| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yadA [H]
Identifier: 218550880
GI number: 218550880
Start: 3681110
End: 3686497
Strand: Direct
Name: yadA [H]
Synonym: EFER_3596
Alternate gene names: 218550880
Gene position: 3681110-3686497 (Clockwise)
Preceding gene: 218550879
Following gene: 218550881
Centisome position: 80.22
GC content: 49.63
Gene sequence:
>5388_bases TTGAGAGCATCAATAATGAACAAAATATTTAAAGTTATCTGGAATCCAGCAACGGGCAGTTACAGCGTTGCCAGTGAAAC GGCGAAAAGCCGTGGTAAGAAGTCGGGGCGCAGTAAGCTGTTAATTTCTGCGTTGGTTGCGGGTGGGTTGTGGTCGTCGT TTGGGGCAAGTGCTACAGGTAACGCACCAGGTACCCCAGTTGGTTCTGGCGATAAATGGGTTGCTTTTGGGGAGAACTCA AAAGTAGATGCCAACACTACAAATACAAACGTAGAAAATCCATTAACGGGTGTCACAGAAGATGCCGCATCGGTAGCACT GGGCTATTATGCAGAAGCTCTGGGTTGGCGGAGTACCGCAATTGGCTCACGGAGCGAAGCAAGTGGTGAAAACTCAACCG CCATAGGGGTTGAAGCAAAGGCTACCGCTAAAAATACAACTGCTGTCGGAGATTTTGCTCAAGCAACGGGTAGTCACTCC ATGGCTCTTGGCGGCTATAGTGTTTCATCCGGGGTGGAAAGTCTTGCTGTAGGCCACGTTGCCAAAGCTACTGGTGAGTA CAATATCGCTATGGGTACGAATGCTACAACCGCAAATACGAATAGCATCGCTATTGGACGAGATACCGAGGCTGCGACAC AAGGGGTAGGTGAATCAAATACGGGGTACGCCTTGGCTATCGGCTCTGGTACGAAAGCTTACAAAGATTACACTATCGCA TTAGGACGCAATACGAAATCAAGTGCTGATTATGCAACTGCGATGGGATATATGGCAACTGCGTCCGGCACGAGCTCTTT ATCATTGGGGCAAAATGCCAAAGCAACTAACACAAACTCTATTGCAATAGGGTTAAACAGTAACGCGTCTACAATAAATG CTCTCGCTTTGGGTACTGATAGCAAGTCTTCTGGAGACAGCACTATTGCAATAGGCTTCGGAAGTAAAGCAGGCGGAACG GGAAGCATTGCCTTAGGTAGTAAGTCTTCTGCAGGTGGTAATAACAGTATTGCGCTTGGTGCAGATTCTGAAGCAAGTGA AGATAATACTGTGTCGGTAGGCTCTAGCTTGCTACAGCGTCGAATCGTCAATATGGCGGCAGGTGCGATTTCGTCAGACA GTAAAGAAGCCATTAATGGTTCCCAGCTTTACGCCATCAGCCAATCGGTAGCAACAAGATTAGGAGGTGGAGCCGGTGTC GCCTCGAACGGAACTTTAACCGCTATAAGCTTCAAGCTTAAACGCAGTGAGTACAGCACCGTTGGTGATGCGCTTCAAGG AATTGACAATGACACTCTTCATTGGGATGAAAATAACTCAGCTTTTAGCGCCAGCTATATTGTCAAAAATGCCGATGGTA CGATTACCAGCTCTGAAAAAGAAAACAAAATCATTAATGTGGAAGATGGCACCATTTCAGCCACCAGTACAGATGCCGTT AACGGCTCTCAACTGAACGCCACAAATACGCTCATTAACCAAATTGCCGGGAATACCAGCACAACCTATCTCCAGAATAA TGGCGCAGGCATCAACTATGTTCGCACCAACGACACAGGCCTGACCTTTAAAGATGCCAGTGCTTCGGGAGCTGGCGCGA CAGCTGTAGGATATAACGCTGTCGCCTCAGGCAAGAGTAGCGCGGCATTGGGCGACTCTTCACAAGCTACTGGCGAAGAT GCTTTAGCGCTTGGGCGGAGTGCGCTGGCGAGCAGCGCCGACGCGATTGCGATAGGTGCAGAGACCCAAGCTGCTGAAAA TGCTACCGCCATTGGCAATAGTGCGAAGGCAAAAGGGGCTAATAGCATAGCGCTGGGCGCTGGCAGCACCACTCAAGGTA ATAACACCATCGCATTAGGTGTAAACAGTTTTGCATTGGGTAATCAATCTTTGTCACTGGGGACCGCAACGCAAGCTAAG GGGGTTAATTCTACAGCCTTGGGTAATGCAAGCCTGGCATTGGGTGATTCCAGCCTGGCACTCGGCGATGCCAGTGAGGC CGAATCTGAATATAGTATCGCTATGGGGGCAACCGCTATAGCATCTGGCATTGACGCCATTGCTATAGGTCATAATAGCA AAGCCAGCGATGCAAATACGATTGCGTTGGGCAATGGCAGCCAGTCAAGCGGCTTAAACTCTATTGCCTTAGGTAAGGCC