| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yfcZ
Identifier: 218690502
GI number: 218690502
Start: 2747148
End: 2747432
Strand: Reverse
Name: yfcZ
Synonym: ECED1_2806
Alternate gene names: 218690502
Gene position: 2747432-2747148 (Counterclockwise)
Preceding gene: 218690504
Following gene: 218690501
Centisome position: 52.74
GC content: 51.93
Gene sequence:
>285_bases ATGAGTAAATGTAGTGCTGATGAAACCCCGGTTTGCTGCTGTATGGATGTTGGCACCATTATGGACAACTCCGACTGCAC CGCGTCTTACAGCCGTGTGTTTGCAAACCGCGCAGAAGCAGAACAAACGCTGGCGGCGCTGACTGAAAAAGCCCGTAGCG TGGAATCCGAACCGTGCAAAATCACCCCGACTTTCACTGAAGAGTCTGACGGTGTGCGCCTGGATATCGATTTCACTTTT GCCTGCGAAGCTGAAATGCTGATCTTCCAGCTGGGTCTGCGTTAA
Upstream 100 bases:
>100_bases GATTTTGCAGAATTAACAACTGGAGCAGCACTTTCCGGAAGCGTAAAATATCCACAACGTTTATCTGGCACCTTGGGTGC ACATACAGAGGAAATCAACG
Downstream 100 bases:
>100_bases TTCCTCTCGGGTACATACGCCCCTGTCAGTTGCTGGCAGGGGCGTTTTCTTTTCTCTTCTTCTTTTCTCTCTGTGTCATA GCTCCCACTTTCCCTTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTLAALTEKARSVESEPCKITPTFTEESDGVRLDIDFTF ACEAEMLIFQLGLR
Sequences:
>Translated_94_residues MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTLAALTEKARSVESEPCKITPTFTEESDGVRLDIDFTF ACEAEMLIFQLGLR >Mature_93_residues SKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTLAALTEKARSVESEPCKITPTFTEESDGVRLDIDFTFA CEAEMLIFQLGLR
Specific function: Unknown
COG id: COG3691
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0381 family
Homologues:
Organism=Escherichia coli, GI87082087, Length=94, Percent_Identity=100, Blast_Score=191, Evalue=6e-51, Organism=Escherichia coli, GI1790357, Length=84, Percent_Identity=42.8571428571429, Blast_Score=72, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YFCZ_ECOL6 (P0AD34)
Other databases:
- EMBL: AE014075 - RefSeq: NP_754770.1 - ProteinModelPortal: P0AD34 - SMR: P0AD34 - EnsemblBacteria: EBESCT00000044356 - GeneID: 1038456 - GenomeReviews: AE014075_GR - KEGG: ecc:c2888 - GeneTree: EBGT00050000010248 - HOGENOM: HBG298790 - OMA: CVDVGTI - ProtClustDB: CLSK2517913 - InterPro: IPR005272 - TIGRFAMs: TIGR00743
Pfam domain/function: PF04175 DUF406
EC number: NA
Molecular weight: Translated: 10318; Mature: 10186
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 11.7 %Cys+Met (Translated Protein) 7.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 10.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTLAALTEKARSVESEPCK CCCCCCCCCCEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE ITPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR EECCCCCCCCCEEEEEEEEEECCHHEEEEEECCC >Mature Secondary Structure SKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTLAALTEKARSVESEPCK CCCCCCCCCEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE ITPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR EECCCCCCCCCEEEEEEEEEECCHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157