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The map label for this gene is ysaB [H]

Identifier: 218550846

GI number: 218550846

Start: 3645338

End: 3645640

Strand: Reverse

Name: ysaB [H]

Synonym: EFER_3562

Alternate gene names: 218550846

Gene position: 3645640-3645338 (Counterclockwise)

Preceding gene: 218550848

Following gene: 218550845

Centisome position: 79.45

GC content: 45.21

Gene sequence:

>303_bases
TTGATGATGATGAAGTATTGCTTTCCAGCAATAGTACTTATGTTGATGGCAGGATGTTCAACACCACCACCAGAACAGAA
AGCTCAAAGGGTTAAGGTTGATCCCATTCGGTCATTGAATATGGAAGAGCTATGCAGAGATCAGGCGGCAAAACGCTATA
ATACAGGTGCGCAAAAAATCGACGTCACCGCCTTCGAACAGTTCCAGGGAAGCTACGAAATGCGCGGTTATACCTTCCGG
AAAGAGCAGTTTGTCTGTTCTTTTGACGCGGATGGCCATTTTTTGCATCTTTCCATGCGCTAA

Upstream 100 bases:

>100_bases
TGAGTTTTATGGCTACAGATTATAATGGCTTGAGTAAAATCTTACCCCTCAGCCACTATACAGAACTCAATAATAAGACT
CACCTGCAAAAGACGGTAAT

Downstream 100 bases:

>100_bases
GGCCTGCCTTTTTCCCGTTTCGTACTGTATATCTTCCATCCAGCGGGTATACTGATCCCTTCCTTTAAATCCACACGTAT
CCAGCACGAAATAATATGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MMMMKYCFPAIVLMLMAGCSTPPPEQKAQRVKVDPIRSLNMEELCRDQAAKRYNTGAQKIDVTAFEQFQGSYEMRGYTFR
KEQFVCSFDADGHFLHLSMR

Sequences:

>Translated_100_residues
MMMMKYCFPAIVLMLMAGCSTPPPEQKAQRVKVDPIRSLNMEELCRDQAAKRYNTGAQKIDVTAFEQFQGSYEMRGYTFR
KEQFVCSFDADGHFLHLSMR
>Mature_100_residues
MMMMKYCFPAIVLMLMAGCSTPPPEQKAQRVKVDPIRSLNMEELCRDQAAKRYNTGAQKIDVTAFEQFQGSYEMRGYTFR
KEQFVCSFDADGHFLHLSMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082291, Length=99, Percent_Identity=84.8484848484848, Blast_Score=181, Evalue=8e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11600; Mature: 11600

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
9.0 %Met     (Translated Protein)
13.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
9.0 %Met     (Mature Protein)
13.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMMKYCFPAIVLMLMAGCSTPPPEQKAQRVKVDPIRSLNMEELCRDQAAKRYNTGAQKI
CCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE
DVTAFEQFQGSYEMRGYTFRKEQFVCSFDADGHFLHLSMR
EHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCEEEEEEC
>Mature Secondary Structure
MMMMKYCFPAIVLMLMAGCSTPPPEQKAQRVKVDPIRSLNMEELCRDQAAKRYNTGAQKI
CCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE
DVTAFEQFQGSYEMRGYTFRKEQFVCSFDADGHFLHLSMR
EHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]