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The map label for this gene is yafZ [H]

Identifier: 218691140

GI number: 218691140

Start: 3422272

End: 3423090

Strand: Direct

Name: yafZ [H]

Synonym: ECED1_3487

Alternate gene names: 218691140

Gene position: 3422272-3423090 (Clockwise)

Preceding gene: 218691139

Following gene: 218691141

Centisome position: 65.69

GC content: 55.92

Gene sequence:

>819_bases
ATGCGATTAGCCAGTCGTTTTGGTCATGTAAACCAGATACGCCGTGACCGTCCGCTGACACATGAAGAACTGATGCACTA
TGTACCCAGTATTTTTGGGGAAGATCGGCATACCTCCCGCAGTGAACGCTATGCGTACATTCCCACCATCACCGTACTGG
AAAGCCTGCAGCGGGAAGGTTTTCAGCCATTCTTCGCCTGCCAGACCCGCGTGCGCGACCCGGGCCGCCGGGGATACACC
AAACACATGCTGCGTCTGCGCCGTGACGGGGAGATAAACGGACAACATGTCCCTGAAATTATTCTGCTCAACTCTCATGA
CGGTACCTCCAGCTACCAGATGTTACCCGGATATTTTCGTGCCATCTGCACCAATGGCCTGGTCTGCGGTCAGTCGCTGG
GAGAAGTGCGTGTTCCGCACCGGGGAAATGTGGTGGACAGAGTCATTGAAGGGGCTTACGAGGTGGTGGGGGTTTTTGAC
CGGATTGAGGAAAAGCGTGATGCCATGCAGTCGCTGATTCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCGGCGCT
GACTTACCGTTATGGTGACGAACATCAGCCCGTCACCACCGCCGACATTCTGACACCACGACGCCGGGAGGATTACGGTA
AGGACCTGTGGAGTGCTTATCAGACCATTCAGGAGAATATGCTGAAAGGCGGAATTTCCGGTCGCAGTGCCAGAGGGAAA
CGTATCCATACCCGTGCCATTCACAGCATCGACACCGACATTAAGCTCAATCGCGCATTGTGGGTGATGGCTGAAACGCT
GCTGGAGAGCATGTGCTGA

Upstream 100 bases:

>100_bases
TCAGGCAATAAACGTCTTCATTTCATCCATCAGGCCGCGTCTTCTCCGGGAGACGCGGCCTTTTCGTTTATACCGCTAAC
TCATTCATAAGGAGCAAATA

Downstream 100 bases:

>100_bases
TGCCTTTTCCCTGAAAGCGCAGTTCTGACTCACGTCTGTCCCTTCCCCCGGGGTTTCTTCCATTCATTTACTTTTTATAA
GGAATAATCTCATGACAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MRLASRFGHVNQIRRDRPLTHEELMHYVPSIFGEDRHTSRSERYAYIPTITVLESLQREGFQPFFACQTRVRDPGRRGYT
KHMLRLRRDGEINGQHVPEIILLNSHDGTSSYQMLPGYFRAICTNGLVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFD
RIEEKRDAMQSLILPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSARGK
RIHTRAIHSIDTDIKLNRALWVMAETLLESMC

Sequences:

>Translated_272_residues
MRLASRFGHVNQIRRDRPLTHEELMHYVPSIFGEDRHTSRSERYAYIPTITVLESLQREGFQPFFACQTRVRDPGRRGYT
KHMLRLRRDGEINGQHVPEIILLNSHDGTSSYQMLPGYFRAICTNGLVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFD
RIEEKRDAMQSLILPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSARGK
RIHTRAIHSIDTDIKLNRALWVMAETLLESMC
>Mature_272_residues
MRLASRFGHVNQIRRDRPLTHEELMHYVPSIFGEDRHTSRSERYAYIPTITVLESLQREGFQPFFACQTRVRDPGRRGYT
KHMLRLRRDGEINGQHVPEIILLNSHDGTSSYQMLPGYFRAICTNGLVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFD
RIEEKRDAMQSLILPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSARGK
RIHTRAIHSIDTDIKLNRALWVMAETLLESMC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0380 family [H]

Homologues:

Organism=Escherichia coli, GI1788987, Length=270, Percent_Identity=74.0740740740741, Blast_Score=437, Evalue=1e-124,
Organism=Escherichia coli, GI87081705, Length=270, Percent_Identity=74.8148148148148, Blast_Score=422, Evalue=1e-119,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009276 [H]

Pfam domain/function: PF06067 DUF932 [H]

EC number: NA

Molecular weight: Translated: 31172; Mature: 31172

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLASRFGHVNQIRRDRPLTHEELMHYVPSIFGEDRHTSRSERYAYIPTITVLESLQREG
CCHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHCC
FQPFFACQTRVRDPGRRGYTKHMLRLRRDGEINGQHVPEIILLNSHDGTSSYQMLPGYFR
CCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHH
AICTNGLVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFDRIEEKRDAMQSLILPPPARQ
HHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSARGK
HHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
RIHTRAIHSIDTDIKLNRALWVMAETLLESMC
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLASRFGHVNQIRRDRPLTHEELMHYVPSIFGEDRHTSRSERYAYIPTITVLESLQREG
CCHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHCC
FQPFFACQTRVRDPGRRGYTKHMLRLRRDGEINGQHVPEIILLNSHDGTSSYQMLPGYFR
CCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHH
AICTNGLVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFDRIEEKRDAMQSLILPPPARQ
HHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSARGK
HHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
RIHTRAIHSIDTDIKLNRALWVMAETLLESMC
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]