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The map label for this gene is yiaF [H]

Identifier: 218550839

GI number: 218550839

Start: 3637641

End: 3638411

Strand: Reverse

Name: yiaF [H]

Synonym: EFER_3555

Alternate gene names: 218550839

Gene position: 3638411-3637641 (Counterclockwise)

Preceding gene: 218550843

Following gene: 218550832

Centisome position: 79.29

GC content: 46.82

Gene sequence:

>771_bases
TTGTCAACGTCAGACACGCATGTGTCGTTGTGCGCATTTTTGGGTGAAAGGAGTATAAAAATGGCGACAGGTAAGTCCTG
CTCTCGCTGGTTTGCGCCTATTGCGGCGTTATTAATGGTTATTAGCCTGAGTGGGTGTTTTGATAAAGAAGGCGATCAGC
GCAAAGCGTTCATCGATTTCCTGGATAATACAGTCATGCGTAGTAATGAACGGATACCGACTTTAACTGCCGATCAGAAA
AAGCAGTTTGGTCCGTTTGTTAATGATTACGCCGTTTTGTACGGTTACTCACAGCAGGTAAATCAGGCGATTGATTCTGG
TTTGCGTCCGGTCGTCGATAGTGTAAATGCGATTCGTGTACCGCAGGACTATATGACTCAGCGTGTTGCACTGCGCGATC
TGAATGGTTCATTAGGTGTGCTGGCGCAGCAATTGCAGAATGCAAAATTGCAGGCGGATGCTGCTCATGGCGCACTTAAG
CAGTCTGAAGATTTAAAACCGGTATTTGATAAGGCATTTAATAAAGTGGTGACGCTTCCAGCCGAAGCACTGCAGCCGAT
GATCCCGGTAGCGCAGACCTTTACCCAGCAGCTGGTGCAGGTGGGTGATTATATTGCTCAGCAGGGTACTCAGGTTAGCT
TTGTGGCAAATGGTATTCAATTCCCGACCTCTCAACAGGCAAGTGAATACAATAAGCTAATCGCGCCACTGGCAACTCAG
CATCAGGAATTTATTCAAGCCTGGACGAAAGTAAAAAGCGCAACTGAATAA

Upstream 100 bases:

>100_bases
GTAACAAATTTATAACATTTAAAAGTGCCAGCCAGAAAACGAATTTTTCCCTGCAAGATTATGCGGAAAGGGTATCCTGC
AAGCCTGACCTGGACTATCC

Downstream 100 bases:

>100_bases
TAATTTTAATGCCCGATAATGCTTCGGGCATTAATTAAGTCTATTTATTCAACAATCTGATACCGGAGTGGATATACCCC
TCCGGTATTTTTTTACTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSTSDTHVSLCAFLGERSIKMATGKSCSRWFAPIAALLMVISLSGCFDKEGDQRKAFIDFLDNTVMRSNERIPTLTADQK
KQFGPFVNDYAVLYGYSQQVNQAIDSGLRPVVDSVNAIRVPQDYMTQRVALRDLNGSLGVLAQQLQNAKLQADAAHGALK
QSEDLKPVFDKAFNKVVTLPAEALQPMIPVAQTFTQQLVQVGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLATQ
HQEFIQAWTKVKSATE

Sequences:

>Translated_256_residues
MSTSDTHVSLCAFLGERSIKMATGKSCSRWFAPIAALLMVISLSGCFDKEGDQRKAFIDFLDNTVMRSNERIPTLTADQK
KQFGPFVNDYAVLYGYSQQVNQAIDSGLRPVVDSVNAIRVPQDYMTQRVALRDLNGSLGVLAQQLQNAKLQADAAHGALK
QSEDLKPVFDKAFNKVVTLPAEALQPMIPVAQTFTQQLVQVGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLATQ
HQEFIQAWTKVKSATE
>Mature_255_residues
STSDTHVSLCAFLGERSIKMATGKSCSRWFAPIAALLMVISLSGCFDKEGDQRKAFIDFLDNTVMRSNERIPTLTADQKK
QFGPFVNDYAVLYGYSQQVNQAIDSGLRPVVDSVNAIRVPQDYMTQRVALRDLNGSLGVLAQQLQNAKLQADAAHGALKQ
SEDLKPVFDKAFNKVVTLPAEALQPMIPVAQTFTQQLVQVGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLATQH
QEFIQAWTKVKSATE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082290, Length=236, Percent_Identity=86.4406779661017, Blast_Score=426, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021413 [H]

Pfam domain/function: PF11254 DUF3053 [H]

EC number: NA

Molecular weight: Translated: 28164; Mature: 28033

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STSDTHVSLCAFLGERSIKMATGKSCSRWFAPIAALLMVISLSGCFDKEGDQRKAFIDF
CCCCHHHHHHHHHCCCCEEHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LDNTVMRSNERIPTLTADQKKQFGPFVNDYAVLYGYSQQVNQAIDSGLRPVVDSVNAIRV
HHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCHHHHHCCHHEEC
PQDYMTQRVALRDLNGSLGVLAQQLQNAKLQADAAHGALKQSEDLKPVFDKAFNKVVTLP
CHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
AEALQPMIPVAQTFTQQLVQVGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLATQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
HQEFIQAWTKVKSATE
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]