Click here to switch to the map view.

The map label for this gene is yqiG [H]

Identifier: 218691348

GI number: 218691348

Start: 3635454

End: 3637976

Strand: Direct

Name: yqiG [H]

Synonym: ECED1_3711

Alternate gene names: 218691348

Gene position: 3635454-3637976 (Clockwise)

Preceding gene: 218691347

Following gene: 218691349

Centisome position: 69.78

GC content: 46.89

Gene sequence:

>2523_bases
ATGAACAATAAAAACACGTTTTCCCGGGATAAGTTATCCCATGCAATTAAAAATGCCCTGTCTGGCGTTGTGTGTTCCCT
ACTCTTCGTTTTGCCAGTCCACGCCGTAGAATTCAACGTCGATATGATTGACGCAGAAGACCGTGAGAATATCGACATCT
CTCGTTTTGAGAAAAAAGGCTATATCCTCCCTGGTAGATACCTCGTTCGTGTGCAAATAAATAAAAATATGTTGCCACAA
ACGTTAATACTGGAATGGGTAAAAGCCGATAATGAAAGTGGTTCGTTACTCTGCTTAACCAAAGAAAATTTGACTAATTT
CGGTCTTAATACGGAATTTATTGAATCATTGCAAAACATAGCTGGCAGCGAATGTCTCGATTTAAGCCAACGTCAGGAGT
TAACGACACGACTTGATAAAGCTACGATGATATTATCGCTAAGTGTTCCCCAGGCATGGTTAAAATACCAGGCAACAAAC
TGGACGCCACCAGAGTTTTGGGATACCGGTATCGCCGGGTTTATCCTTGATTACAACGTGTACGCCAGCCAGTATGCCCC
ACATCACGGAGACAGCACCCAAAACGTCAGCTCCTATGGTACGTTAGGCTTTAACCTCGGCGCATGGCGCTTACGTAGCG
ATTACCAATATAATCAGAATTTTGCTGATGGACGCTCGGTAAACCGCGACAGCGAATTTGCACGAACTTATCTGTTTCGC
CCTATCCCCTCCTGGTCGTCAAAATTCACTATGGGCCAGTACGACCTGAGCTCCAATCTTTACGATACCTTCCACTTTAC
TGGCGCATCGCTGGAAAGTGATGAAAGCATGCTGCCGCCAGATTTACAGGGTTATGCGCCACAAATTACCGGCATCGCGC
AGACCAACGCGAAAGTAACTGTGGCACAAAATGGTCGTGTACTTTATCAAACCACTGTCGCGCCAGGCCCTTTTACTATT
TCTGATTTGGGGCAATCGTTTCAGGGGCAGCTGGATGTCACAGTGGAAGAAGAAGATGGCCGCACCAGCACCTTCCAGGT
TGGCTCCGCATCCATTCCCTATTTAACCCGTAAAGGGCAAGTGCGCTATAAAACGTCACTGGGAAAACCGACATCCGTCG
GGCATAACGATATCAATAATCCCTTTTTCTGGACGGCGGAAGCCTCCTGGGGCTGGCTGAACAATGTGTCGTTGTATGGT
GGTGGCATGTTCACCGCTGATGATTATCAGGCTATCACTACCGGTATTGGCTTTAACCTTAACCAATTCGGTTCGCTTTC
TTTTGATGTCACCGGAGCAGACGCGTCTTTACAGCAACAAAATAGCGGCAATCTGCGTGGTTACAGCTATCGCTTCAACT
ATGCAAAGCATTTCGAATCGACAGGCAGTCAGATTACCTTCGCGGGTTATCGCTTCTCAGATAAAGATTACGTGTCGATG
AGTGAGTACCTCAGCTCGCGTAATGGCGATGAGTCAATCGATAATGAAAAAGAGAGTTATGTCATTTCCTTGAACCAGTA
CTTTGAAACGCTGGAATTAAACTCTTATCTCAACGTTACACGCAATACTTATTGGGACAGCGCCAGCAATACCAACTACT
CCGTATCTGTAAGCAAAAACTTTGATATTGGCGATTTCAAAGGTATATCTGCATCGCTGGCAGTAAGTCGAATCCGCTGG
GATGACGACGAAGAGAATCAATATTACTTCTCTTTCTCTCTACCTTTACAACAAAACCGCAACATCTCCTACAGTATGCA
GCGAACGGGAAGCAGTAATACTTCGCAGATGATTTCCTGGTACGATTCATCAGATCGCAACAATATCTGGAATATTTCAG
CGTCGGCAACGGACGACAATATACGTGATGGCGAACCAACACTGCGCGGCAGCTACCAGCACTATTCGCCGTGGGGACGT
CTGAACATTAATGGCAGTGTACAGCCGAATCAGTACAATTCTGTTACCGCAGGCTGGTACGGTTCACTTACCGCTACACG
TCATGGTGTCGCCCTTCACGATTATAGCTATGGCGATAACGCCCGCATGATGGTCGATACCGATGGCATCTCCGGCATTG
AAATCAACTCTAACCGTACCGTTACCAACGGGCTGGGCATCGCCGTGATACCTTCGTTATCGAACTACACCACCTCCATG
TTGCGGGTGAACAATAACGATCTGCCAGAAGGTGTCGATGTCGAAAACTCGGTTATTCGCACCACGCTCACCCAGGGTGC
CATCGGCTACGCAAAACTGAATGCCACCACCGGTTACCAAATCGTCGGCGTTATTCGTCAGGAAAATGGGCGCTTCCCTC
CACTAGGTGTGAATGTCACGGATAAAGCGACAGGTAAAGATGTGGGCCTGGTCGCGGAAGACGGCTTCGTTTATCTCAGC
GGTATTCAGGAAAATAGTACTCTGCATTTAACCTGGGGTGATAATACCTGTGAAGTCACGCCGCCAAACCAAAGTAACAT
TAGCGAAAGCGCAATAATTTTACCTTGTAAAACAGTCAAATAA

Upstream 100 bases:

>100_bases
TCGACTACAAGTAATCGGTAGTCAATACCTACACAACGCCAGGCGGTAAAGCCGATGAAATTTCATCGGCAACTTTGGGC
CTTTTTAGAAATGGATTTTT

Downstream 100 bases:

>100_bases
TTCAGGATGAATATAATGAAATCACCATTAATCACAACAGGAATGATTTGTTTACTGGGGATCTGCAACTTTGCCCAGGC
GACTGTCTCCCCCGACAGAA

Product: putative outer membrane usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 840; Mature: 840

Protein sequence:

>840_residues
MNNKNTFSRDKLSHAIKNALSGVVCSLLFVLPVHAVEFNVDMIDAEDRENIDISRFEKKGYILPGRYLVRVQINKNMLPQ
TLILEWVKADNESGSLLCLTKENLTNFGLNTEFIESLQNIAGSECLDLSQRQELTTRLDKATMILSLSVPQAWLKYQATN
WTPPEFWDTGIAGFILDYNVYASQYAPHHGDSTQNVSSYGTLGFNLGAWRLRSDYQYNQNFADGRSVNRDSEFARTYLFR
PIPSWSSKFTMGQYDLSSNLYDTFHFTGASLESDESMLPPDLQGYAPQITGIAQTNAKVTVAQNGRVLYQTTVAPGPFTI
SDLGQSFQGQLDVTVEEEDGRTSTFQVGSASIPYLTRKGQVRYKTSLGKPTSVGHNDINNPFFWTAEASWGWLNNVSLYG
GGMFTADDYQAITTGIGFNLNQFGSLSFDVTGADASLQQQNSGNLRGYSYRFNYAKHFESTGSQITFAGYRFSDKDYVSM
SEYLSSRNGDESIDNEKESYVISLNQYFETLELNSYLNVTRNTYWDSASNTNYSVSVSKNFDIGDFKGISASLAVSRIRW
DDDEENQYYFSFSLPLQQNRNISYSMQRTGSSNTSQMISWYDSSDRNNIWNISASATDDNIRDGEPTLRGSYQHYSPWGR
LNINGSVQPNQYNSVTAGWYGSLTATRHGVALHDYSYGDNARMMVDTDGISGIEINSNRTVTNGLGIAVIPSLSNYTTSM
LRVNNNDLPEGVDVENSVIRTTLTQGAIGYAKLNATTGYQIVGVIRQENGRFPPLGVNVTDKATGKDVGLVAEDGFVYLS
GIQENSTLHLTWGDNTCEVTPPNQSNISESAIILPCKTVK

Sequences:

>Translated_840_residues
MNNKNTFSRDKLSHAIKNALSGVVCSLLFVLPVHAVEFNVDMIDAEDRENIDISRFEKKGYILPGRYLVRVQINKNMLPQ
TLILEWVKADNESGSLLCLTKENLTNFGLNTEFIESLQNIAGSECLDLSQRQELTTRLDKATMILSLSVPQAWLKYQATN
WTPPEFWDTGIAGFILDYNVYASQYAPHHGDSTQNVSSYGTLGFNLGAWRLRSDYQYNQNFADGRSVNRDSEFARTYLFR
PIPSWSSKFTMGQYDLSSNLYDTFHFTGASLESDESMLPPDLQGYAPQITGIAQTNAKVTVAQNGRVLYQTTVAPGPFTI
SDLGQSFQGQLDVTVEEEDGRTSTFQVGSASIPYLTRKGQVRYKTSLGKPTSVGHNDINNPFFWTAEASWGWLNNVSLYG
GGMFTADDYQAITTGIGFNLNQFGSLSFDVTGADASLQQQNSGNLRGYSYRFNYAKHFESTGSQITFAGYRFSDKDYVSM
SEYLSSRNGDESIDNEKESYVISLNQYFETLELNSYLNVTRNTYWDSASNTNYSVSVSKNFDIGDFKGISASLAVSRIRW
DDDEENQYYFSFSLPLQQNRNISYSMQRTGSSNTSQMISWYDSSDRNNIWNISASATDDNIRDGEPTLRGSYQHYSPWGR
LNINGSVQPNQYNSVTAGWYGSLTATRHGVALHDYSYGDNARMMVDTDGISGIEINSNRTVTNGLGIAVIPSLSNYTTSM
LRVNNNDLPEGVDVENSVIRTTLTQGAIGYAKLNATTGYQIVGVIRQENGRFPPLGVNVTDKATGKDVGLVAEDGFVYLS
GIQENSTLHLTWGDNTCEVTPPNQSNISESAIILPCKTVK
>Mature_840_residues
MNNKNTFSRDKLSHAIKNALSGVVCSLLFVLPVHAVEFNVDMIDAEDRENIDISRFEKKGYILPGRYLVRVQINKNMLPQ
TLILEWVKADNESGSLLCLTKENLTNFGLNTEFIESLQNIAGSECLDLSQRQELTTRLDKATMILSLSVPQAWLKYQATN
WTPPEFWDTGIAGFILDYNVYASQYAPHHGDSTQNVSSYGTLGFNLGAWRLRSDYQYNQNFADGRSVNRDSEFARTYLFR
PIPSWSSKFTMGQYDLSSNLYDTFHFTGASLESDESMLPPDLQGYAPQITGIAQTNAKVTVAQNGRVLYQTTVAPGPFTI
SDLGQSFQGQLDVTVEEEDGRTSTFQVGSASIPYLTRKGQVRYKTSLGKPTSVGHNDINNPFFWTAEASWGWLNNVSLYG
GGMFTADDYQAITTGIGFNLNQFGSLSFDVTGADASLQQQNSGNLRGYSYRFNYAKHFESTGSQITFAGYRFSDKDYVSM
SEYLSSRNGDESIDNEKESYVISLNQYFETLELNSYLNVTRNTYWDSASNTNYSVSVSKNFDIGDFKGISASLAVSRIRW
DDDEENQYYFSFSLPLQQNRNISYSMQRTGSSNTSQMISWYDSSDRNNIWNISASATDDNIRDGEPTLRGSYQHYSPWGR
LNINGSVQPNQYNSVTAGWYGSLTATRHGVALHDYSYGDNARMMVDTDGISGIEINSNRTVTNGLGIAVIPSLSNYTTSM
LRVNNNDLPEGVDVENSVIRTTLTQGAIGYAKLNATTGYQIVGVIRQENGRFPPLGVNVTDKATGKDVGLVAEDGFVYLS
GIQENSTLHLTWGDNTCEVTPPNQSNISESAIILPCKTVK