AGTGCTGTATCAGGCGATAATAGTCTTGCACTTGGTAGTAATACCAGCGCTGTCGGTATTAACTCCGTCGCACTGGGGGC TGGCTCTATTGCAGATCTGGAGGATAGCGTTTCTGTCGGCAACGACTCATTAAAACGCAAGATCGTAAATGTGAAAAATG GCACGATCAAAGCTGACAGCAATGACGCCATTAACGGTAGCCAGCTTTATAGTGTAAGTAACTCAGTTGCAACCTCGTTT GGTGGCGGTGCCACAGTAAGTGATACCGGCGTATTTACCGGCCCTAAATATAATATTGGTGGCAATGAATACACTAATGT TGGCGCGGCCCTTACCGCACTGGATAACGACGCCCTGTTATGGGATGCAACCGCTAAATCCAATGCTGGCGCATTCAGTG CTGGACATGGAAAAGACAATACTCCGAGCATCATTACCAACGTTGCTGATGGTCAGATTAATGAAAACAGCTCTGACGCC GTGAACGGCTCGCAGTTGTATGACCTGAAACAAGATGCCTTGCTGTGGAATAGCACAGCATTCAGCGCCAAACACGGCAC CAACGGTACTGACAGCAAAATCACCAACGTACTGGCAGGCACTGTATCTTCCACCAGCACCGATGCCATTAATGGTGGCC AGCTTTATAGTTTAGCCGATTCATTCACAACCTATCTCGGCGGTGGTGCCGATATCAGCGATACAGGAGCTCTCACCGGC CCGACCTACACCATCGGTTCGACGAAATACTACAACGTAGGTGATGCCCTGAATGCAATTAACTCATCGTTCAGCACTTC ACTTGGTGATGCCCTGCTGTGGGACGCTACAGCGAAAAAATTCAGCGCCATGCATGACGGCAAAGCCAGCGTGATCACTA ACGTTTCTGACGGTGCAATCTCTGAAAACAGTAGCGATGCTGTAAACGGCTCGCAACTCTATGACACGAGCAAGTACATT GCTGATGCCCTTGGTGGTGATGCAGAAGTTAACGCTGACGGTACTATCACTGCACCGACTTACACCATTGCTAATGCTGA TTACGATAACGTCGGTGAAGCTCTGGAGGCAATTGACACCACTCTCGATGATGCTTTGCTGTGGGATGCAACAGCTAATG GCGGTAAAGGTGCATTCAGCGCCGGTCGTGGGGTAGATAACACTGACAGTAAGATTACTAACGTCGCAAATGGTGCAATT TCCGCCACCAGCAGCGATGCCATTAACGGCTCACAACTCTATACCACTAATAAATATATCGCAGATGCTCTGGGCGGTGA TGCAGAAGTTAACGCTGACGGTACTATCACTGCGCCGACTTACACCATTGCGAATGCCGAGTACAACAATGTCGGTGAAG CTCTGGATGCACTCGATGATAACGCTCTGCTGTGGGATGCAACAGCCAATGACGGCAAAGGTGCCTACAACGCCAGCCAT GATGGCAAAGCCAGCATCATCACAAACGTTGCTGATGGTAACATTGGTGAAGGCAGCACCGACGCAGTTAACGGTTCTCA ACTGAATGCCGCTAACCTGCTGATCGAGCAAAATAGCCAAATCATCAATCAGCTTGCCGGAAACACCAATACGGACTACA TCGAAGAAAACGGTGCAGGTATTAACTATGTGCGTACCAATGACACCGGTTTAACCTTCACCGATGCCAGCGCAGCAGGT ATTGGCTCTACCGCTGTGGGTTATAACTCTGTTGCCAAAGGCGATAGCAGCGTAGCCATCGGTCAGGGCAGCTACAGCGA CGTTGATACGGGTATCGCTCTGGGTAGCAGTTCAGTCTCCAAGCGCGAAATAGTTAAAGGTTCTCGTGACACCAGCGTGT CGGAAGAAGGTGTTGTGATTGGTTATGACACAACTGACGGTGAACTGCTTGGTGCGTTGTCTATTGGTGATGACGGTAAA TATCGTCAAATCATCAACGTAGCCGATGGTTCCGAGGCCCATGATGCTGTTACGGTTCGACAGTTGCAGAATGCGATTGG TGCAGTCGCGACCACGCCGACTAAATACTTCCACGCTAATTCAACGGAAGAAGATTCACTGGCTGTAGGTACTGACTCGC TGGCAATGGGTGCGAAAACCATTGTGAATGGCGATAAAGGTATTGGTATCGGTTATGGTGCCTATGTGGAGGCCAATGCA CTTAACGGCATTGCCATCGGTAGCAATGCGCAAGTCATTCATGTCAACAGTATTGCGATAGGTAATGGTTCTACGACCAC TCGTGGCGCTCAAACCAATTACACCGCCTACAATATGGATGCACCGCAGAACTCTGTAGGTGAATTCTCTGTCGGCAACG AAGACGGTCAACGTCAGATCACCAACGTCGCAGCAGGTTCGGCGGATACCGATGCAGTTAACGTGGGTCAGTTGAAAGTC ACCGATGAGCGCGTAGCGCAAAATACCCAGAGCATTACTAACCTGAACACTCAGGTTACTAATCTGGATACTCGCGTGAC