| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218550439
Identifier: 218550439
GI number: 218550439
Start: 3220452
End: 3221138
Strand: Direct
Name: 218550439
Synonym: EFER_3133
Alternate gene names: NA
Gene position: 3220452-3221138 (Clockwise)
Preceding gene: 218550438
Following gene: 218550440
Centisome position: 70.18
GC content: 47.6
Gene sequence:
>687_bases ATGAGCACGCTCAAACGCCATACTCTTTGCTGGGTAGCACAAACGGCACTGAGTGATATCGCAAAACAGTTTGAGCTGAT GTTTTGCTCGCTTCCCGCTGACATTCGTCACCAGGCGCTGGCGACTCTTCTCAGCGGGGCATTACCCGGTATCGTACGAC GTGGCGCACACACCACGGAGGAAGTTCCTCTTGGCTTTAGTTTCCCGTTGCGTTGGCTAGGGCAACGTCTGCGTCTGGCG GTAAACGTTCCCGTCAGGGCCATTGTTCGCAACTCAACTCCCGAGCAAACAGCTCGTCTGCCTTTGAGCAACCGTACAAC AGCGACACGTGCGTTTAACAGGTTGCGAGAGAGTGGTTGTTGGCAAGAATTACGAATGGGTGTCTGGGGGTCAGTAGCTT TAGAGATGGTAACGCCATGGCAATGGACGGATAACCATTCGGATCTGGATATCCAGATTATGCCCGAATCATTGAGTTCT ATTGCGCAATGCTTAGAGACGCTACGAAATATAGAGCATCATTATCAGTTACGTATTGATGGCGAAATTCTTCTCTCAAA TGGATACGCCATAAATATTAAAGAATGGTTCAGCGGAAGTCTTACTCTGTTGGCTAAAGGCGAAAATGACGTTCAATTAA TTACCCGTCAAGACGTCATTAAATTATCAAAAACATCTTTCAATTAA
Upstream 100 bases:
>100_bases TTATCGGCCCCGATGCCACAGCACAATTTGACGCTCTGCTGGCATCACAGCGAGAGTTACAACAACAAGGGAAAAATGAC CCCGCCTGGAGTAAGGCGCG
Downstream 100 bases:
>100_bases ATATATTAAAGGAAACTAATATGTCTGAAGTTAAATCAAAAGTACCTGGCGTTGTTGATGAAGTTAAATCAGCTGCAGGA GATAAAATCGAAAAAGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSTLKRHTLCWVAQTALSDIAKQFELMFCSLPADIRHQALATLLSGALPGIVRRGAHTTEEVPLGFSFPLRWLGQRLRLA VNVPVRAIVRNSTPEQTARLPLSNRTTATRAFNRLRESGCWQELRMGVWGSVALEMVTPWQWTDNHSDLDIQIMPESLSS IAQCLETLRNIEHHYQLRIDGEILLSNGYAINIKEWFSGSLTLLAKGENDVQLITRQDVIKLSKTSFN
Sequences:
>Translated_228_residues MSTLKRHTLCWVAQTALSDIAKQFELMFCSLPADIRHQALATLLSGALPGIVRRGAHTTEEVPLGFSFPLRWLGQRLRLA VNVPVRAIVRNSTPEQTARLPLSNRTTATRAFNRLRESGCWQELRMGVWGSVALEMVTPWQWTDNHSDLDIQIMPESLSS IAQCLETLRNIEHHYQLRIDGEILLSNGYAINIKEWFSGSLTLLAKGENDVQLITRQDVIKLSKTSFN >Mature_227_residues STLKRHTLCWVAQTALSDIAKQFELMFCSLPADIRHQALATLLSGALPGIVRRGAHTTEEVPLGFSFPLRWLGQRLRLAV NVPVRAIVRNSTPEQTARLPLSNRTTATRAFNRLRESGCWQELRMGVWGSVALEMVTPWQWTDNHSDLDIQIMPESLSSI AQCLETLRNIEHHYQLRIDGEILLSNGYAINIKEWFSGSLTLLAKGENDVQLITRQDVIKLSKTSFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25763; Mature: 25632
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLKRHTLCWVAQTALSDIAKQFELMFCSLPADIRHQALATLLSGALPGIVRRGAHTTE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCC EVPLGFSFPLRWLGQRLRLAVNVPVRAIVRNSTPEQTARLPLSNRTTATRAFNRLRESGC CCCCCCCCCHHHHHHHHEEEECCCEEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHCCC WQELRMGVWGSVALEMVTPWQWTDNHSDLDIQIMPESLSSIAQCLETLRNIEHHYQLRID HHHHHHCCCHHHHHEEECCCEECCCCCCEEEEECCHHHHHHHHHHHHHHCHHHEEEEEEC GEILLSNGYAINIKEWFSGSLTLLAKGENDVQLITRQDVIKLSKTSFN CEEEEECCEEEEEHHHCCCCEEEEEECCCCEEEEEHHHHHHHHCCCCC >Mature Secondary Structure STLKRHTLCWVAQTALSDIAKQFELMFCSLPADIRHQALATLLSGALPGIVRRGAHTTE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCC EVPLGFSFPLRWLGQRLRLAVNVPVRAIVRNSTPEQTARLPLSNRTTATRAFNRLRESGC CCCCCCCCCHHHHHHHHEEEECCCEEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHCCC WQELRMGVWGSVALEMVTPWQWTDNHSDLDIQIMPESLSSIAQCLETLRNIEHHYQLRID HHHHHHCCCHHHHHEEECCCEECCCCCCEEEEECCHHHHHHHHHHHHHHCHHHEEEEEEC GEILLSNGYAINIKEWFSGSLTLLAKGENDVQLITRQDVIKLSKTSFN CEEEEECCEEEEEHHHCCCCEEEEEECCCCEEEEEHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA