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The map label for this gene is yqiH [H]

Identifier: 218691349

GI number: 218691349

Start: 3637983

End: 3638732

Strand: Direct

Name: yqiH [H]

Synonym: ECED1_3713

Alternate gene names: 218691349

Gene position: 3637983-3638732 (Clockwise)

Preceding gene: 218691348

Following gene: 218691350

Centisome position: 69.83

GC content: 48.27

Gene sequence:

>750_bases
ATGAATATAATGAAATCACCATTAATCACAACAGGAATGATTTGTTTACTGGGGATCTGCAACTTTGCCCAGGCGACTGT
CTCCCCCGACAGAACACGCATCATTTTTAATGCTTCGAATAAAAGCGCAACGGTTCGCCTGACCAACCAAAGTAAAATCG
ATCCCTATCTGGCTCAGTCGTGGATTGAAGATGCCAGCGGTAAAAAAACGCGTGATTACATCTCGACATTGCCGCCGATG
GAACGTATTGAGCCTGATGAACAGATACAAATTCGCCTGATGGCACTGGCCTCGTTAAACGACTTACCACAGGACCGAGA
AACGTTGTTCTACTATAACGTGCGAGAAATTCCGCCGCGCGCCAAAGAACAGAATGTAATGCAAATCGCCATGCAAAGCC
GCCTGAAGCTATTCTGGCGGCCAAAAGCGATTGAGTTAAAAGAGGGGGAGATGATTCCTCTGCAAAAAGTAACGATTACC
CGCACCGCCGCCGGTCTGACCCTGAATAACCCGACGCCTTATCATATTACCGTCGGTTATATCGGCACTAATGGCAAGAC
ACTGATGCCCGGTGCGGACAGTATTATGGTGGCACCATTTACTTCTGCAACTCAACACCTAAGCAGCCTGCCCTCTACCT
TCCAGTTAGGCTTTGTGGCGGACTACGGCGGGCTGGAGATGTTTAAAGTCGAATGTAGTTCCATCCAATCCCTCTGCCAA
AGCTCTCCTGCTAAGAAGGGGAAAATATGA

Upstream 100 bases:

>100_bases
AACCTGGGGTGATAATACCTGTGAAGTCACGCCGCCAAACCAAAGTAACATTAGCGAAAGCGCAATAATTTTACCTTGTA
AAACAGTCAAATAATTCAGG

Downstream 100 bases:

>100_bases
TTACGCTTTTTCGTTTACTGGCGATTCTTTGCCTGTTTTTTAATGTTTCAGCTTTTGCTGTTGATTGCTATCAGGATGGG
TACAGAGGAACAACCCTCAT

Product: putative periplasmic pilin chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MNIMKSPLITTGMICLLGICNFAQATVSPDRTRIIFNASNKSATVRLTNQSKIDPYLAQSWIEDASGKKTRDYISTLPPM
ERIEPDEQIQIRLMALASLNDLPQDRETLFYYNVREIPPRAKEQNVMQIAMQSRLKLFWRPKAIELKEGEMIPLQKVTIT
RTAAGLTLNNPTPYHITVGYIGTNGKTLMPGADSIMVAPFTSATQHLSSLPSTFQLGFVADYGGLEMFKVECSSIQSLCQ
SSPAKKGKI

Sequences:

>Translated_249_residues
MNIMKSPLITTGMICLLGICNFAQATVSPDRTRIIFNASNKSATVRLTNQSKIDPYLAQSWIEDASGKKTRDYISTLPPM
ERIEPDEQIQIRLMALASLNDLPQDRETLFYYNVREIPPRAKEQNVMQIAMQSRLKLFWRPKAIELKEGEMIPLQKVTIT
RTAAGLTLNNPTPYHITVGYIGTNGKTLMPGADSIMVAPFTSATQHLSSLPSTFQLGFVADYGGLEMFKVECSSIQSLCQ
SSPAKKGKI
>Mature_249_residues
MNIMKSPLITTGMICLLGICNFAQATVSPDRTRIIFNASNKSATVRLTNQSKIDPYLAQSWIEDASGKKTRDYISTLPPM
ERIEPDEQIQIRLMALASLNDLPQDRETLFYYNVREIPPRAKEQNVMQIAMQSRLKLFWRPKAIELKEGEMIPLQKVTIT
RTAAGLTLNNPTPYHITVGYIGTNGKTLMPGADSIMVAPFTSATQHLSSLPSTFQLGFVADYGGLEMFKVECSSIQSLCQ
SSPAKKGKI

Specific function: Could be required for the biogenesis of a putative fimbria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI87082203, Length=249, Percent_Identity=48.1927710843374, Blast_Score=265, Evalue=2e-72,
Organism=Escherichia coli, GI1786936, Length=236, Percent_Identity=44.9152542372881, Blast_Score=213, Evalue=9e-57,
Organism=Escherichia coli, GI1788677, Length=224, Percent_Identity=40.625, Blast_Score=171, Evalue=4e-44,
Organism=Escherichia coli, GI1790771, Length=238, Percent_Identity=35.2941176470588, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1787171, Length=238, Percent_Identity=32.3529411764706, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1786333, Length=237, Percent_Identity=30.8016877637131, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1789532, Length=217, Percent_Identity=28.110599078341, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1788428, Length=211, Percent_Identity=30.8056872037915, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1786743, Length=208, Percent_Identity=30.7692307692308, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI87081806, Length=217, Percent_Identity=32.7188940092166, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 27692; Mature: 27692

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIMKSPLITTGMICLLGICNFAQATVSPDRTRIIFNASNKSATVRLTNQSKIDPYLAQS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHH
WIEDASGKKTRDYISTLPPMERIEPDEQIQIRLMALASLNDLPQDRETLFYYNVREIPPR
HHHHCCCCHHHHHHHHCCCHHHCCCCCHHEEEEEEEHHHCCCCCCCCEEEEEEHCCCCCC
AKEQNVMQIAMQSRLKLFWRPKAIELKEGEMIPLQKVTITRTAAGLTLNNPTPYHITVGY
CHHHHHHHHHHHHHHHEEECCCEEEECCCCCCCEEEEEEEEEECCEEECCCCCEEEEEEE
IGTNGKTLMPGADSIMVAPFTSATQHLSSLPSTFQLGFVADYGGLEMFKVECSSIQSLCQ
EECCCCEECCCCCCEEEECCCHHHHHHHHCCCCEEEEEEECCCCEEEEEEEHHHHHHHHH
SSPAKKGKI
CCCCCCCCC
>Mature Secondary Structure
MNIMKSPLITTGMICLLGICNFAQATVSPDRTRIIFNASNKSATVRLTNQSKIDPYLAQS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHH
WIEDASGKKTRDYISTLPPMERIEPDEQIQIRLMALASLNDLPQDRETLFYYNVREIPPR
HHHHCCCCHHHHHHHHCCCHHHCCCCCHHEEEEEEEHHHCCCCCCCCEEEEEEHCCCCCC
AKEQNVMQIAMQSRLKLFWRPKAIELKEGEMIPLQKVTITRTAAGLTLNNPTPYHITVGY
CHHHHHHHHHHHHHHHEEECCCEEEECCCCCCCEEEEEEEEEECCEEECCCCCEEEEEEE
IGTNGKTLMPGADSIMVAPFTSATQHLSSLPSTFQLGFVADYGGLEMFKVECSSIQSLCQ
EECCCCEECCCCCCEEEECCCHHHHHHHHCCCCEEEEEEECCCCEEEEEEEHHHHHHHHH
SSPAKKGKI
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]