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The map label for this gene is csoS1A [H]

Identifier: 218691128

GI number: 218691128

Start: 3410721

End: 3411362

Strand: Direct

Name: csoS1A [H]

Synonym: ECED1_3472

Alternate gene names: 218691128

Gene position: 3410721-3411362 (Clockwise)

Preceding gene: 218691127

Following gene: 218691132

Centisome position: 65.47

GC content: 52.49

Gene sequence:

>642_bases
GTGGGAAGTTACGGACAAAGCGGCGCTATTATACGAAGACGTTGGACGTTAAGCCGACGACGCGCAGCACAGTTGAATTT
ATTACAGGAGAAATTTATGTCTGGGAAAAGTTTAGGCTTAATCGAAACCGTCGGGATGTCTGCGGCGGTAGAAGCCGCCG
ATGCCGCAATGAAATCCGCTAACGTTAGTCTGGTAGGCTATGAATTGACGAAAGGCGGCGGGATGGTGACCGTGAAGCTG
GAAGGGGAAGTGGGCGCAATTAACGCGGCGGTAGCGGCAGCCATCAGCGCGGCAAGCCGGGTTGGCGAGGTGTATGCCCA
TAAGGTGATCGCCCGCACCGCGCAGCATATCGAGCAGATTATTCACTCTAAAGTGACCGCCGGCGTCGCAGAACCTCAAC
CTGAAGTGCCTGCTGCACAACCGACACTGCAGGCTGAAAACGCGCCTTCACAGACATTCCCGGTGGTTAACCTTGATACG
TCAATCAGCGCATCCTGTATGGATGTCACTGATGAAACGCTGAAGTCCGTGGAGCAGCATCAACCAGTTAAACCCTCAAT
AGAAAACACTAAACCTACAAAATCTGATGTACCGCAGGAGGCAGCAAAGAAAGGTCCTCGTTCCAGCGGCAAGAAAAAAT
AA

Upstream 100 bases:

>100_bases
TCGATCTTAGCGTGTTCGGCATCATTACTACGCTTGATCTGCTGGTCCCCCGCTATCGTAAAACAGCCTGCTATGGTCAC
TTTGGTCGCGACAGCTTTCC

Downstream 100 bases:

>100_bases
GTAAATTGCTATGACGCTGCCGCGGTAACAATTTCTTTATCGCGGCATTTTTTTGCTTAACAGATAAAGTAAAAAACCAT
CTGCATAGCGGGCGGCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MGSYGQSGAIIRRRWTLSRRRAAQLNLLQEKFMSGKSLGLIETVGMSAAVEAADAAMKSANVSLVGYELTKGGGMVTVKL
EGEVGAINAAVAAAISAASRVGEVYAHKVIARTAQHIEQIIHSKVTAGVAEPQPEVPAAQPTLQAENAPSQTFPVVNLDT
SISASCMDVTDETLKSVEQHQPVKPSIENTKPTKSDVPQEAAKKGPRSSGKKK

Sequences:

>Translated_213_residues
MGSYGQSGAIIRRRWTLSRRRAAQLNLLQEKFMSGKSLGLIETVGMSAAVEAADAAMKSANVSLVGYELTKGGGMVTVKL
EGEVGAINAAVAAAISAASRVGEVYAHKVIARTAQHIEQIIHSKVTAGVAEPQPEVPAAQPTLQAENAPSQTFPVVNLDT
SISASCMDVTDETLKSVEQHQPVKPSIENTKPTKSDVPQEAAKKGPRSSGKKK
>Mature_212_residues
GSYGQSGAIIRRRWTLSRRRAAQLNLLQEKFMSGKSLGLIETVGMSAAVEAADAAMKSANVSLVGYELTKGGGMVTVKLE
GEVGAINAAVAAAISAASRVGEVYAHKVIARTAQHIEQIIHSKVTAGVAEPQPEVPAAQPTLQAENAPSQTFPVVNLDTS
ISASCMDVTDETLKSVEQHQPVKPSIENTKPTKSDVPQEAAKKGPRSSGKKK

Specific function: Involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 22373; Mature: 22242

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSYGQSGAIIRRRWTLSRRRAAQLNLLQEKFMSGKSLGLIETVGMSAAVEAADAAMKSA
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHC
NVSLVGYELTKGGGMVTVKLEGEVGAINAAVAAAISAASRVGEVYAHKVIARTAQHIEQI
CEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHSKVTAGVAEPQPEVPAAQPTLQAENAPSQTFPVVNLDTSISASCMDVTDETLKSVEQH
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHC
QPVKPSIENTKPTKSDVPQEAAKKGPRSSGKKK
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GSYGQSGAIIRRRWTLSRRRAAQLNLLQEKFMSGKSLGLIETVGMSAAVEAADAAMKSA
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHC
NVSLVGYELTKGGGMVTVKLEGEVGAINAAVAAAISAASRVGEVYAHKVIARTAQHIEQI
CEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHSKVTAGVAEPQPEVPAAQPTLQAENAPSQTFPVVNLDTSISASCMDVTDETLKSVEQH
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHC
QPVKPSIENTKPTKSDVPQEAAKKGPRSSGKKK
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934888 [H]