| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218688099
Identifier: 218688099
GI number: 218688099
Start: 261004
End: 262488
Strand: Reverse
Name: 218688099
Synonym: ECED1_0238
Alternate gene names: NA
Gene position: 262488-261004 (Counterclockwise)
Preceding gene: 218688100
Following gene: 218688098
Centisome position: 5.04
GC content: 53.06
Gene sequence:
>1485_bases ATGTCAGTAAAGGAAGAAATTGCTCCCGTCAGCGCGTCTCAAACCGCCGCGCCCCCATCTCTGCTTGATGAAATCATGGC GCAAACCCGCGTCCAGCCTAAATCAGAAAGCTACGATATCACCCGCCAGGGCGTGAGCGCCTTTATTGCCGCCATGTTAC AGGGCGACAGTAGCGCTGAACCTATCAATATCCTGGCCGTTGACGCCATGATTGCTGATATTGATGCCCGAACCAGCAGG CAGATGGATGCCATTATTCATGCCCCGGAGTTTCAGGAACTGGAATCCCTGCTGCGCTCGCTGAAGCTGCTGGTTGAACG CGCGGATACACGGGAAAACATCAAAGTCCATTTCCTGAATGTCACTCAGGAAGAACTGCTGGATGATTTCGAATTTGCAC CTGAAATCACGCAGTCTGCATATTACAAGCATGTATATTCAAGCGGTTACGGACAATTTGGCGGTGAGCCAGTGGCGGCG GTAATCGGCAACTTTGCCTTTAAGAACACCACGCCGGATATGAAGCTGCTGAAATATATCAGCCAGGTCAGCGCGATGGC GCACAGCCCGTTCCTGTCGTCAGTATCATCCGAATTTTTCGGTCTGGATTCATGGACAGAGTTACCGGGGATCAAAGAAC CGGGTGCCATCTTTGAAGGCCCGGCCTACTCCCGCTGGCGCGCCCTGCGTGAATCGGAAGATTCCCGTTACCAGGGCCTG ACCGCCCCCCGGTTCCTGCTGCGCCACCCTTACTCACCGGATGAAAACCCTGTCAAAACCTTCCGTTACCATGAAGATGT CAGCCAGAGTCATGAGTCTTATCTGTGGGGGAATACCTCGTTTTTACTGGCCGCCAACCTGGCGGAAAGTTTTGCTAAGT ATCGCTGGTGCCCAAATATTATTGGCCCTTCCAGCGGCGGCGCAGTCAAAGACCTCCCGGTGCATCTGTATGAATCCATG GGGCAAATGCAGGCAAAAATTCCGACTGAAGTGTTGATCACTGACCGGAGAGAGTATGAGCTGGCGGAAGAGGGCTTTAT CACACTGACCATGCGTAAAGGGTCTGATAATGCGTGCTTTTTCTCGGCCAACTCGGTGCAGAAACCCAAAACATTCCCCA AAACCCCCGAAGGCAAGGCTGCGGAGACCAACTATAAACTCGGCACCCAGCTGCCATACTTGTTTGTTATCAGCAGGTTA GCGCATTACATCAAGGTAATTCAGCGCGAACAGCTTGGCTCATGGAAAGAACGTAGTGACCTGGAGCGTGAGCTGAACAC CTGGATTCGCCAGTATGTTGCTGACCAGGAAAATCCGCCTGCCGAAGTCCGCAGCCACCGGCCTTTGCGTCAGGCTAAGA TCGAGGTACTGGATGTGGATGGTGAGCCGGGCTGGTACCAGGTCGCGATTTCTGTCAGACCGCATTTTAAATACATGGGT GCCAGTTTCGACCTGAGCCTGGTCGGACGACTGGATAAGGAATAA
Upstream 100 bases:
>100_bases CAACTTCAGGCGCTACTGGAAAACGAAGACACCCGCGAGCAGCTGATCCAGGAACTGGGTATCGCCGTTCAGAAATAATT TTCACAGAAGGATATTCAGT
Downstream 100 bases:
>100_bases TCCGATGCTAAGACGGGATTCAGGACCAACCGGCAGTCTTTTTGAACGTATCCGTGAGGCGGCAAATCCGCCTTCATATC AGAATCCAAAAGAAGCACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MSVKEEIAPVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAEPINILAVDAMIADIDARTSR QMDAIIHAPEFQELESLLRSLKLLVERADTRENIKVHFLNVTQEELLDDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAA VIGNFAFKNTTPDMKLLKYISQVSAMAHSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYQGL TAPRFLLRHPYSPDENPVKTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNIIGPSSGGAVKDLPVHLYESM GQMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACFFSANSVQKPKTFPKTPEGKAAETNYKLGTQLPYLFVISRL AHYIKVIQREQLGSWKERSDLERELNTWIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMG ASFDLSLVGRLDKE
Sequences:
>Translated_494_residues MSVKEEIAPVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAEPINILAVDAMIADIDARTSR QMDAIIHAPEFQELESLLRSLKLLVERADTRENIKVHFLNVTQEELLDDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAA VIGNFAFKNTTPDMKLLKYISQVSAMAHSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYQGL TAPRFLLRHPYSPDENPVKTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNIIGPSSGGAVKDLPVHLYESM GQMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACFFSANSVQKPKTFPKTPEGKAAETNYKLGTQLPYLFVISRL AHYIKVIQREQLGSWKERSDLERELNTWIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMG ASFDLSLVGRLDKE >Mature_493_residues SVKEEIAPVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAEPINILAVDAMIADIDARTSRQ MDAIIHAPEFQELESLLRSLKLLVERADTRENIKVHFLNVTQEELLDDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAAV IGNFAFKNTTPDMKLLKYISQVSAMAHSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYQGLT APRFLLRHPYSPDENPVKTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNIIGPSSGGAVKDLPVHLYESMG QMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACFFSANSVQKPKTFPKTPEGKAAETNYKLGTQLPYLFVISRLA HYIKVIQREQLGSWKERSDLERELNTWIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMGA SFDLSLVGRLDKE
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55671; Mature: 55540
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKEEIAPVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAE CCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC PINILAVDAMIADIDARTSRQMDAIIHAPEFQELESLLRSLKLLVERADTRENIKVHFLN CEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC VTQEELLDDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAAVIGNFAFKNTTPDMKLLKYI CCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCHHHCCCCCHHHHHHHH SQVSAMAHSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYQGL HHHHHHHHCHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHCCC TAPRFLLRHPYSPDENPVKTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNI CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCC IGPSSGGAVKDLPVHLYESMGQMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACF CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCEEEEEEECCCCCEEE FSANSVQKPKTFPKTPEGKAAETNYKLGTQLPYLFVISRLAHYIKVIQREQLGSWKERSD EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LERELNTWIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMG HHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHCCEEEEECCCCCCEEEEEEEECCCCEECC ASFDLSLVGRLDKE CCCCHHHHCCCCCC >Mature Secondary Structure SVKEEIAPVSASQTAAPPSLLDEIMAQTRVQPKSESYDITRQGVSAFIAAMLQGDSSAE CCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC PINILAVDAMIADIDARTSRQMDAIIHAPEFQELESLLRSLKLLVERADTRENIKVHFLN CEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC VTQEELLDDFEFAPEITQSAYYKHVYSSGYGQFGGEPVAAVIGNFAFKNTTPDMKLLKYI CCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCHHHCCCCCHHHHHHHH SQVSAMAHSPFLSSVSSEFFGLDSWTELPGIKEPGAIFEGPAYSRWRALRESEDSRYQGL HHHHHHHHCHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHCCC TAPRFLLRHPYSPDENPVKTFRYHEDVSQSHESYLWGNTSFLLAANLAESFAKYRWCPNI CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCC IGPSSGGAVKDLPVHLYESMGQMQAKIPTEVLITDRREYELAEEGFITLTMRKGSDNACF CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCEEEEEEECCCCCEEE FSANSVQKPKTFPKTPEGKAAETNYKLGTQLPYLFVISRLAHYIKVIQREQLGSWKERSD EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LERELNTWIRQYVADQENPPAEVRSHRPLRQAKIEVLDVDGEPGWYQVAISVRPHFKYMG HHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHCCEEEEECCCCCCEEEEEEEECCCCEECC ASFDLSLVGRLDKE CCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA