| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is malT [H]
Identifier: 218550676
GI number: 218550676
Start: 3448272
End: 3450977
Strand: Direct
Name: malT [H]
Synonym: EFER_3387
Alternate gene names: 218550676
Gene position: 3448272-3450977 (Clockwise)
Preceding gene: 218550673
Following gene: 218550679
Centisome position: 75.15
GC content: 51.4
Gene sequence:
>2706_bases ATGTTGATTCCGTCTAAACTCAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTC CGGCGCGAACAATTTCAGACTGGCACTCATTACCAGCCCGGCTGGCTATGGGAAAACGACGCTCGTTTCACAGTGGGCGG CGGGTAAAAGCGAACTCGGTTGGTTCTCTCTCGATGAAGGCGACAACCAACAAGAGCGGTTTGCCAGCTACCTGATTGCC GCAATCCAACAGGCCACCAACGGGCACTGCACTGCCAGTGAAGTGATGGCGCAAAAGCGGCAATACGCCAGTCTCTCCTC ACTCTTTGCCCAATTGTTTATCGAACTGGCAGAGTGGCATCAGCCGCTCTACCTGGTTATTGACGATTATCATCTGATCA CGAATCCGGTGATTCACGAATCCATGCGCTTCTTTTTACGCCATCAACCCGAGAATCTGACCCTGGTAGTGATGTCGCGT AATTTACCGCAATTAGGTATCGCCAATCTTCGTGTCCGCGATCAGTTGCTGGAAATTGGTAGCCAACAACTGGCTTTTAA TCACCAGGAAGCCAAGCAGTTTTTCGACCGTCGTCTGACATCACCTATCGAAGCTGCGGAAAGCAGCCGTATGTGTGACG ACGTCTCTGGCTGGGCCACGGCACTGCAACTTATCGCCCTTTCTGCCCGACAAAATAGCCATTCGGCGCATCAGTCAGCA AGGCGCCTCTCAGGTATTAATGCCAGCCATCTTTCGGATTATCTGGTGGATGAGGTGTTAAACAATGTCGATCTCGCCAC TCGTCATTTTCTGTTGAAAAGCGCCATTCTTCGTTCAATGAATGACGCTCTCATTACCCGCGTAACCGGGGAAGAAAATG GTCAAATGCGCCTTGAAGAGATCGAACGTCAGGGATTATTCCTGCAACGAATGGACGACTCTGGCGAATGGTTCAGTTAT CACCCGCTGTTCGGTAACTTTCTGCGCCAACGCTGTCAGTGGGAGCTGGCGGCAGAACTCCCTGAAATCCACCTCGCTGC TGCTGAAAGCTGGATGGCGCAAGGTTTTCCCAGCGAAGCTATTCACCATGCATTAGCGGCGGGCGATGCCAGCATGCTAC GCGATATTTTATTGAATCATGCCTGGGGATTATTTAATCACAGCGAACTGGCGCTTCTGGAAGAATCCCTGAAAGCACTT CCATGGGAAAGTCTACTGGAAAATCCCCGCCTGGTGCTGCTGCAAGCCTGGCTGATGCAAAGTCAGCATCGCTACAGTGA AGTCAATACGCTGTTGGCTCGTGCCGAGCAAGAGATCAAAGGCGAGATGACCGGCACACTGCATGCAGAGTTCAATGCCC TGCGTGCTCAGGTAGCGATTAACGCGGGTAATCCCGAAGAAGCAGAACGCCTGGCCAGGCTGGCACTGGATGAGCTGCCT ATCGCCTGGTTCTACAGTCGAATTGTTGCCACTTCTGTTCATGGCGAAGTGCTGCATTGTAAAGGTGATCTCTCCCGTTC GCTGGCACTGATGCAGCAAACTGAACAGATGGCGCGACACCATGACGTCTGGCATTACGCTCTCTGGAGTCTGATTCAGC AGAGCGAGATCTATTTTGCTCAGGGCTTTTTACAGGCAGCATGGGAAACTCAGGATAAAGCCTTTCAGTTGATCAAAGAA CAACATCTTGAGCAGCTACCGATGCATGAGTTTCTGGTACGTATTCGTGCGCAACTGCTTTGGGCATGGTCGCGGCTGGA CGAAGCTGAAGCATCTGCGCGCAGCGGTATAGAAGTGCTTTCATCTTTTCAGCCACAACAACAATTGCAATGTCTGGCAC TGTTGGTGCAATGTTCGCTGGCGCGAGGTGATCTCGACAATGCACGTACCTTATTGAATCGTCTGGAAAACCTGCTTGGC AATGGACAATATCATAGCGACTGGATCTCCAATGCTGATAAGGTCCGCGTGATTTACTGGCAGATGACGGGCGATAAAAA AGCCGCTGCAAACTGGCTGAGCCAAACGCCAAAACCGGAGTTTGCCAATAACCACTTCCTGCAAGGTCAGTGGCGCAATA TTGCCAGAGCGCAAATTCTGTTAGGGGAGTTTGAACCCGCGGAAATTGTGCTGGAAGAGTTGAATGAAAATGCACGTCAG CTACGTCTGATGAGCGATCTCAACCGTAATTTATTGTTACTCAACCAGTTGTATTGGCAGGCTGGTCGCAAAAATGATGC CCAGCGTGTACTTATGGAAGCACTACAACTGGCAAACCGCACCGGATTTATCAGCCATTTTGTCATCGAAGGCGAAGCGA TGGCACAACAACTGCGCCAGCTGATTCAGCTTAATACGCTGCCGGAACTGGAACAGCACCGCGCCCAGCGTATTCTGCGA GAAATCAATCAACATCATCGGCATAAATTCGCCCATTTCGATGAGAATTTCGTTGAACGTCTGCTAAATCATCCGGAAGT GCCAGAACTGATCCGTACCAGCCCGCTGACCCAACGCGAATGGCAGGTATTGGGGCTGATTTACTCCGGTTACAGCAATG AACAAATTGCAGGCGAGCTGGAAGTGGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTACCAGAAGCTCGGCGTG GCCCATCGCCAGGATGCGGTACAACACGCTCAGCAATTGCTGAAGATGATGGGGTACGGAGTGTAA
Upstream 100 bases:
>100_bases AGCTTGCAATGAGTCACTTTCTGACCGACCTTATATCTATTATTACGAAGCGCAAAAAAAATAAAAATTCTCTAAAATTC CCACAGTGAAGTGTTTAACT
Downstream 100 bases:
>100_bases GTTTAGCCGGATAACGCGTCGGATCCGGCTTGTATCCTTACATCATTTAATGCTAACCCGCGTTACGCCATCTGTTTCTA TCAAACAAAACCGCACCTGC
Product: transcriptional regulator MalT
Products: NA
Alternate protein names: ATP-dependent transcriptional activator malT [H]
Number of amino acids: Translated: 901; Mature: 901
Protein sequence:
>901_residues MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYGKTTLVSQWAAGKSELGWFSLDEGDNQQERFASYLIA AIQQATNGHCTASEVMAQKRQYASLSSLFAQLFIELAEWHQPLYLVIDDYHLITNPVIHESMRFFLRHQPENLTLVVMSR NLPQLGIANLRVRDQLLEIGSQQLAFNHQEAKQFFDRRLTSPIEAAESSRMCDDVSGWATALQLIALSARQNSHSAHQSA RRLSGINASHLSDYLVDEVLNNVDLATRHFLLKSAILRSMNDALITRVTGEENGQMRLEEIERQGLFLQRMDDSGEWFSY HPLFGNFLRQRCQWELAAELPEIHLAAAESWMAQGFPSEAIHHALAAGDASMLRDILLNHAWGLFNHSELALLEESLKAL PWESLLENPRLVLLQAWLMQSQHRYSEVNTLLARAEQEIKGEMTGTLHAEFNALRAQVAINAGNPEEAERLARLALDELP IAWFYSRIVATSVHGEVLHCKGDLSRSLALMQQTEQMARHHDVWHYALWSLIQQSEIYFAQGFLQAAWETQDKAFQLIKE QHLEQLPMHEFLVRIRAQLLWAWSRLDEAEASARSGIEVLSSFQPQQQLQCLALLVQCSLARGDLDNARTLLNRLENLLG NGQYHSDWISNADKVRVIYWQMTGDKKAAANWLSQTPKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARQ LRLMSDLNRNLLLLNQLYWQAGRKNDAQRVLMEALQLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRILR EINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQREWQVLGLIYSGYSNEQIAGELEVAATTIKTHIRNLYQKLGV AHRQDAVQHAQQLLKMMGYGV
Sequences:
>Translated_901_residues MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYGKTTLVSQWAAGKSELGWFSLDEGDNQQERFASYLIA AIQQATNGHCTASEVMAQKRQYASLSSLFAQLFIELAEWHQPLYLVIDDYHLITNPVIHESMRFFLRHQPENLTLVVMSR NLPQLGIANLRVRDQLLEIGSQQLAFNHQEAKQFFDRRLTSPIEAAESSRMCDDVSGWATALQLIALSARQNSHSAHQSA RRLSGINASHLSDYLVDEVLNNVDLATRHFLLKSAILRSMNDALITRVTGEENGQMRLEEIERQGLFLQRMDDSGEWFSY HPLFGNFLRQRCQWELAAELPEIHLAAAESWMAQGFPSEAIHHALAAGDASMLRDILLNHAWGLFNHSELALLEESLKAL PWESLLENPRLVLLQAWLMQSQHRYSEVNTLLARAEQEIKGEMTGTLHAEFNALRAQVAINAGNPEEAERLARLALDELP IAWFYSRIVATSVHGEVLHCKGDLSRSLALMQQTEQMARHHDVWHYALWSLIQQSEIYFAQGFLQAAWETQDKAFQLIKE QHLEQLPMHEFLVRIRAQLLWAWSRLDEAEASARSGIEVLSSFQPQQQLQCLALLVQCSLARGDLDNARTLLNRLENLLG NGQYHSDWISNADKVRVIYWQMTGDKKAAANWLSQTPKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARQ LRLMSDLNRNLLLLNQLYWQAGRKNDAQRVLMEALQLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRILR EINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQREWQVLGLIYSGYSNEQIAGELEVAATTIKTHIRNLYQKLGV AHRQDAVQHAQQLLKMMGYGV >Mature_901_residues MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYGKTTLVSQWAAGKSELGWFSLDEGDNQQERFASYLIA AIQQATNGHCTASEVMAQKRQYASLSSLFAQLFIELAEWHQPLYLVIDDYHLITNPVIHESMRFFLRHQPENLTLVVMSR NLPQLGIANLRVRDQLLEIGSQQLAFNHQEAKQFFDRRLTSPIEAAESSRMCDDVSGWATALQLIALSARQNSHSAHQSA RRLSGINASHLSDYLVDEVLNNVDLATRHFLLKSAILRSMNDALITRVTGEENGQMRLEEIERQGLFLQRMDDSGEWFSY HPLFGNFLRQRCQWELAAELPEIHLAAAESWMAQGFPSEAIHHALAAGDASMLRDILLNHAWGLFNHSELALLEESLKAL PWESLLENPRLVLLQAWLMQSQHRYSEVNTLLARAEQEIKGEMTGTLHAEFNALRAQVAINAGNPEEAERLARLALDELP IAWFYSRIVATSVHGEVLHCKGDLSRSLALMQQTEQMARHHDVWHYALWSLIQQSEIYFAQGFLQAAWETQDKAFQLIKE QHLEQLPMHEFLVRIRAQLLWAWSRLDEAEASARSGIEVLSSFQPQQQLQCLALLVQCSLARGDLDNARTLLNRLENLLG NGQYHSDWISNADKVRVIYWQMTGDKKAAANWLSQTPKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARQ LRLMSDLNRNLLLLNQLYWQAGRKNDAQRVLMEALQLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRILR EINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQREWQVLGLIYSGYSNEQIAGELEVAATTIKTHIRNLYQKLGV AHRQDAVQHAQQLLKMMGYGV
Specific function: Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box):5'-GGA[TG]GA-3' [H]
COG id: COG2909
COG function: function code K; ATP-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI2367223, Length=901, Percent_Identity=92.3418423973363, Blast_Score=1669, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016032 - InterPro: IPR011990 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE [H]
EC number: NA
Molecular weight: Translated: 103064; Mature: 103064
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYGKTTLVSQWAAGKSELG CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCC WFSLDEGDNQQERFASYLIAAIQQATNGHCTASEVMAQKRQYASLSSLFAQLFIELAEWH CEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QPLYLVIDDYHLITNPVIHESMRFFLRHQPENLTLVVMSRNLPQLGIANLRVRDQLLEIG CCEEEEEECCHHHCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCC SQQLAFNHQEAKQFFDRRLTSPIEAAESSRMCDDVSGWATALQLIALSARQNSHSAHQSA CHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RRLSGINASHLSDYLVDEVLNNVDLATRHFLLKSAILRSMNDALITRVTGEENGQMRLEE HHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHH IERQGLFLQRMDDSGEWFSYHPLFGNFLRQRCQWELAAELPEIHLAAAESWMAQGFPSEA HHHCCCEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH IHHALAAGDASMLRDILLNHAWGLFNHSELALLEESLKALPWESLLENPRLVLLQAWLMQ HHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHH SQHRYSEVNTLLARAEQEIKGEMTGTLHAEFNALRAQVAINAGNPEEAERLARLALDELP HHHHHHHHHHHHHHHHHHHCCHHCEEHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHCC IAWFYSRIVATSVHGEVLHCKGDLSRSLALMQQTEQMARHHDVWHYALWSLIQQSEIYFA HHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGFLQAAWETQDKAFQLIKEQHLEQLPMHEFLVRIRAQLLWAWSRLDEAEASARSGIEVL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSFQPQQQLQCLALLVQCSLARGDLDNARTLLNRLENLLGNGQYHSDWISNADKVRVIYW HCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEE QMTGDKKAAANWLSQTPKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARQ EECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHH LRLMSDLNRNLLLLNQLYWQAGRKNDAQRVLMEALQLANRTGFISHFVIEGEAMAQQLRQ HHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHEECCHHHHHHHHH LIQLNTLPELEQHRAQRILREINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQRE HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHCCCCCHHH WQVLGLIYSGYSNEQIAGELEVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQLLKMMGYG HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC V C >Mature Secondary Structure MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYGKTTLVSQWAAGKSELG CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCC WFSLDEGDNQQERFASYLIAAIQQATNGHCTASEVMAQKRQYASLSSLFAQLFIELAEWH CEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QPLYLVIDDYHLITNPVIHESMRFFLRHQPENLTLVVMSRNLPQLGIANLRVRDQLLEIG CCEEEEEECCHHHCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCC SQQLAFNHQEAKQFFDRRLTSPIEAAESSRMCDDVSGWATALQLIALSARQNSHSAHQSA CHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RRLSGINASHLSDYLVDEVLNNVDLATRHFLLKSAILRSMNDALITRVTGEENGQMRLEE HHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHH IERQGLFLQRMDDSGEWFSYHPLFGNFLRQRCQWELAAELPEIHLAAAESWMAQGFPSEA HHHCCCEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH IHHALAAGDASMLRDILLNHAWGLFNHSELALLEESLKALPWESLLENPRLVLLQAWLMQ HHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHH SQHRYSEVNTLLARAEQEIKGEMTGTLHAEFNALRAQVAINAGNPEEAERLARLALDELP HHHHHHHHHHHHHHHHHHHCCHHCEEHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHCC IAWFYSRIVATSVHGEVLHCKGDLSRSLALMQQTEQMARHHDVWHYALWSLIQQSEIYFA HHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGFLQAAWETQDKAFQLIKEQHLEQLPMHEFLVRIRAQLLWAWSRLDEAEASARSGIEVL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSFQPQQQLQCLALLVQCSLARGDLDNARTLLNRLENLLGNGQYHSDWISNADKVRVIYW HCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEE QMTGDKKAAANWLSQTPKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARQ EECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHH LRLMSDLNRNLLLLNQLYWQAGRKNDAQRVLMEALQLANRTGFISHFVIEGEAMAQQLRQ HHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHEECCHHHHHHHHH LIQLNTLPELEQHRAQRILREINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQRE HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHCCCCCHHH WQVLGLIYSGYSNEQIAGELEVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQLLKMMGYG HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA