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The map label for this gene is oadB [H]

Identifier: 218550433

GI number: 218550433

Start: 3214304

End: 3215512

Strand: Direct

Name: oadB [H]

Synonym: EFER_3127

Alternate gene names: 218550433

Gene position: 3214304-3215512 (Clockwise)

Preceding gene: 218550432

Following gene: 218550434

Centisome position: 70.05

GC content: 48.88

Gene sequence:

>1209_bases
ATGGATATTTTCGTTAAGCTTTTTTCGGGGATCGGCACATTTTTTGTTGAAGATCCTAAAATAGCAATCGCTCGTTTATT
ATTAATAATTCTTGGATTCATTCTGGCATGGATGGGATTTCGCCGGAAACTTGAACCTTTAATTATGGTGCCAATGGGAT
TAGGCATGATCGCTGTTAATGCTGGTGTTCTGTTTCTTGCTGGCGGGCAAACTGGCACTTTAATCCTTGATCCGATGGTG
AGTGATCCCACGGAGCTGGTTAATCTGATGCAGATAAACTTTCTGCAACCGGTTTATAACTTTACATTCAGTAACGGCCT
CATTGCCTGTATCGTTTTCTTTGGCATTGGTGCCATGAGTGATATCAGCTTCATTCTGCTACGCCCCTGGGCAAGCATCA
TTGTTGCTCTGTTCGCCGAAGCAGGAACATTTGCCGCACTGTTACTCGGGATCGAGGTCTTTGGCTTACCCGCCAATGAA
GCGGCGTCAATTGCCACCATTGGCGGTGCGGATGGCCCCATGGTGCTGTTTGCCTCGCTGATCCTCGCGCCAAATCTTTT
TGTACCAATTGCCATTATTGCCTACCTCTACCTGAGTTTGACCTACGCTGGCTATCCGTATCTGGTGCGTCTGATGGTGC
CGAAAAAGTATCGTGGCATGGAAGTGGATATCGACTATCCGACGGTTTCAAAAAAGGCAAAGTTCATCTTTACCATCTGT
GCCTGCTTGTTGTTATGCCTGCTATTACCTGTTGCCGCGCCGCTGATCCTCTCTTTCTTCCTCGGTATTGCGATTAAAGA
AGCTGAGATCGAGCCGTTCCAGAAACTGCTGGAATCGACAATGACCTATACCGCGACACTGTTTCTTGGGCTGCTGCTCG
GTACGCTATGCGAAGCACAGACCATTCTCGATCCTAAAGTTGGCATCATCCTGATCCTCGGTATTGGCGCCCTTGCTATA
TCTGCAGTCGGCGCGCTACTTGGCGGCTGGTTTATCTGGTTTATCTCCAAAGGTCGCTATAACCCTGCCATTGGTATTGC
TGGCGTCTCTTGCCTGCCAACCACAGCCAAAATCGCGCAGAAAGAAGTAAGCCACGAAAACCCCTATGCCGTCATTCTTC
CCCTCGCGATGGGAGCGGGTGTCAGCGGGTTGATCGTCTCGGCTATCGCCACGGGGATCTTTATCTCCACGTTATTCCTG
CTGAAATAA

Upstream 100 bases:

>100_bases
GTGGGCATTATTGTTGGGGTAAATAAGCTAATGAATAAGTTAAATATTACCGACGACTAATAAACAAATCGCCTTTCTAG
CAACACCAGGGATTCATTCT

Downstream 100 bases:

>100_bases
GGGAGTTATGACATGCTAAAAGAGCACAACTGGCATCAACTCAAAGACGATACGGAGCAGCGGTTGCAGCTAATAAAGCC
GTATCTTCGTGAGGGTAAAA

Product: carboxybiotin decarboxylase subunit of malonate decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MDIFVKLFSGIGTFFVEDPKIAIARLLLIILGFILAWMGFRRKLEPLIMVPMGLGMIAVNAGVLFLAGGQTGTLILDPMV
SDPTELVNLMQINFLQPVYNFTFSNGLIACIVFFGIGAMSDISFILLRPWASIIVALFAEAGTFAALLLGIEVFGLPANE
AASIATIGGADGPMVLFASLILAPNLFVPIAIIAYLYLSLTYAGYPYLVRLMVPKKYRGMEVDIDYPTVSKKAKFIFTIC
ACLLLCLLLPVAAPLILSFFLGIAIKEAEIEPFQKLLESTMTYTATLFLGLLLGTLCEAQTILDPKVGIILILGIGALAI
SAVGALLGGWFIWFISKGRYNPAIGIAGVSCLPTTAKIAQKEVSHENPYAVILPLAMGAGVSGLIVSAIATGIFISTLFL
LK

Sequences:

>Translated_402_residues
MDIFVKLFSGIGTFFVEDPKIAIARLLLIILGFILAWMGFRRKLEPLIMVPMGLGMIAVNAGVLFLAGGQTGTLILDPMV
SDPTELVNLMQINFLQPVYNFTFSNGLIACIVFFGIGAMSDISFILLRPWASIIVALFAEAGTFAALLLGIEVFGLPANE
AASIATIGGADGPMVLFASLILAPNLFVPIAIIAYLYLSLTYAGYPYLVRLMVPKKYRGMEVDIDYPTVSKKAKFIFTIC
ACLLLCLLLPVAAPLILSFFLGIAIKEAEIEPFQKLLESTMTYTATLFLGLLLGTLCEAQTILDPKVGIILILGIGALAI
SAVGALLGGWFIWFISKGRYNPAIGIAGVSCLPTTAKIAQKEVSHENPYAVILPLAMGAGVSGLIVSAIATGIFISTLFL
LK
>Mature_402_residues
MDIFVKLFSGIGTFFVEDPKIAIARLLLIILGFILAWMGFRRKLEPLIMVPMGLGMIAVNAGVLFLAGGQTGTLILDPMV
SDPTELVNLMQINFLQPVYNFTFSNGLIACIVFFGIGAMSDISFILLRPWASIIVALFAEAGTFAALLLGIEVFGLPANE
AASIATIGGADGPMVLFASLILAPNLFVPIAIIAYLYLSLTYAGYPYLVRLMVPKKYRGMEVDIDYPTVSKKAKFIFTIC
ACLLLCLLLPVAAPLILSFFLGIAIKEAEIEPFQKLLESTMTYTATLFLGLLLGTLCEAQTILDPKVGIILILGIGALAI
SAVGALLGGWFIWFISKGRYNPAIGIAGVSCLPTTAKIAQKEVSHENPYAVILPLAMGAGVSGLIVSAIATGIFISTLFL
LK

Specific function: Lyase and sodium transporter [H]

COG id: COG1883

COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcdB/mmdB/oadB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005661 [H]

Pfam domain/function: PF03977 OAD_beta [H]

EC number: =4.1.1.3 [H]

Molecular weight: Translated: 42958; Mature: 42958

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIFVKLFSGIGTFFVEDPKIAIARLLLIILGFILAWMGFRRKLEPLIMVPMGLGMIAVN
CHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEC
AGVLFLAGGQTGTLILDPMVSDPTELVNLMQINFLQPVYNFTFSNGLIACIVFFGIGAMS
CCEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHH
DISFILLRPWASIIVALFAEAGTFAALLLGIEVFGLPANEAASIATIGGADGPMVLFASL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHH
ILAPNLFVPIAIIAYLYLSLTYAGYPYLVRLMVPKKYRGMEVDIDYPTVSKKAKFIFTIC
HHCCCHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHH
ACLLLCLLLPVAAPLILSFFLGIAIKEAEIEPFQKLLESTMTYTATLFLGLLLGTLCEAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TILDPKVGIILILGIGALAISAVGALLGGWFIWFISKGRYNPAIGIAGVSCLPTTAKIAQ
HHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEECCCCCCCCHHHHHH
KEVSHENPYAVILPLAMGAGVSGLIVSAIATGIFISTLFLLK
HHHCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDIFVKLFSGIGTFFVEDPKIAIARLLLIILGFILAWMGFRRKLEPLIMVPMGLGMIAVN
CHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEC
AGVLFLAGGQTGTLILDPMVSDPTELVNLMQINFLQPVYNFTFSNGLIACIVFFGIGAMS
CCEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHH
DISFILLRPWASIIVALFAEAGTFAALLLGIEVFGLPANEAASIATIGGADGPMVLFASL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHH
ILAPNLFVPIAIIAYLYLSLTYAGYPYLVRLMVPKKYRGMEVDIDYPTVSKKAKFIFTIC
HHCCCHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHH
ACLLLCLLLPVAAPLILSFFLGIAIKEAEIEPFQKLLESTMTYTATLFLGLLLGTLCEAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TILDPKVGIILILGIGALAISAVGALLGGWFIWFISKGRYNPAIGIAGVSCLPTTAKIAQ
HHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEECCCCCCCCHHHHHH
KEVSHENPYAVILPLAMGAGVSGLIVSAIATGIFISTLFLLK
HHHCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA