| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is bisC [H]
Identifier: 218550832
GI number: 218550832
Start: 3629118
End: 3631397
Strand: Reverse
Name: bisC [H]
Synonym: EFER_3548
Alternate gene names: 218550832
Gene position: 3631397-3629118 (Counterclockwise)
Preceding gene: 218550839
Following gene: 218550829
Centisome position: 79.14
GC content: 54.43
Gene sequence:
>2280_bases ATGCTGGTTGAAACTGACGGCGAAACCGTGTTTAGCTCGCGTGGCGCGTTAGCCAGAGGAATGGATAACTCCTTGCAGAG CGCGGTTCGCGACCAGGTTCACAGCAATACGCGGGTACGATTTCCCATGGTGCGCAAAGGCTTTCTTGCGTCACCGGAAA ACCCGCAAGGCATTCGTGGGCAGGATGAATTTGTTCGCGTGAGTTGGGATGAGGCGCTGGATCTTATTCACCAACAACAT AAACGCATTCGTGAGGCTTATGGTCCGGCATCGATTTTTGCGGGTTCCTACGGCTGGCGTTCAAACGGCGTGCTGCATAA GGCCTCGACATTATTACAACGCTATATGGCGCTGGCGGGTGGATATACCGGGCATCTGGGGGATTATTCGACCGGCGCCG CACAGGCGATCATGCCGTATGTCGTGGGGGGCAGCGAAGTTTATCAACAGCAGACCAGTTGGCCGCTGGTGCTGGAACAT AGCGATGTCGTGGTGTTGTGGAGTGCTAACCCTCTCAATACGCTGAAAATTGCGTGGAATGCATCCGATGAGCAGGGGCT TTCTTACTTTTCCGCACTGCGTGACAGCGGGAAAAAGCTGATCTGCATTGATCCAATGCGATCGGAAACCGTCGATTTCT TTGGCGATAAAATGGAGTGGGTAGCACCGCATATGGGCACCGATGTTGCTCTGATGCTGGGGATCGCCCATACGCTGGTG GAAAATGGCTGGCACGACGAAGCGTTTCTGGCGCGTTGCACCACAGGTTATGACGTCTTCTCCTCTTATCTGCTGGGCGA GAGTGACGGAATAGCGAAAACTGCCGAATGGGCGGCAGAGATTTGTGGGGTTAACGCAGAGAAAATCCGCGAACTGGCGG CTATTTTCCAGCAAAATACCACCATGCTGATGGCTGGCTGGGGAATGCAGCGCCAACAGTTTGGTGAGCAAAAACACTGG ATGATCGTCACGCTGGCGGCAATGTTAGGTCAAATAGGTACGCCTGGCGGCGGCTTTGGTCTTTCTTACCATTTTGCCAA TGGTGGTAACCCCACGCGCCGCGCTGCGGTGCTTTCATCTATGCAGGGCAGCTTGCCAGGTGGCACCGATGCGGTAGATA AAATCCCCGTAGCCCGTATTGTTGAAGCACTGGAAAACCCTGGCGGCGCGTATCAACATAACGGCATGAACCGCCACTTC CCGGATATTCGTTTTATCTGGTGGGCGGGCGGCGCCAACTTTACTCATCATCAGGATACCAATCGCCTGATCCGTGCCTG GCAAAAACCGGAGCTGGTGGTGATCTCCGAGTGCTTCTGGACGGCAGCGGCGAAACACGCCGATATCGTTCTGCCTGCGA CCACTTCGTTTGAGCGTAATGATCTCACCATGACCGGCGATTACAGTAATCAGCATCTGGTGCCGATGAAGCAAGTGGTG CCACCACGTGATGAAGCGCGTAATGATTTTGATGTTTTTGCCGGGTTGAGTGAACGCTGGGAGAAGGGCGGCTTTGCGCG GTTTACGGAAGGGAAAAGTGAGCTGCAATGGCTTGAAACGTTTTATAACGTCGCCCGGCAACGTGGGGCAAGCCAGCAGG TTGAATTGCCGCCATTTGCTGAGTTCTGGGAAGCCAACCAGTTAATTGAGATGCCGGAACACCCGGACGGTGAGCGGTTT ATTCGCTTCGCTGATTTTCGCCGCGATCCGCAGGCACATCCATTAAAAACCGTCAGCGGTAAGATTGAAATCTTCTCGCA GCGTATTGCCGATTACGCTTATCCGGATTGCCCGGGGCATCCGATGTGGCTGGAGCCGGATGAGTGGCAGGGCAATGCCG AACCAGAACAGTTGCAGGTACTTTCTGCCCATCCGGCGCACCGCTTGCACAGTCAGTTGAATTACAGCTCTCTGCGCGAA TTATACGCGGTGGCAAACCGCGAACCCATTACCATACATCCTGAAGATGCTCTGGCGCGCGGCATAAAAGAGGGGGATAT AGTGCGGGTGTGGAACTCCCGTGGGCAGATCCTTGCCGGAGCGGTCATTAGCGAGGGAATTAAACCTGGCGTGATTTGCA TTCACGAAGGGGCATGGCCGGATCTGGATTTAACCGCTGACGGCATTTGTAAAAACGGCGCAGTGAATGTATTGACTAAA GACCTCCCCAGCTCGCGGCTGGGGAATGGTTGTGCAGGCAACACGGCTTTGGCGTGGCTGGAAAAATACAACGGTCCTGA ACTGCCACTTACGGCGTTTGATCCACCTGCCAGCTCATAA
Upstream 100 bases:
>100_bases TAATATTTAATTGCTCAATACATCTAACCTTTCAGGAGCCTTTGGTTTGGCCAACTCATCCTCACGATATTCCGTTCTGA CTGCCGCCCACTGGGGGCCC
Downstream 100 bases:
>100_bases TCCAGGTTGGGTGCTGGGTTTGTTCTTGCCATGCACTGTCAATAACACGGAAACCCTGCGCCATGTAGAAACGCAGTGCT TGCAGGTTTTCCTGGTAAAC
Product: biotin sulfoxide reductase
Products: Biotin. [C]
Alternate protein names: BDS reductase; BSO reductase [H]
Number of amino acids: Translated: 759; Mature: 759
Protein sequence:
>759_residues MLVETDGETVFSSRGALARGMDNSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDEFVRVSWDEALDLIHQQH KRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEH SDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLV ENGWHDEAFLARCTTGYDVFSSYLLGESDGIAKTAEWAAEICGVNAEKIRELAAIFQQNTTMLMAGWGMQRQQFGEQKHW MIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRAAVLSSMQGSLPGGTDAVDKIPVARIVEALENPGGAYQHNGMNRHF PDIRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVV PPRDEARNDFDVFAGLSERWEKGGFARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEFWEANQLIEMPEHPDGERF IRFADFRRDPQAHPLKTVSGKIEIFSQRIADYAYPDCPGHPMWLEPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRE LYAVANREPITIHPEDALARGIKEGDIVRVWNSRGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTK DLPSSRLGNGCAGNTALAWLEKYNGPELPLTAFDPPASS
Sequences:
>Translated_759_residues MLVETDGETVFSSRGALARGMDNSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDEFVRVSWDEALDLIHQQH KRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEH SDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLV ENGWHDEAFLARCTTGYDVFSSYLLGESDGIAKTAEWAAEICGVNAEKIRELAAIFQQNTTMLMAGWGMQRQQFGEQKHW MIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRAAVLSSMQGSLPGGTDAVDKIPVARIVEALENPGGAYQHNGMNRHF PDIRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVV PPRDEARNDFDVFAGLSERWEKGGFARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEFWEANQLIEMPEHPDGERF IRFADFRRDPQAHPLKTVSGKIEIFSQRIADYAYPDCPGHPMWLEPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRE LYAVANREPITIHPEDALARGIKEGDIVRVWNSRGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTK DLPSSRLGNGCAGNTALAWLEKYNGPELPLTAFDPPASS >Mature_759_residues MLVETDGETVFSSRGALARGMDNSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDEFVRVSWDEALDLIHQQH KRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEH SDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLV ENGWHDEAFLARCTTGYDVFSSYLLGESDGIAKTAEWAAEICGVNAEKIRELAAIFQQNTTMLMAGWGMQRQQFGEQKHW MIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRAAVLSSMQGSLPGGTDAVDKIPVARIVEALENPGGAYQHNGMNRHF PDIRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVV PPRDEARNDFDVFAGLSERWEKGGFARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEFWEANQLIEMPEHPDGERF IRFADFRRDPQAHPLKTVSGKIEIFSQRIADYAYPDCPGHPMWLEPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRE LYAVANREPITIHPEDALARGIKEGDIVRVWNSRGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTK DLPSSRLGNGCAGNTALAWLEKYNGPELPLTAFDPPASS
Specific function: This enzyme may serve as a scavenger, allowing the cell to utilize biotin sulfoxide as a biotin source. It reduces a spontaneous oxidation product of biotin, D-biotin D-sulfoxide (BSO or BDS), back to biotin [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI145693196, Length=759, Percent_Identity=96.0474308300395, Blast_Score=1521, Evalue=0.0, Organism=Escherichia coli, GI87081994, Length=763, Percent_Identity=64.089121887287, Blast_Score=1046, Evalue=0.0, Organism=Escherichia coli, GI1787231, Length=747, Percent_Identity=44.578313253012, Blast_Score=598, Evalue=1e-172, Organism=Escherichia coli, GI87081797, Length=757, Percent_Identity=32.6287978863937, Blast_Score=309, Evalue=5e-85, Organism=Escherichia coli, GI1787870, Length=753, Percent_Identity=30.6772908366534, Blast_Score=292, Evalue=5e-80, Organism=Escherichia coli, GI171474008, Length=754, Percent_Identity=30.5039787798408, Blast_Score=280, Evalue=3e-76, Organism=Escherichia coli, GI3868721, Length=473, Percent_Identity=23.6786469344609, Blast_Score=103, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 84057; Mature: 84057
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS00490 MOLYBDOPTERIN_PROK_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVETDGETVFSSRGALARGMDNSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRG CEEECCCCHHHHCCCCHHHCCCHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCCC QDEFVRVSWDEALDLIHQQHKRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAG CCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCHHHHHHHHHHHHHHHC GYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWN CCCCCCCCCCCCHHHHHHHHEECCHHHHHHCCCCCEEEECCCEEEEECCCCCCEEEEEEC ASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLV CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHH ENGWHDEAFLARCTTGYDVFSSYLLGESDGIAKTAEWAAEICGVNAEKIRELAAIFQQNT HCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCC TMLMAGWGMQRQQFGEQKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRAAVLSS EEEEECCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHH MQGSLPGGTDAVDKIPVARIVEALENPGGAYQHNGMNRHFPDIRFIWWAGGANFTHHQDT HCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHH NRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVV HHHHHHCCCCCEEEEEHHHHHHHCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCHHHCC PPRDEARNDFDVFAGLSERWEKGGFARFTEGKSELQWLETFYNVARQRGASQQVELPPFA CCHHHCCCCHHHHCCHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH EFWEANQLIEMPEHPDGERFIRFADFRRDPQAHPLKTVSGKIEIFSQRIADYAYPDCPGH HHHCCCCCCCCCCCCCHHHEEEHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCC PMWLEPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELYAVANREPITIHPEDALAR CCCCCCCCCCCCCCHHHEEEECCCCHHHHHHHCCHHHHHHHHHHHCCCCEEECCHHHHHC GIKEGDIVRVWNSRGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTK CCCCCCEEEEECCCCCEEEHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEC DLPSSRLGNGCAGNTALAWLEKYNGPELPLTAFDPPASS CCCHHHCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCC >Mature Secondary Structure MLVETDGETVFSSRGALARGMDNSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRG CEEECCCCHHHHCCCCHHHCCCHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCCC QDEFVRVSWDEALDLIHQQHKRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAG CCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCHHHHHHHHHHHHHHHC GYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWN CCCCCCCCCCCCHHHHHHHHEECCHHHHHHCCCCCEEEECCCEEEEECCCCCCEEEEEEC ASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLV CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHH ENGWHDEAFLARCTTGYDVFSSYLLGESDGIAKTAEWAAEICGVNAEKIRELAAIFQQNT HCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCC TMLMAGWGMQRQQFGEQKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRAAVLSS EEEEECCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHH MQGSLPGGTDAVDKIPVARIVEALENPGGAYQHNGMNRHFPDIRFIWWAGGANFTHHQDT HCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHH NRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVV HHHHHHCCCCCEEEEEHHHHHHHCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCHHHCC PPRDEARNDFDVFAGLSERWEKGGFARFTEGKSELQWLETFYNVARQRGASQQVELPPFA CCHHHCCCCHHHHCCHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH EFWEANQLIEMPEHPDGERFIRFADFRRDPQAHPLKTVSGKIEIFSQRIADYAYPDCPGH HHHCCCCCCCCCCCCCHHHEEEHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCC PMWLEPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELYAVANREPITIHPEDALAR CCCCCCCCCCCCCCHHHEEEECCCCHHHHHHHCCHHHHHHHHHHHCCCCEEECCHHHHHC GIKEGDIVRVWNSRGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTK CCCCCCEEEEECCCCCEEEHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEC DLPSSRLGNGCAGNTALAWLEKYNGPELPLTAFDPPASS CCCHHHCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds), [C]
Specific reaction: Reduces A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds), Back To Biotin. [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2180922; 8041620; 9278503 [H]