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The map label for this gene is ppdA [H]

Identifier: 218690952

GI number: 218690952

Start: 3226479

End: 3226949

Strand: Reverse

Name: ppdA [H]

Synonym: ECED1_3282

Alternate gene names: 218690952

Gene position: 3226949-3226479 (Counterclockwise)

Preceding gene: 218690953

Following gene: 218690951

Centisome position: 61.94

GC content: 54.14

Gene sequence:

>471_bases
ATGAAAACACAACGTGGTTATACGCTGATTGAAACGCTGGTCGCGATGCTGATTCTGGTCATGCTAAGCGCAAGTGGGCT
TTATGGCTGGCAATACTGGCAGCAGTCGCAACGGCTTTGGCAAACCGCCAGCCAGGCGCGGGACTATTTGCTCTATTTAC
GTGAAGATGCCAACTGGCATAACCGCGACCACAGTATCAGTCTTATCAGGGAGGGGACGTTATGGTGCCTTGTGAGTTCC
GTTGCTGGGGCGAATACCTGTCATGGCAGTTCACCATTGGTCTTTGTGCCGCGCTGGCCCGAAGTCGAAATGAGCGACCT
GACACCTTCGCTTGCTTTCTTTGGCCTGCGCAATACCGCATGGGCCGGGCATATTCGCTTCAAAAACTCAACGGGCGAGT
GGTGGCTGGTGGTTTCGCCGTGGGGAAGACTCCGGCTTTGTCAGCAAGGAGAAACAGAAGGATGCCTGTAA

Upstream 100 bases:

>100_bases
ATTTTGCAACGTCCTGCAACGGCGTAAATAGTCCGGAAGATGCGCCGAAGAAATAGAAACTGGCCCTCGTCTTTTTTTCT
CCTCGCTCCATACTGCCGGC

Downstream 100 bases:

>100_bases
AAGAGCAAGGTTTTTCTCTGCTGGAAGTGTTGATTGCTATGGCGATCAGTAGCGTATTGTTGCTGGGGGCTGCACGCTTT
CTGCCTGCGTTACAGCGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTASQARDYLLYLREDANWHNRDHSISLIREGTLWCLVSS
VAGANTCHGSSPLVFVPRWPEVEMSDLTPSLAFFGLRNTAWAGHIRFKNSTGEWWLVVSPWGRLRLCQQGETEGCL

Sequences:

>Translated_156_residues
MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTASQARDYLLYLREDANWHNRDHSISLIREGTLWCLVSS
VAGANTCHGSSPLVFVPRWPEVEMSDLTPSLAFFGLRNTAWAGHIRFKNSTGEWWLVVSPWGRLRLCQQGETEGCL
>Mature_156_residues
MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTASQARDYLLYLREDANWHNRDHSISLIREGTLWCLVSS
VAGANTCHGSSPLVFVPRWPEVEMSDLTPSLAFFGLRNTAWAGHIRFKNSTGEWWLVVSPWGRLRLCQQGETEGCL

Specific function: Not yet known [H]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789190, Length=156, Percent_Identity=98.7179487179487, Blast_Score=319, Evalue=5e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 17908; Mature: 17908

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTASQARDYLLYLREDANWH
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
NRDHSISLIREGTLWCLVSSVAGANTCHGSSPLVFVPRWPEVEMSDLTPSLAFFGLRNTA
CCCCEEEEEECCHHEEEEHHHCCCCCCCCCCCEEEECCCCCCCHHHCCCHHHHHCCCCCC
WAGHIRFKNSTGEWWLVVSPWGRLRLCQQGETEGCL
EEEEEEEECCCCCEEEEECCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTASQARDYLLYLREDANWH
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
NRDHSISLIREGTLWCLVSSVAGANTCHGSSPLVFVPRWPEVEMSDLTPSLAFFGLRNTA
CCCCEEEEEECCHHEEEEHHHCCCCCCCCCCCEEEECCCCCCCHHHCCCHHHHHCCCCCC
WAGHIRFKNSTGEWWLVVSPWGRLRLCQQGETEGCL
EEEEEEEECCCCCEEEEECCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3520484; 9278503; 7934814 [H]