Click here to switch to the map view.

The map label for this gene is 218550440

Identifier: 218550440

GI number: 218550440

Start: 3221159

End: 3221377

Strand: Direct

Name: 218550440

Synonym: EFER_3134

Alternate gene names: NA

Gene position: 3221159-3221377 (Clockwise)

Preceding gene: 218550439

Following gene: 218550441

Centisome position: 70.2

GC content: 42.01

Gene sequence:

>219_bases
ATGTCTGAAGTTAAATCAAAAGTACCTGGCGTTGTTGATGAAGTTAAATCAGCTGCAGGAGATAAAATCGAAAAAGGTCA
GGTGGTGTTGGTACTGGAAGCTATGAAAATGAAAATGCCGGTGGCATCTCCAGAAAGTGGAGTGTTAAAGGCTATTCATG
TAAATCCCGGCGACCGAGTAAACCCTGGAGTGGTATTATTCGAAATCGCAGCAGAATAA

Upstream 100 bases:

>100_bases
TGTTGGCTAAAGGCGAAAATGACGTTCAATTAATTACCCGTCAAGACGTCATTAAATTATCAAAAACATCTTTCAATTAA
ATATATTAAAGGAAACTAAT

Downstream 100 bases:

>100_bases
GATGTTTTAATACTAAACGACATTCTTATGTGATGTTATTGCTATGCTTACATATCAGCGAACTAATAATTCGGTTCGCT
GATATGCCAGGAGTCTATCC

Product: Biotin protein MadF

Products: NA

Alternate protein names: Biotin/Lipoyl Attachment Domain-Containing Protein

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MSEVKSKVPGVVDEVKSAAGDKIEKGQVVLVLEAMKMKMPVASPESGVLKAIHVNPGDRVNPGVVLFEIAAE

Sequences:

>Translated_72_residues
MSEVKSKVPGVVDEVKSAAGDKIEKGQVVLVLEAMKMKMPVASPESGVLKAIHVNPGDRVNPGVVLFEIAAE
>Mature_71_residues
SEVKSKVPGVVDEVKSAAGDKIEKGQVVLVLEAMKMKMPVASPESGVLKAIHVNPGDRVNPGVVLFEIAAE

Specific function: Unknown

COG id: COG0511

COG function: function code I; Biotin carboxyl carrier protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7555; Mature: 7424

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVKSKVPGVVDEVKSAAGDKIEKGQVVLVLEAMKMKMPVASPESGVLKAIHVNPGDRV
CCCCCHHCCCHHHHHHHHCCCCCCCCCEEEEEEEHHHCCCCCCCCCCCEEEEEECCCCCC
NPGVVLFEIAAE
CCCEEEEEEECC
>Mature Secondary Structure 
SEVKSKVPGVVDEVKSAAGDKIEKGQVVLVLEAMKMKMPVASPESGVLKAIHVNPGDRV
CCCCHHCCCHHHHHHHHCCCCCCCCCEEEEEEEHHHCCCCCCCCCCCEEEEEECCCCCC
NPGVVLFEIAAE
CCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA