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The map label for this gene is 218688100

Identifier: 218688100

GI number: 218688100

Start: 262511

End: 263065

Strand: Reverse

Name: 218688100

Synonym: ECED1_0239

Alternate gene names: NA

Gene position: 263065-262511 (Counterclockwise)

Preceding gene: 218688104

Following gene: 218688099

Centisome position: 5.05

GC content: 48.11

Gene sequence:

>555_bases
TTGTATGCAGTACGAAAATGCTGTGCTCATGGCCTGAACGGGAACATTTTTATGAGCAAAATGAACAACAATGGCGGCAG
TGTCGCGCCGAAAGAAAGAATCAGCGTTCGGTATACACCAAAAGTTGATGGGGTGGCTGCTGATATCGAATTGCCGCTGA
ATTTATTGATCACCGGCAATCTGAAAGGGAAACCAGATAACACGCCGTTGGATGAGCGAACTGCCATTGCTATCAACCGC
TATAACCTCAACGCAGTCATTTCAGAAGCTGACATTGAACGGGAGTTTGTTGTTCCGGCTGAACTCAGTGACGCTCCCAA
TGAGCAAATGTACGTCAACCTGAAAGTCAAATCTATGGATGACCTTTCTCCTGACCATATTGCCAGCCAGGTACCAGAAA
TAAAACGTCTGCTCGAATTGCGTGAAGCCCTGGTCGCACTTAAGTCTCCACTAGGCAATATTCCAGCCTTCCGCGCACAA
CTTCAGGCGCTACTGGAAAACGAAGACACCCGCGAGCAGCTGATCCAGGAACTGGGTATCGCCGTTCAGAAATAA

Upstream 100 bases:

>100_bases
TAAATAGTTCTTTTAATATTTTATTTCATGAGTAGAATACCGATCACAACAGAAGGAAGGTTACATTATCTAACTGCCAC
TGAAACGGTATTGTCGGTAT

Downstream 100 bases:

>100_bases
TTTTCACAGAAGGATATTCAGTATGTCAGTAAAGGAAGAAATTGCTCCCGTCAGCGCGTCTCAAACCGCCGCGCCCCCAT
CTCTGCTTGATGAAATCATG

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein; Type VI Secretion Protein VasQ; Type VI Secretion System Protein ImpB; Protein ImpB

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MYAVRKCCAHGLNGNIFMSKMNNNGGSVAPKERISVRYTPKVDGVAADIELPLNLLITGNLKGKPDNTPLDERTAIAINR
YNLNAVISEADIEREFVVPAELSDAPNEQMYVNLKVKSMDDLSPDHIASQVPEIKRLLELREALVALKSPLGNIPAFRAQ
LQALLENEDTREQLIQELGIAVQK

Sequences:

>Translated_184_residues
MYAVRKCCAHGLNGNIFMSKMNNNGGSVAPKERISVRYTPKVDGVAADIELPLNLLITGNLKGKPDNTPLDERTAIAINR
YNLNAVISEADIEREFVVPAELSDAPNEQMYVNLKVKSMDDLSPDHIASQVPEIKRLLELREALVALKSPLGNIPAFRAQ
LQALLENEDTREQLIQELGIAVQK
>Mature_184_residues
MYAVRKCCAHGLNGNIFMSKMNNNGGSVAPKERISVRYTPKVDGVAADIELPLNLLITGNLKGKPDNTPLDERTAIAINR
YNLNAVISEADIEREFVVPAELSDAPNEQMYVNLKVKSMDDLSPDHIASQVPEIKRLLELREALVALKSPLGNIPAFRAQ
LQALLENEDTREQLIQELGIAVQK

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20317; Mature: 20317

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAVRKCCAHGLNGNIFMSKMNNNGGSVAPKERISVRYTPKVDGVAADIELPLNLLITGN
CHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEECCEEEEEECC
LKGKPDNTPLDERTAIAINRYNLNAVISEADIEREFVVPAELSDAPNEQMYVNLKVKSMD
CCCCCCCCCCCCCEEEEEEEECCEEEEECCCCCCEEECCCCCCCCCCCEEEEEEEECCCC
DLSPDHIASQVPEIKRLLELREALVALKSPLGNIPAFRAQLQALLENEDTREQLIQELGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCC
AVQK
CCCC
>Mature Secondary Structure
MYAVRKCCAHGLNGNIFMSKMNNNGGSVAPKERISVRYTPKVDGVAADIELPLNLLITGN
CHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEECCEEEEEECC
LKGKPDNTPLDERTAIAINRYNLNAVISEADIEREFVVPAELSDAPNEQMYVNLKVKSMD
CCCCCCCCCCCCCEEEEEEEECCEEEEECCCCCCEEECCCCCCCCCCCEEEEEEEECCCC
DLSPDHIASQVPEIKRLLELREALVALKSPLGNIPAFRAQLQALLENEDTREQLIQELGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCC
AVQK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA