| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yfjX [H]
Identifier: 218691141
GI number: 218691141
Start: 3423182
End: 3423667
Strand: Direct
Name: yfjX [H]
Synonym: ECED1_3488
Alternate gene names: 218691141
Gene position: 3423182-3423667 (Clockwise)
Preceding gene: 218691140
Following gene: 218691142
Centisome position: 65.71
GC content: 55.14
Gene sequence:
>486_bases ATGACAACCGTCTCGCATAATTCCACCACTCCTTCTGTTTCCGTAACCGCTGCATCAGGGAATGACCAGCCTCAGTTGGT TGCCACCATAGTCCCTGATGAACAGCGCATCAGCTTCTGGCCGCAGCATTTTGGCCTCATTCCACAGTGGGTGACCCTGG AGCCCCGTGTCTTCGGCTGGATGGACCGTCTGTGTGAAGACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAACAAC GGTGGCGCATTTATGGCACCCGAACCGGATGACGATGATGACGAAACATGGGTGCTGTTTAACGTCATGAACGGTAACCG CGCTGAAATGAGCCCGGAAGCCGCCGGCATTGCCGCCTGTCTGATGACGTACAGTCATCATGCCTGTCGTACGGAGTGTT ATGCCATGACGGTCCATTATTACCGGCTGCGGGATTACGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATCATC GACTGA
Upstream 100 bases:
>100_bases ATGTGCTGATGCCTTTTCCCTGAAAGCGCAGTTCTGACTCACGTCTGTCCCTTCCCCCGGGGTTTCTTCCATTCATTTAC TTTTTATAAGGAATAATCTC
Downstream 100 bases:
>100_bases ATGGAGGCAGGGACAATGCAGCAGCTTTCCTTTCTGCCCGGAGAAATGACAACCAGAGAGCGCAGTCTCATTCTGCGGGC CCTGAAAACCCTGGACCGCC
Product: putative antirestriction protein (klcA-like)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTTVSHNSTTPSVSVTAASGNDQPQLVATIVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNN GGAFMAPEPDDDDDETWVLFNVMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRII D
Sequences:
>Translated_161_residues MTTVSHNSTTPSVSVTAASGNDQPQLVATIVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNN GGAFMAPEPDDDDDETWVLFNVMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRII D >Mature_160_residues TTVSHNSTTPSVSVTAASGNDQPQLVATIVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNG GAFMAPEPDDDDDETWVLFNVMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the antirestriction protein family [H]
Homologues:
Organism=Escherichia coli, GI1788996, Length=154, Percent_Identity=68.8311688311688, Blast_Score=223, Evalue=6e-60, Organism=Escherichia coli, GI1786442, Length=153, Percent_Identity=66.6666666666667, Blast_Score=220, Evalue=4e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004914 - ProDom: PD012854 [H]
Pfam domain/function: PF03230 Antirestrict [H]
EC number: NA
Molecular weight: Translated: 18183; Mature: 18051
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVSHNSTTPSVSVTAASGNDQPQLVATIVPDEQRISFWPQHFGLIPQWVTLEPRVFGW CCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCHHEECHHHCCCCCCEEEECCHHHHH MDRLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNVMNGNRAEMSPEAAGIAAC HHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHH LMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID HHHHCCCHHHHEEEEEEHHHHHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure TTVSHNSTTPSVSVTAASGNDQPQLVATIVPDEQRISFWPQHFGLIPQWVTLEPRVFGW CCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCHHEECHHHCCCCCCEEEECCHHHHH MDRLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNVMNGNRAEMSPEAAGIAAC HHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHH LMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID HHHHCCCHHHHEEEEEEHHHHHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]