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI87081778, Length=818, Percent_Identity=42.6650366748166, Blast_Score=654, Evalue=0.0,
Organism=Escherichia coli, GI1790772, Length=860, Percent_Identity=28.6046511627907, Blast_Score=292, Evalue=6e-80,
Organism=Escherichia coli, GI1786332, Length=876, Percent_Identity=28.6529680365297, Blast_Score=280, Evalue=3e-76,
Organism=Escherichia coli, GI1787172, Length=816, Percent_Identity=28.7990196078431, Blast_Score=280, Evalue=4e-76,
Organism=Escherichia coli, GI1789533, Length=832, Percent_Identity=30.0480769230769, Blast_Score=278, Evalue=1e-75,
Organism=Escherichia coli, GI1786744, Length=846, Percent_Identity=27.1867612293144, Blast_Score=246, Evalue=5e-66,
Organism=Escherichia coli, GI1788427, Length=605, Percent_Identity=29.2561983471074, Blast_Score=209, Evalue=8e-55,
Organism=Escherichia coli, GI1789610, Length=845, Percent_Identity=24.1420118343195, Blast_Score=109, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 93514; Mature: 93514

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKNTFSRDKLSHAIKNALSGVVCSLLFVLPVHAVEFNVDMIDAEDRENIDISRFEKKG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCEECCCCC
YILPGRYLVRVQINKNMLPQTLILEWVKADNESGSLLCLTKENLTNFGLNTEFIESLQNI
CCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHH
AGSECLDLSQRQELTTRLDKATMILSLSVPQAWLKYQATNWTPPEFWDTGIAGFILDYNV
CCCHHHCHHHHHHHHHHHCCEEEEEEECCCHHHHEEECCCCCCCHHHCCCCEEEEEEEEE
YASQYAPHHGDSTQNVSSYGTLGFNLGAWRLRSDYQYNQNFADGRSVNRDSEFARTYLFR
HHHHCCCCCCCCCCCCHHCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHEEE
PIPSWSSKFTMGQYDLSSNLYDTFHFTGASLESDESMLPPDLQGYAPQITGIAQTNAKVT
CCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEE
VAQNGRVLYQTTVAPGPFTISDLGQSFQGQLDVTVEEEDGRTSTFQVGSASIPYLTRKGQ
EEECCEEEEEEECCCCCEEHHHHCCCCCCEEEEEEECCCCCEEEEEECCCCCCEEECCCC
VRYKTSLGKPTSVGHNDINNPFFWTAEASWGWLNNVSLYGGGMFTADDYQAITTGIGFNL
EEEEECCCCCCCCCCCCCCCCEEEEEECCCCEECCEEEECCEEEECCCCEEEEECCCCCC
NQFGSLSFDVTGADASLQQQNSGNLRGYSYRFNYAKHFESTGSQITFAGYRFSDKDYVSM
CCCCCEEEEEECCCCCHHHCCCCCCEEEEEEECHHHHHHCCCCEEEEEEEEECCCCHHHH
SEYLSSRNGDESIDNEKESYVISLNQYFETLELNSYLNVTRNTYWDSASNTNYSVSVSKN
HHHHHCCCCCCCCCCCCCEEEEEHHHHHHHEECCCEEEEECCEEECCCCCCCEEEEEECC
FDIGDFKGISASLAVSRIRWDDDEENQYYFSFSLPLQQNRNISYSMQRTGSSNTSQMISW
CCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEE
