCG
ATCACAACGGCAACGGCGTACCGGAATATGGCGCAACCCGCGATAAAGCCCACAATACTGAGAATGGCGAGATGCTGTTT
ACAGTGAAAAAAGGCGCCAAAGAAGAGACGCAGTCTGGGCTGAACAACTACGCCCGTGTGGTGGAGAAAGGCCAGTACGA
CAGTCTGGAAATTCCGGCACAGGTTGCGGCGTCGTGGGAATCGGGGCGTGATGATGCCGCCGTCTTTGGGTTTATCGACA
AGGAACAGTTGGATAAATATGTCGCTAACGGCGGCAAACGTAGCGACTGGACGGTGAAATTCGCCGAGAACCGCAGTCAG
GACGGAACGTTGCTGGGCTACTCGCTATTGCAGGAGTCGGTGGATCAGGCCAGCTATATGTACAGCGATAACCATTATCT
GGCGGAGATGGCGACGATTCTCAGTAAGCCGGAAGAGGCCAAACGCTATCGTCAGTTAGCACAACAGCTCGCGGACTACA
TCAACACTTGTATGTTCGACCCGACTACACAGTTCTACTATGACGTGCGTATTGAAGATAAACCGCTGGCGAACGGCTGC
GCGGGCAAACCGATTGTCGAGCGCGGTAAAGGGCCGGAAGGCTGGTCACCGCTGTTTAACGGTGCGGCAACGCAGGCCAA
CGCCGACGCGGTGGTGAAGGTGATGCTGGATCCGAAAGAATTCAACACCTTTGTCCCGCTGGGGACGGCAGCGTTAACCA
ACCCAGCCTTTGGCGCAGATATCTACTGGCGCGGGCGCGTATGGGTGGATCAGTTCTGGTTTGGTCTGAAAGGGATGGAG
CGTTACGGTTATCGCGATGACGCCCTGAAACTGGCTGATACGTTCTTCCGGCACGCCAAAGGGTTAACCGCCGATGGCCC
GATTCAGGAGAATTACAACCCGCTCACTGGCGCGCAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATA
TGTTGTATAACGATTTTTTCCGTAAGCAGTAA

Upstream 100 bases:

>100_bases
GCTTTTGATAGCCGCTTCTACATGAAAAATGCCTCTCACGATCCCAGCGACCAACTCTTCCTGATGCAATATTTTTACTG
GTAATAAGGACAGTAATCTC

Downstream 100 bases:

>100_bases
TTTGCAACGGCTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGCAATCCCCCAGGCCGGATAAGACGCGTCA
AGCGTCGCATCCGGCGTTAC

Product: putative glycosyl hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 783; Mature: 783

Protein sequence:

>783_residues
MKIKTILTPVACALLMSFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVA
LLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALVQKLISKDVQVEMILRFATPRTSLLETKITSDKPLDLVWDG
ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVIFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSP
GGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPE
RGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKNWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTENGEMLF
TVKKGAKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQ
DGTLLGYSLLQESVDQASYMYSDNHYLAEMATILSKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGC
AGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRKQ

Sequences:

>Translated_783_residues
MKIKTILTPVACALLMSFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVA
LLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALVQKLISKDVQVEMILRFATPRTSLLETKITSDKPLDLVWDG
ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVIFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSP
GGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPE
RGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKNWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTENGEMLF
TVKKGAKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQ
DGTLLGYSLLQESVDQASYMYSDNHYLAEMATILSKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGC
AGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRKQ
>Mature_783_residues
MKIKTILTPVACALLMSFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVA
LLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALVQKLISKDVQVEMILRFATPRTSLLETKITSDKPLDLVWDG
ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVIFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSP
GGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPE
RGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKNWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTENGEMLF
TVKKGAKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQ
DGTLLGYSLLQESVDQASYMYSDNHYLAEMATILSKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGC
AGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789462, Length=783, Percent_Identity=98.3397190293742, Blast_Score=1607, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR001661 [H]

Pfam domain/function: PF01204 Trehalase [H]

EC number: NA

Molecular weight: Translated: 88419; Mature: 88419

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKTILTPVACALLMSFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGA
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHCCCC
WHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCCHHHH
QKLISKDVQVEMILRFATPRTSLLETKITSDKPLDLVWDGELLEKLEAKEGKPLSDKTIA
HHHHCCCCEEEEEEEECCCCHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCC
GEYPDYQRKISATRDGLKVIFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCEEEECCCCEEEEEEE
INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATP
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCH
EQTRVAVKAIETLNGNWRSPGGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNP
HHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHCCH
DIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAW
HHHHHCCEEEEEEEECCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHH
SVMEVYNVTQDKNWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTENGEMLF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
TVKKGAKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKY
EECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHH
VANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILSKPEEA
HHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCHHH
KRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFN
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCHHHC
GAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
CCCCCCCCCEEEEEEECHHHCCCCCCCCHHHHCCCCCCCCEEECCEEEHHHHHHHHHHHH
RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFF
HCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RKQ
HCC
>Mature Secondary Structure
MKIKTILTPVACALLMSFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGA
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHCCCC
WHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCCHHHH
QKLISKDVQVEMILRFATPRTSLLETKITSDKPLDLVWDGELLEKLEAKEGKPLSDKTIA
HHHHCCCCEEEEEEEECCCCHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCC
GEYPDYQRKISATRDGLKVIFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCEEEECCCCEEEEEEE
INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATP
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCH
EQTRVAVKAIETLNGNWRSPGGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNP
HHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHCCH
DIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAW
HHHHHCCEEEEEEEECCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHH
SVMEVYNVTQDKNWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTENGEMLF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
TVKKGAKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKY
EECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHH
VANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILSKPEEA
HHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCHHH
KRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFN
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCHHHC
GAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
CCCCCCCCCEEEEEEECHHHCCCCCCCCHHHHCCCCCCCCEEECCEEEHHHHHHHHHHHH
RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFF
HCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RKQ
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]