CAATATCGAAAATGGTATTGGCGATATCGTCACCACAGGTAGCACCAAGTACTTCAAGACCAACACCGATGGCGTAGATG CTAACGCGCAGGGTAAAGATAGCGTCGCAATTGGTTCCGGCTCCATTGCTGCCGCAGATAACAGCGTGGCACTGGGTACA GGCTCCGTGGCAACCGAAGAAAACACGATCTCTGTGGGTTCCTCCACCAATCAACGTCGTATCACCAACGTAGCCGCAGG TAAAAACGACACCGATGCTGTTAACGTGGCACAGTTGAAGTCTTCCGAAGCAGGCGGTGTGCGTTACGACACCAAAGCCG ATGGTTCTGTTGACTACAGCAACATCACCCTCGGTGGTAGCAGTGGCGGTACAACGCGTATCAGCAATGTTTCTGCTGGC GTAAACAACAACGACGCAGTGAACTATGCGCAGTTGAAGCAAAGCGTTCAGGAAAACAAGCAATACACCGATCAGCGTAT GGCTCAGATGGATCACAAACTGTCGAAAACCGAAAGCAAGTTAAGCGGTGGTATCGCTTCTGCAATGGCGATGACAGGCT TGCCGCAAGCTTACGAACCGGGTGCTAACATGGCCTCCATTGGTGGTGGTACATATAACGGTGAATCTGCCGTGGCATTA GGTGTGTCAATGGTCAGTGACAACGGTCGTTGGGTCTACAAATTACAAGGTAGTACCAATAGCCAGGGCGATTACTCAGC CGCAATTGGTGCCGGTATTCAGTGGTAA
Upstream 100 bases:
>100_bases TCAATATGGCCAATATCCAGTTCGACACTGTTCAACCTGCTGAAACTCAGCAGCGAAAAAACAAAAAATAAATGCAGCTT CTGCGCTTACTATCAAGGAA
Downstream 100 bases:
>100_bases TCATCCATTGAATGAGTGTGGCTAAGGGTAAACGCCAAATTACCTGAGACGTTACCTTATCAAGCCTGGAAGATGGTTCG CAAATACTTAAATTTGCACA
Product: protein; outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1795; Mature: 1795
Protein sequence:
>1795_residues MRASIMNKIFKVIWNPATGSYSVASETAKSRGKKSGRSKLLISALVAGGLWSSFGASATGNAPGTPVGSGDKWVAFGENS KVDANTTNTNVENPLTGVTEDAASVALGYYAEALGWRSTAIGSRSEASGENSTAIGVEAKATAKNTTAVGDFAQATGSHS MALGGYSVSSGVESLAVGHVAKATGEYNIAMGTNATTANTNSIAIGRDTEAATQGVGESNTGYALAIGSGTKAYKDYTIA LGRNTKSSADYATAMGYMATASGTSSLSLGQNAKATNTNSIAIGLNSNASTINALALGTDSKSSGDSTIAIGFGSKAGGT GSIALGSKSSAGGNNSIALGADSEASEDNTVSVGSSLLQRRIVNMAAGAISSDSKEAINGSQLYAISQSVATRLGGGAGV ASNGTLTAISFKLKRSEYSTVGDALQGIDNDTLHWDENNSAFSASYIVKNADGTITSSEKENKIINVEDGTISATSTDAV NGSQLNATNTLINQIAGNTSTTYLQNNGAGINYVRTNDTGLTFKDASASGAGATAVGYNAVASGKSSAALGDSSQATGED ALALGRSALASSADAIAIGAETQAAENATAIGNSAKAKGANSIALGAGSTTQGNNTIALGVNSFALGNQSLSLGTATQAK GVNSTALGNASLALGDSSLALGDASEAESEYSIAMGATAIASGIDAIAIGHNSKASDANTIALGNGSQSSGLNSIALGKA SAVSGDNSLALGSNTSAVGINSVALGAGSIADLEDSVSVGNDSLKRKIVNVKNGTIKADSNDAINGSQLYSVSNSVATSF GGGATVSDTGVFTGPKYNIGGNEYTNVGAALTALDNDALLWDATAKSNAGAFSAGHGKDNTPSIITNVADGQINENSSDA VNGSQLYDLKQDALLWNSTAFSAKHGTNGTDSKITNVLAGTVSSTSTDAINGGQLYSLADSFTTYLGGGADISDTGALTG PTYTIGSTKYYNVGDALNAINSSFSTSLGDALLWDATAKKFSAMHDGKASVITNVSDGAISENSSDAVNGSQLYDTSKYI ADALGGDAEVNADGTITAPTYTIANADYDNVGEALEAIDTTLDDALLWDATANGGKGAFSAGRGVDNTDSKITNVANGAI SATSSDAINGSQLYTTNKYIADALGGDAEVNADGTITAPTYTIANAEYNNVGEALDALDDNALLWDATANDGKGAYNASH DGKASIITNVADGNIGEGSTDAVNGSQLNAANLLIEQNSQIINQLAGNTNTDYIEENGAGINYVRTNDTGLTFTDASAAG IGSTAVGYNSVAKGDSSVAIGQGSYSDVDTGIALGSSSVSKREIVKGSRDTSVSEEGVVIGYDTTDGELLGALSIGDDGK