YDSSDRNNIWNISASATDDNIRDGEPTLRGSYQHYSPWGRLNINGSVQPNQYNSVTAGWY
ECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCC
GSLTATRHGVALHDYSYGDNARMMVDTDGISGIEINSNRTVTNGLGIAVIPSLSNYTTSM
CCEEECCCCEEEEECCCCCCCEEEEECCCCCEEEECCCCEEECCCCEEEECCCCCCEEEE
LRVNNNDLPEGVDVENSVIRTTLTQGAIGYAKLNATTGYQIVGVIRQENGRFPPLGVNVT
EEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCCC
DKATGKDVGLVAEDGFVYLSGIQENSTLHLTWGDNTCEVTPPNQSNISESAIILPCKTVK
CCCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCEEEECCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MNNKNTFSRDKLSHAIKNALSGVVCSLLFVLPVHAVEFNVDMIDAEDRENIDISRFEKKG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCEECCCCC
YILPGRYLVRVQINKNMLPQTLILEWVKADNESGSLLCLTKENLTNFGLNTEFIESLQNI
CCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHH
AGSECLDLSQRQELTTRLDKATMILSLSVPQAWLKYQATNWTPPEFWDTGIAGFILDYNV
CCCHHHCHHHHHHHHHHHCCEEEEEEECCCHHHHEEECCCCCCCHHHCCCCEEEEEEEEE
YASQYAPHHGDSTQNVSSYGTLGFNLGAWRLRSDYQYNQNFADGRSVNRDSEFARTYLFR
HHHHCCCCCCCCCCCCHHCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHEEE
PIPSWSSKFTMGQYDLSSNLYDTFHFTGASLESDESMLPPDLQGYAPQITGIAQTNAKVT
CCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEE
VAQNGRVLYQTTVAPGPFTISDLGQSFQGQLDVTVEEEDGRTSTFQVGSASIPYLTRKGQ
EEECCEEEEEEECCCCCEEHHHHCCCCCCEEEEEEECCCCCEEEEEECCCCCCEEECCCC
VRYKTSLGKPTSVGHNDINNPFFWTAEASWGWLNNVSLYGGGMFTADDYQAITTGIGFNL
EEEEECCCCCCCCCCCCCCCCEEEEEECCCCEECCEEEECCEEEECCCCEEEEECCCCCC
NQFGSLSFDVTGADASLQQQNSGNLRGYSYRFNYAKHFESTGSQITFAGYRFSDKDYVSM
CCCCCEEEEEECCCCCHHHCCCCCCEEEEEEECHHHHHHCCCCEEEEEEEEECCCCHHHH
SEYLSSRNGDESIDNEKESYVISLNQYFETLELNSYLNVTRNTYWDSASNTNYSVSVSKN
HHHHHCCCCCCCCCCCCCEEEEEHHHHHHHEECCCEEEEECCEEECCCCCCCEEEEEECC
FDIGDFKGISASLAVSRIRWDDDEENQYYFSFSLPLQQNRNISYSMQRTGSSNTSQMISW
CCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEE
YDSSDRNNIWNISASATDDNIRDGEPTLRGSYQHYSPWGRLNINGSVQPNQYNSVTAGWY
ECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCC
GSLTATRHGVALHDYSYGDNARMMVDTDGISGIEINSNRTVTNGLGIAVIPSLSNYTTSM
CCEEECCCCEEEEECCCCCCCEEEEECCCCCEEEECCCCEEECCCCEEEECCCCCCEEEE
LRVNNNDLPEGVDVENSVIRTTLTQGAIGYAKLNATTGYQIVGVIRQENGRFPPLGVNVT
EEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCCC
DKATGKDVGLVAEDGFVYLSGIQENSTLHLTWGDNTCEVTPPNQSNISESAIILPCKTVK
CCCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCEEEECCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]