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The map label for this gene is yiaB [H]

Identifier: 218550848

GI number: 218550848

Start: 3646869

End: 3647252

Strand: Reverse

Name: yiaB [H]

Synonym: EFER_3564

Alternate gene names: 218550848

Gene position: 3647252-3646869 (Counterclockwise)

Preceding gene: 218550849

Following gene: 218550846

Centisome position: 79.48

GC content: 41.41

Gene sequence:

>384_bases
TTGCTCGTAATGTATCCCCGTCATAGAGATAGGGAGGTCACAATGCAAATTTCAAAGGCAGTAGCAAGAGTATTATTTTT
TACTGGTGCGTTGGTCTACCTGGCGGGGCTATGGTATTCATGCCCTCTGTTGAGTGGGAAAGGCTATTTTCTGGGCGTGT
TAATGACAGGCACATTTGTGACTTACTCATATCTACGTGCAGAAAGATTCAGCAATATAGATGAAACATTTTCTCGTATC
TGCCAGTTCGTTGCACTACTTACTGTTGGTCTGTTGTTTCTCGGTGTCAGGAATGCCCCCATTAATGTTTATGAAATGGT
GATATATCCTGTTGCTTTTTTCGTCAGTATATTTGGTCAAATAAAGTTAATGCGTGCGGAGTAA

Upstream 100 bases:

>100_bases
TTTATCCAATCTATATATTTTTTAAATCAATAAAAATTTAATATGAATGTATTCTGAAAATCATTTGTTAATGGTATTTT
TCAGTTTTGTCTTGTGTTAG

Downstream 100 bases:

>100_bases
TGTTATATTCTCACTGGTTCGAGTATAAGCCTGAAAGGTATTCTACTTTTCAGGCTAATGGTTGCTAACTGACCAGTCTT
CTGCGATCAATTTTTTGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MLVMYPRHRDREVTMQISKAVARVLFFTGALVYLAGLWYSCPLLSGKGYFLGVLMTGTFVTYSYLRAERFSNIDETFSRI
CQFVALLTVGLLFLGVRNAPINVYEMVIYPVAFFVSIFGQIKLMRAE

Sequences:

>Translated_127_residues
MLVMYPRHRDREVTMQISKAVARVLFFTGALVYLAGLWYSCPLLSGKGYFLGVLMTGTFVTYSYLRAERFSNIDETFSRI
CQFVALLTVGLLFLGVRNAPINVYEMVIYPVAFFVSIFGQIKLMRAE
>Mature_127_residues
MLVMYPRHRDREVTMQISKAVARVLFFTGALVYLAGLWYSCPLLSGKGYFLGVLMTGTFVTYSYLRAERFSNIDETFSRI
CQFVALLTVGLLFLGVRNAPINVYEMVIYPVAFFVSIFGQIKLMRAE

Specific function: Unknown

COG id: COG4682

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082293, Length=112, Percent_Identity=68.75, Blast_Score=167, Evalue=3e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008024 [H]

Pfam domain/function: PF05360 YiaAB [H]

EC number: NA

Molecular weight: Translated: 14502; Mature: 14502

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVMYPRHRDREVTMQISKAVARVLFFTGALVYLAGLWYSCPLLSGKGYFLGVLMTGTFV
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
TYSYLRAERFSNIDETFSRICQFVALLTVGLLFLGVRNAPINVYEMVIYPVAFFVSIFGQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
IKLMRAE
HHEEECC
>Mature Secondary Structure
MLVMYPRHRDREVTMQISKAVARVLFFTGALVYLAGLWYSCPLLSGKGYFLGVLMTGTFV
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
TYSYLRAERFSNIDETFSRICQFVALLTVGLLFLGVRNAPINVYEMVIYPVAFFVSIFGQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
IKLMRAE
HHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]