YRQIINVADGSEAHDAVTVRQLQNAIGAVATTPTKYFHANSTEEDSLAVGTDSLAMGAKTIVNGDKGIGIGYGAYVEANA LNGIAIGSNAQVIHVNSIAIGNGSTTTRGAQTNYTAYNMDAPQNSVGEFSVGNEDGQRQITNVAAGSADTDAVNVGQLKV TDERVAQNTQSITNLNTQVTNLDTRVTNIENGIGDIVTTGSTKYFKTNTDGVDANAQGKDSVAIGSGSIAAADNSVALGT GSVATEENTISVGSSTNQRRITNVAAGKNDTDAVNVAQLKSSEAGGVRYDTKADGSVDYSNITLGGSSGGTTRISNVSAG VNNNDAVNYAQLKQSVQENKQYTDQRMAQMDHKLSKTESKLSGGIASAMAMTGLPQAYEPGANMASIGGGTYNGESAVAL GVSMVSDNGRWVYKLQGSTNSQGDYSAAIGAGIQW
Sequences:
>Translated_1795_residues MRASIMNKIFKVIWNPATGSYSVASETAKSRGKKSGRSKLLISALVAGGLWSSFGASATGNAPGTPVGSGDKWVAFGENS KVDANTTNTNVENPLTGVTEDAASVALGYYAEALGWRSTAIGSRSEASGENSTAIGVEAKATAKNTTAVGDFAQATGSHS MALGGYSVSSGVESLAVGHVAKATGEYNIAMGTNATTANTNSIAIGRDTEAATQGVGESNTGYALAIGSGTKAYKDYTIA LGRNTKSSADYATAMGYMATASGTSSLSLGQNAKATNTNSIAIGLNSNASTINALALGTDSKSSGDSTIAIGFGSKAGGT GSIALGSKSSAGGNNSIALGADSEASEDNTVSVGSSLLQRRIVNMAAGAISSDSKEAINGSQLYAISQSVATRLGGGAGV ASNGTLTAISFKLKRSEYSTVGDALQGIDNDTLHWDENNSAFSASYIVKNADGTITSSEKENKIINVEDGTISATSTDAV NGSQLNATNTLINQIAGNTSTTYLQNNGAGINYVRTNDTGLTFKDASASGAGATAVGYNAVASGKSSAALGDSSQATGED ALALGRSALASSADAIAIGAETQAAENATAIGNSAKAKGANSIALGAGSTTQGNNTIALGVNSFALGNQSLSLGTATQAK GVNSTALGNASLALGDSSLALGDASEAESEYSIAMGATAIASGIDAIAIGHNSKASDANTIALGNGSQSSGLNSIALGKA SAVSGDNSLALGSNTSAVGINSVALGAGSIADLEDSVSVGNDSLKRKIVNVKNGTIKADSNDAINGSQLYSVSNSVATSF GGGATVSDTGVFTGPKYNIGGNEYTNVGAALTALDNDALLWDATAKSNAGAFSAGHGKDNTPSIITNVADGQINENSSDA VNGSQLYDLKQDALLWNSTAFSAKHGTNGTDSKITNVLAGTVSSTSTDAINGGQLYSLADSFTTYLGGGADISDTGALTG PTYTIGSTKYYNVGDALNAINSSFSTSLGDALLWDATAKKFSAMHDGKASVITNVSDGAISENSSDAVNGSQLYDTSKYI ADALGGDAEVNADGTITAPTYTIANADYDNVGEALEAIDTTLDDALLWDATANGGKGAFSAGRGVDNTDSKITNVANGAI SATSSDAINGSQLYTTNKYIADALGGDAEVNADGTITAPTYTIANAEYNNVGEALDALDDNALLWDATANDGKGAYNASH DGKASIITNVADGNIGEGSTDAVNGSQLNAANLLIEQNSQIINQLAGNTNTDYIEENGAGINYVRTNDTGLTFTDASAAG IGSTAVGYNSVAKGDSSVAIGQGSYSDVDTGIALGSSSVSKREIVKGSRDTSVSEEGVVIGYDTTDGELLGALSIGDDGK YRQIINVADGSEAHDAVTVRQLQNAIGAVATTPTKYFHANSTEEDSLAVGTDSLAMGAKTIVNGDKGIGIGYGAYVEANA LNGIAIGSNAQVIHVNSIAIGNGSTTTRGAQTNYTAYNMDAPQNSVGEFSVGNEDGQRQITNVAAGSADTDAVNVGQLKV TDERVAQNTQSITNLNTQVTNLDTRVTNIENGIGDIVTTGSTKYFKTNTDGVDANAQGKDSVAIGSGSIAAADNSVALGT GSVATEENTISVGSSTNQRRITNVAAGKNDTDAVNVAQLKSSEAGGVRYDTKADGSVDYSNITLGGSSGGTTRISNVSAG VNNNDAVNYAQLKQSVQENKQYTDQRMAQMDHKLSKTESKLSGGIASAMAMTGLPQAYEPGANMASIGGGTYNGESAVAL GVSMVSDNGRWVYKLQGSTNSQGDYSAAIGAGIQW >Mature_1795_residues MRASIMNKIFKVIWNPATGSYSVASETAKSRGKKSGRSKLLISALVAGGLWSSFGASATGNAPGTPVGSGDKWVAFGENS KVDANTTNTNVENPLTGVTEDAASVALGYYAEALGWRSTAIGSRSEASGENSTAIGVEAKATAKNTTAVGDFAQATGSHS MALGGYSVSSGVESLAVGHVAKATGEYNIAMGTNATTANTNSIAIGRDTEAATQGVGESNTGYALAIGSGTKAYKDYTIA LGRNTKSSADYATAMGYMATASGTSSLSLGQNAKATNTNSIAIGLNSNASTINALALGTDSKSSGDSTIAIGFGSKAGGT GSIALGSKSSAGGNNSIALGADSEASEDNTVSVGSSLLQRRIVNMAAGAISSDSKEAINGSQLYAISQSVATRLGGGAGV ASNGTLTAISFKLKRSEYSTVGDALQGIDNDTLHWDENNSAFSASYIVKNADGTITSSEKENKIINVEDGTISATSTDAV NGSQLNATNTLINQIAGNTSTTYLQNNGAGINYVRTNDTGLTFKDASASGAGATAVGYNAVASGKSSAALGDSSQATGED ALALGRSALASSADAIAIGAETQAAENATAIGNSAKAKGANSIALGAGSTTQGNNTIALGVNSFALGNQSLSLGTATQAK GVNSTALGNASLALGDSSLALGDASEAESEYSIAMGATAIASGIDAIAIGHNSKASDANTIALGNGSQSSGLNSIALGKA SAVSGDNSLALGSNTSAVGINSVALGAGSIADLEDSVSVGNDSLKRKIVNVKNGTIKADSNDAINGSQLYSVSNSVATSF GGGATVSDTGVFTGPKYNIGGNEYTNVGAALTALDNDALLWDATAKSNAGAFSAGHGKDNTPSIITNVADGQINENSSDA VNGSQLYDLKQDALLWNSTAFSAKHGTNGTDSKITNVLAGTVSSTSTDAINGGQLYSLADSFTTYLGGGADISDTGALTG PTYTIGSTKYYNVGDALNAINSSFSTSLGDALLWDATAKKFSAMHDGKASVITNVSDGAISENSSDAVNGSQLYDTSKYI ADALGGDAEVNADGTITAPTYTIANADYDNVGEALEAIDTTLDDALLWDATANGGKGAFSAGRGVDNTDSKITNVANGAI SATSSDAINGSQLYTTNKYIADALGGDAEVNADGTITAPTYTIANAEYNNVGEALDALDDNALLWDATANDGKGAYNASH DGKASIITNVADGNIGEGSTDAVNGSQLNAANLLIEQNSQIINQLAGNTNTDYIEENGAGINYVRTNDTGLTFTDASAAG IGSTAVGYNSVAKGDSSVAIGQGSYSDVDTGIALGSSSVSKREIVKGSRDTSVSEEGVVIGYDTTDGELLGALSIGDDGK YRQIINVADGSEAHDAVTVRQLQNAIGAVATTPTKYFHANSTEEDSLAVGTDSLAMGAKTIVNGDKGIGIGYGAYVEANA LNGIAIGSNAQVIHVNSIAIGNGSTTTRGAQTNYTAYNMDAPQNSVGEFSVGNEDGQRQITNVAAGSADTDAVNVGQLKV TDERVAQNTQSITNLNTQVTNLDTRVTNIENGIGDIVTTGSTKYFKTNTDGVDANAQGKDSVAIGSGSIAAADNSVALGT GSVATEENTISVGSSTNQRRITNVAAGKNDTDAVNVAQLKSSEAGGVRYDTKADGSVDYSNITLGGSSGGTTRISNVSAG VNNNDAVNYAQLKQSVQENKQYTDQRMAQMDHKLSKTESKLSGGIASAMAMTGLPQAYEPGANMASIGGGTYNGESAVAL GVSMVSDNGRWVYKLQGSTNSQGDYSAAIGAGIQW
Specific function: Collagen-binding outer membrane protein forming a fibrillar matrix on the bacterial cell surface. Promotes initial attachment and invasion of eukaryotic cells. Also protects the bacteria by being responsible for agglutination, serum resistance, complement
COG id: COG5295
COG function: function code UW; Autotransporter adhesin
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the autotransporter-2 (TC 1.B.40) / oligomeric coiled-coil adhesin (Oca) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008640 - InterPro: IPR008635 - InterPro: IPR008126 - InterPro: IPR005594 [H]
Pfam domain/function: PF05658 Hep_Hag; PF05662 HIM; PF03895 YadA [H]
EC number: NA
Molecular weight: Translated: 179942; Mature: 179942
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRASIMNKIFKVIWNPATGSYSVASETAKSRGKKSGRSKLLISALVAGGLWSSFGASATG CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCCCC NAPGTPVGSGDKWVAFGENSKVDANTTNTNVENPLTGVTEDAASVALGYYAEALGWRSTA CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHC IGSRSEASGENSTAIGVEAKATAKNTTAVGDFAQATGSHSMALGGYSVSSGVESLAVGHV CCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCEEEECCEEHHHHHHHHHHHHH AKATGEYNIAMGTNATTANTNSIAIGRDTEAATQGVGESNTGYALAIGSGTKAYKDYTIA HHCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHCCCCCCCCEEEEECCCCCCCCEEEEE LGRNTKSSADYATAMGYMATASGTSSLSLGQNAKATNTNSIAIGLNSNASTINALALGTD ECCCCCCCCCHHHHHCEEEECCCCCCEECCCCCCCCCCCEEEEEECCCCCEEEEEEECCC SKSSGDSTIAIGFGSKAGGTGSIALGSKSSAGGNNSIALGADSEASEDNTVSVGSSLLQR CCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHH RIVNMAAGAISSDSKEAINGSQLYAISQSVATRLGGGAGVASNGTLTAISFKLKRSEYST HHHHHHHCCCCCCCHHHCCCCEEEEEHHHHHHHCCCCCCCCCCCEEEEEEEEEECCHHHH VGDALQGIDNDTLHWDENNSAFSASYIVKNADGTITSSEKENKIINVEDGTISATSTDAV HHHHHHCCCCCCEEECCCCCEEEEEEEEECCCCCEECCCCCCCEEEECCCEEEECCCCCC NGSQLNATNTLINQIAGNTSTTYLQNNGAGINYVRTNDTGLTFKDASASGAGATAVGYNA CCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCEEEECCCCCCCCCEEECCHH VASGKSSAALGDSSQATGEDALALGRSALASSADAIAIGAETQAAENATAIGNSAKAKGA HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHCCCCCCCCCC NSIALGAGSTTQGNNTIALGVNSFALGNQSLSLGTATQAKGVNSTALGNASLALGDSSLA CEEEECCCCCCCCCCEEEEECCEEEECCCCEECCCCHHCCCCCCCCCCCCEEEECCCCEE LGDASEAESEYSIAMGATAIASGIDAIAIGHNSKASDANTIALGNGSQSSGLNSIALGKA CCCCCCCCCCEEEEECHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCEEECCCC SAVSGDNSLALGSNTSAVGINSVALGAGSIADLEDSVSVGNDSLKRKIVNVKNGTIKADS EECCCCCCEEECCCCCEEECCEEEECCCCCCCCCHHHHCCCHHHHHEEEEECCCEEEECC NDAINGSQLYSVSNSVATSFGGGATVSDTGVFTGPKYNIGGNEYTNVGAALTALDNDALL CCCCCCCEEEEECCHHHHCCCCCCEECCCCCCCCCEECCCCCCCCCCCEEEEEECCCEEE WDATAKSNAGAFSAGHGKDNTPSIITNVADGQINENSSDAVNGSQLYDLKQDALLWNSTA EECCCCCCCCCEECCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCEECCCCCCEEECCCE FSAKHGTNGTDSKITNVLAGTVSSTSTDAINGGQLYSLADSFTTYLGGGADISDTGALTG ECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCC PTYTIGSTKYYNVGDALNAINSSFSTSLGDALLWDATAKKFSAMHDGKASVITNVSDGAI CEEEECCCEEEECCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCEEEEECCCCCC SENSSDAVNGSQLYDTSKYIADALGGDAEVNADGTITAPTYTIANADYDNVGEALEAIDT CCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCEEECCEEEEECCCHHHHHHHHHHHHH TLDDALLWDATANGGKGAFSAGRGVDNTDSKITNVANGAISATSSDAINGSQLYTTNKYI HHCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCCEEEECCHHH ADALGGDAEVNADGTITAPTYTIANAEYNNVGEALDALDDNALLWDATANDGKGAYNASH HHHCCCCCEECCCCEEECCEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC DGKASIITNVADGNIGEGSTDAVNGSQLNAANLLIEQNSQIINQLAGNTNTDYIEENGAG CCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCEEECCCCC INYVRTNDTGLTFTDASAAGIGSTAVGYNSVAKGDSSVAIGQGSYSDVDTGIALGSSSVS EEEEEECCCCEEEECCCCCCCCCCCCCCCHHCCCCCCEEECCCCCCCCCCCEEECCCCCC KREIVKGSRDTSVSEEGVVIGYDTTDGELLGALSIGDDGKYRQIINVADGSEAHDAVTVR HHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHH QLQNAIGAVATTPTKYFHANSTEEDSLAVGTDSLAMGAKTIVNGDKGIGIGYGAYVEANA HHHHHHHHEECCCCCEEECCCCCCCCEEECCCHHHHCCCEEECCCCCCEECCCCEEEECC LNGIAIGSNAQVIHVNSIAIGNGSTTTRGAQTNYTAYNMDAPQNSVGEFSVGNEDGQRQI CCCEEECCCCEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCCCHHHH TNVAAGSADTDAVNVGQLKVTDERVAQNTQSITNLNTQVTNLDTRVTNIENGIGDIVTTG HHHCCCCCCCCCEECCEEEECHHHHHHHHHHHHHCCCEEEECCEEEEHHCCCCCCEEECC STKYFKTNTDGVDANAQGKDSVAIGSGSIAAADNSVALGTGSVATEENTISVGSSTNQRR CCEEEEECCCCCCCCCCCCCCEEECCCCEEECCCCEEECCCCCCCCCCEEEECCCCCCEE ITNVAAGKNDTDAVNVAQLKSSEAGGVRYDTKADGSVDYSNITLGGSSGGTTRISNVSAG EEEEECCCCCCCCEEHHHHCCCCCCCEEECCCCCCCEEECEEEEECCCCCCEEEEEEECC VNNNDAVNYAQLKQSVQENKQYTDQRMAQMDHKLSKTESKLSGGIASAMAMTGLPQAYEP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC GANMASIGGGTYNGESAVALGVSMVSDNGRWVYKLQGSTNSQGDYSAAIGAGIQW CCCEEECCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCEEHHCCCCCCC >Mature Secondary Structure MRASIMNKIFKVIWNPATGSYSVASETAKSRGKKSGRSKLLISALVAGGLWSSFGASATG CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCCCC NAPGTPVGSGDKWVAFGENSKVDANTTNTNVENPLTGVTEDAASVALGYYAEALGWRSTA CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHC IGSRSEASGENSTAIGVEAKATAKNTTAVGDFAQATGSHSMALGGYSVSSGVESLAVGHV CCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCEEEECCEEHHHHHHHHHHHHH AKATGEYNIAMGTNATTANTNSIAIGRDTEAATQGVGESNTGYALAIGSGTKAYKDYTIA HHCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHCCCCCCCCEEEEECCCCCCCCEEEEE LGRNTKSSADYATAMGYMATASGTSSLSLGQNAKATNTNSIAIGLNSNASTINALALGTD ECCCCCCCCCHHHHHCEEEECCCCCCEECCCCCCCCCCCEEEEEECCCCCEEEEEEECCC SKSSGDSTIAIGFGSKAGGTGSIALGSKSSAGGNNSIALGADSEASEDNTVSVGSSLLQR CCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHH RIVNMAAGAISSDSKEAINGSQLYAISQSVATRLGGGAGVASNGTLTAISFKLKRSEYST HHHHHHHCCCCCCCHHHCCCCEEEEEHHHHHHHCCCCCCCCCCCEEEEEEEEEECCHHHH VGDALQGIDNDTLHWDENNSAFSASYIVKNADGTITSSEKENKIINVEDGTISATSTDAV HHHHHHCCCCCCEEECCCCCEEEEEEEEECCCCCEECCCCCCCEEEECCCEEEECCCCCC NGSQLNATNTLINQIAGNTSTTYLQNNGAGINYVRTNDTGLTFKDASASGAGATAVGYNA CCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCEEEECCCCCCCCCEEECCHH VASGKSSAALGDSSQATGEDALALGRSALASSADAIAIGAETQAAENATAIGNSAKAKGA HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHCCCCCCCCCC NSIALGAGSTTQGNNTIALGVNSFALGNQSLSLGTATQAKGVNSTALGNASLALGDSSLA CEEEECCCCCCCCCCEEEEECCEEEECCCCEECCCCHHCCCCCCCCCCCCEEEECCCCEE LGDASEAESEYSIAMGATAIASGIDAIAIGHNSKASDANTIALGNGSQSSGLNSIALGKA CCCCCCCCCCEEEEECHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCEEECCCC SAVSGDNSLALGSNTSAVGINSVALGAGSIADLEDSVSVGNDSLKRKIVNVKNGTIKADS EECCCCCCEEECCCCCEEECCEEEECCCCCCCCCHHHHCCCHHHHHEEEEECCCEEEECC NDAINGSQLYSVSNSVATSFGGGATVSDTGVFTGPKYNIGGNEYTNVGAALTALDNDALL CCCCCCCEEEEECCHHHHCCCCCCEECCCCCCCCCEECCCCCCCCCCCEEEEEECCCEEE WDATAKSNAGAFSAGHGKDNTPSIITNVADGQINENSSDAVNGSQLYDLKQDALLWNSTA EECCCCCCCCCEECCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCEECCCCCCEEECCCE FSAKHGTNGTDSKITNVLAGTVSSTSTDAINGGQLYSLADSFTTYLGGGADISDTGALTG ECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCC PTYTIGSTKYYNVGDALNAINSSFSTSLGDALLWDATAKKFSAMHDGKASVITNVSDGAI CEEEECCCEEEECCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCEEEEECCCCCC SENSSDAVNGSQLYDTSKYIADALGGDAEVNADGTITAPTYTIANADYDNVGEALEAIDT CCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCEEECCEEEEECCCHHHHHHHHHHHHH TLDDALLWDATANGGKGAFSAGRGVDNTDSKITNVANGAISATSSDAINGSQLYTTNKYI HHCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCCEEEECCHHH ADALGGDAEVNADGTITAPTYTIANAEYNNVGEALDALDDNALLWDATANDGKGAYNASH HHHCCCCCEECCCCEEECCEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC DGKASIITNVADGNIGEGSTDAVNGSQLNAANLLIEQNSQIINQLAGNTNTDYIEENGAG CCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCEEECCCCC INYVRTNDTGLTFTDASAAGIGSTAVGYNSVAKGDSSVAIGQGSYSDVDTGIALGSSSVS EEEEEECCCCEEEECCCCCCCCCCCCCCCHHCCCCCCEEECCCCCCCCCCCEEECCCCCC KREIVKGSRDTSVSEEGVVIGYDTTDGELLGALSIGDDGKYRQIINVADGSEAHDAVTVR HHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHH QLQNAIGAVATTPTKYFHANSTEEDSLAVGTDSLAMGAKTIVNGDKGIGIGYGAYVEANA HHHHHHHHEECCCCCEEECCCCCCCCEEECCCHHHHCCCEEECCCCCCEECCCCEEEECC LNGIAIGSNAQVIHVNSIAIGNGSTTTRGAQTNYTAYNMDAPQNSVGEFSVGNEDGQRQI CCCEEECCCCEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCCCHHHH TNVAAGSADTDAVNVGQLKVTDERVAQNTQSITNLNTQVTNLDTRVTNIENGIGDIVTTG HHHCCCCCCCCCEECCEEEECHHHHHHHHHHHHHCCCEEEECCEEEEHHCCCCCCEEECC STKYFKTNTDGVDANAQGKDSVAIGSGSIAAADNSVALGTGSVATEENTISVGSSTNQRR CCEEEEECCCCCCCCCCCCCCEEECCCCEEECCCCEEECCCCCCCCCCEEEECCCCCCEE ITNVAAGKNDTDAVNVAQLKSSEAGGVRYDTKADGSVDYSNITLGGSSGGTTRISNVSAG EEEEECCCCCCCCEEHHHHCCCCCCCEEECCCCCCCEEECEEEEECCCCCCEEEEEEECC VNNNDAVNYAQLKQSVQENKQYTDQRMAQMDHKLSKTESKLSGGIASAMAMTGLPQAYEP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCC GANMASIGGGTYNGESAVALGVSMVSDNGRWVYKLQGSTNSQGDYSAAIGAGIQW CCCEEECCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCEEHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2761389; 7934875; 2592347; 1548243 [H]