| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218550434
Identifier: 218550434
GI number: 218550434
Start: 3215525
End: 3217192
Strand: Direct
Name: 218550434
Synonym: EFER_3128
Alternate gene names: NA
Gene position: 3215525-3217192 (Clockwise)
Preceding gene: 218550433
Following gene: 218550435
Centisome position: 70.07
GC content: 51.56
Gene sequence:
>1668_bases ATGCTAAAAGAGCACAACTGGCATCAACTCAAAGACGATACGGAGCAGCGGTTGCAGCTAATAAAGCCGTATCTTCGTGA GGGTAAAATTATCGCCGCCAGCGATACCGTTGCCGTAATGGAAGCGATCCTGCGTAGCGGTGACCGGGTAAATATTGAAG GGAATAACCAGAAACAGGCGGATTTTTTAGCGGAATGCTTGTGCAAAGTTGATCCCCAAAAAATCTCCGGTCTGCATATG GTGCAGTCCTCTGTACCCCTTTCGACACACCTTGATCTGTTTGAAAAAGGTATCGCAGAAAAGCTCGATTTTGCCTATGC CGGACCACAAGATGGTCGTCTGGCTAAGCTCATTCAACAGGGCAAAATTAAGCTCGGCGCGATTCATACCTATCTGGAAC TGTTCAGCCGCTATTTTGTTGATCTCACTCCTCGCGTGTCGTTCATCACTGCGTTTGAGGCAGATAAAGACGGTAATTTG TATACCGGTTTTAACACGGAAGATACGCCAGTCATCGCCGAGGCAACTCACTTCCGTCAGGGGATCGTCATTGCTCAGGT CAACAAGATTGTCGACAAAGTACCGCGCGTCGATATCCCTGGTGACTGGGTTAATGCCGTGATTGAAGCACCACGCCCTT TCTATGTTGAACCGTTATTCACCCGCGATCCCGCGTTGATCACCGATACCCATGTGTTAATGGCAATGATGGCCCTGAAA GGGATTTATGCCGAGTACGGCGTTGAACGTATCAACCACGGGATCGGTTTTTTCACTGCCGCCATCGAGCTGCTGCTGCC AACTTACGGCGAAGAACTGGGTCTGAAGGGCAAAGTCTGTACCCATATGGTACTCAACCCGCATCCAACCTTAATTCCGG CAATTGAAAGCGGCTGGATTCAGTCTGTGCATTGTTTCGGTGGCGAGTTGGGAATGGAGAAATATGTCGCTGAACGCCCG GATGTGTTCTACATCGGACAGGATGGCACTTTGCGTTCTAACCGCGCCTTCGCCCAGGCTGCCGGACACTATGCGCTGGA TATGTTTATCGGCGGCACTCTGCAACTGGATAAATATGGCAACAGCAGTACAGCTACAGCCAGCCGGGTCTCCGGTTTTG GTGGCGCACCAAATATGGGCTGTGATGCTAAAGGTCGCCGTCACACAACCCGTTCATGGCTGAAATGTGGCGAGGAGTTT AATGCCACTCAACAGCAACTCATTGGTGATATGCCACGTGGCAAGCGTCTGGTTGTGCAGATGCAAGAAACCTTCCGCGA GAAACGCCAGCCTGCCTTTGTTGACAAACTCGATGCCTGGCAGCTTGCCGAAAAAGCCGGTCTCGATCTGCCGCCAGTGA TGGTTTACGCCGATGACGTCACCCATGTGTTGACCGAAGAAGGTATCGCTTATCTCCATCGTTGTGACGGACTGGAACAG CGGATGGCCGCTATTCGTGCCGTCGCAGGTTATACCGATATTGGTCTGGCAGCCGATCCTGCACAAACCCAGGCATTGCG TGAAAGCGGTATCGTTAAAACACCAGAAGATTTGGGTATTGATCGCCGCCGTGCCACTCGCCAGCTGCTGGCAGCCAAAA GTATCCGCGATTTAGTCGAATGGTCTGGCGGACTCTATAACCCGCCTGCTCGTTTCCGTAACTGGTAA
Upstream 100 bases:
>100_bases CCTCGCGATGGGAGCGGGTGTCAGCGGGTTGATCGTCTCGGCTATCGCCACGGGGATCTTTATCTCCACGTTATTCCTGC TGAAATAAGGGAGTTATGAC
Downstream 100 bases:
>100_bases GGGGAAAAGACATGGCTTTACATCAAATATCACACCACTTTAGCGGTAACGGTAAACGTGCTGCGCTACCACAAACCGTA CATTGCGGCATCGTTGGTTC
Product: Acetyl-S-acyl carrier protein: malonate acyl carrier protein-SH transferase
Products: NA
Alternate protein names: Alpha Subunit Of Malonate Decarboxylase; Malonate Decarboxylase Subunit Alpha; Malonate Decarboxylase Alpha-Subunit; Subunit Alpha Of Malonate Decarboxylase
Number of amino acids: Translated: 555; Mature: 555
Protein sequence:
>555_residues MLKEHNWHQLKDDTEQRLQLIKPYLREGKIIAASDTVAVMEAILRSGDRVNIEGNNQKQADFLAECLCKVDPQKISGLHM VQSSVPLSTHLDLFEKGIAEKLDFAYAGPQDGRLAKLIQQGKIKLGAIHTYLELFSRYFVDLTPRVSFITAFEADKDGNL YTGFNTEDTPVIAEATHFRQGIVIAQVNKIVDKVPRVDIPGDWVNAVIEAPRPFYVEPLFTRDPALITDTHVLMAMMALK GIYAEYGVERINHGIGFFTAAIELLLPTYGEELGLKGKVCTHMVLNPHPTLIPAIESGWIQSVHCFGGELGMEKYVAERP DVFYIGQDGTLRSNRAFAQAAGHYALDMFIGGTLQLDKYGNSSTATASRVSGFGGAPNMGCDAKGRRHTTRSWLKCGEEF NATQQQLIGDMPRGKRLVVQMQETFREKRQPAFVDKLDAWQLAEKAGLDLPPVMVYADDVTHVLTEEGIAYLHRCDGLEQ RMAAIRAVAGYTDIGLAADPAQTQALRESGIVKTPEDLGIDRRRATRQLLAAKSIRDLVEWSGGLYNPPARFRNW
Sequences:
>Translated_555_residues MLKEHNWHQLKDDTEQRLQLIKPYLREGKIIAASDTVAVMEAILRSGDRVNIEGNNQKQADFLAECLCKVDPQKISGLHM VQSSVPLSTHLDLFEKGIAEKLDFAYAGPQDGRLAKLIQQGKIKLGAIHTYLELFSRYFVDLTPRVSFITAFEADKDGNL YTGFNTEDTPVIAEATHFRQGIVIAQVNKIVDKVPRVDIPGDWVNAVIEAPRPFYVEPLFTRDPALITDTHVLMAMMALK GIYAEYGVERINHGIGFFTAAIELLLPTYGEELGLKGKVCTHMVLNPHPTLIPAIESGWIQSVHCFGGELGMEKYVAERP DVFYIGQDGTLRSNRAFAQAAGHYALDMFIGGTLQLDKYGNSSTATASRVSGFGGAPNMGCDAKGRRHTTRSWLKCGEEF NATQQQLIGDMPRGKRLVVQMQETFREKRQPAFVDKLDAWQLAEKAGLDLPPVMVYADDVTHVLTEEGIAYLHRCDGLEQ RMAAIRAVAGYTDIGLAADPAQTQALRESGIVKTPEDLGIDRRRATRQLLAAKSIRDLVEWSGGLYNPPARFRNW >Mature_555_residues MLKEHNWHQLKDDTEQRLQLIKPYLREGKIIAASDTVAVMEAILRSGDRVNIEGNNQKQADFLAECLCKVDPQKISGLHM VQSSVPLSTHLDLFEKGIAEKLDFAYAGPQDGRLAKLIQQGKIKLGAIHTYLELFSRYFVDLTPRVSFITAFEADKDGNL YTGFNTEDTPVIAEATHFRQGIVIAQVNKIVDKVPRVDIPGDWVNAVIEAPRPFYVEPLFTRDPALITDTHVLMAMMALK GIYAEYGVERINHGIGFFTAAIELLLPTYGEELGLKGKVCTHMVLNPHPTLIPAIESGWIQSVHCFGGELGMEKYVAERP DVFYIGQDGTLRSNRAFAQAAGHYALDMFIGGTLQLDKYGNSSTATASRVSGFGGAPNMGCDAKGRRHTTRSWLKCGEEF NATQQQLIGDMPRGKRLVVQMQETFREKRQPAFVDKLDAWQLAEKAGLDLPPVMVYADDVTHVLTEEGIAYLHRCDGLEQ RMAAIRAVAGYTDIGLAADPAQTQALRESGIVKTPEDLGIDRRRATRQLLAAKSIRDLVEWSGGLYNPPARFRNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61700; Mature: 61700
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKEHNWHQLKDDTEQRLQLIKPYLREGKIIAASDTVAVMEAILRSGDRVNIEGNNQKQA CCCCCCCHHCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCEEEECCCCCHHH DFLAECLCKVDPQKISGLHMVQSSVPLSTHLDLFEKGIAEKLDFAYAGPQDGRLAKLIQQ HHHHHHHHCCCHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH GKIKLGAIHTYLELFSRYFVDLTPRVSFITAFEADKDGNLYTGFNTEDTPVIAEATHFRQ CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEECCCCCCCCEEEEHHHHHC GIVIAQVNKIVDKVPRVDIPGDWVNAVIEAPRPFYVEPLFTRDPALITDTHVLMAMMALK CCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEECEECCCCCCHHHHHHHHHHHHHHH GIYAEYGVERINHGIGFFTAAIELLLPTYGEELGLKGKVCTHMVLNPHPTLIPAIESGWI HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHCCCCCHHHEEEECCCCCEEECHHCCCH QSVHCFGGELGMEKYVAERPDVFYIGQDGTLRSNRAFAQAAGHYALDMFIGGTLQLDKYG HHHHHHCCHHCHHHHHHCCCCEEEECCCCCCCCCHHHHHHCCCEEEEEEECCEEEEECCC NSSTATASRVSGFGGAPNMGCDAKGRRHTTRSWLKCGEEFNATQQQLIGDMPRGKRLVVQ CCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHCCHHHHHHHCCCCCCCHHHHH MQETFREKRQPAFVDKLDAWQLAEKAGLDLPPVMVYADDVTHVLTEEGIAYLHRCDGLEQ HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCHHH RMAAIRAVAGYTDIGLAADPAQTQALRESGIVKTPEDLGIDRRRATRQLLAAKSIRDLVE HHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHH WSGGLYNPPARFRNW HCCCCCCCCHHCCCC >Mature Secondary Structure MLKEHNWHQLKDDTEQRLQLIKPYLREGKIIAASDTVAVMEAILRSGDRVNIEGNNQKQA CCCCCCCHHCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCEEEECCCCCHHH DFLAECLCKVDPQKISGLHMVQSSVPLSTHLDLFEKGIAEKLDFAYAGPQDGRLAKLIQQ HHHHHHHHCCCHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH GKIKLGAIHTYLELFSRYFVDLTPRVSFITAFEADKDGNLYTGFNTEDTPVIAEATHFRQ CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEECCCCCCCCEEEEHHHHHC GIVIAQVNKIVDKVPRVDIPGDWVNAVIEAPRPFYVEPLFTRDPALITDTHVLMAMMALK CCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEECEECCCCCCHHHHHHHHHHHHHHH GIYAEYGVERINHGIGFFTAAIELLLPTYGEELGLKGKVCTHMVLNPHPTLIPAIESGWI HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHCCCCCHHHEEEECCCCCEEECHHCCCH QSVHCFGGELGMEKYVAERPDVFYIGQDGTLRSNRAFAQAAGHYALDMFIGGTLQLDKYG HHHHHHCCHHCHHHHHHCCCCEEEECCCCCCCCCHHHHHHCCCEEEEEEECCEEEEECCC NSSTATASRVSGFGGAPNMGCDAKGRRHTTRSWLKCGEEFNATQQQLIGDMPRGKRLVVQ CCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHCCHHHHHHHCCCCCCCHHHHH MQETFREKRQPAFVDKLDAWQLAEKAGLDLPPVMVYADDVTHVLTEEGIAYLHRCDGLEQ HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCHHH RMAAIRAVAGYTDIGLAADPAQTQALRESGIVKTPEDLGIDRRRATRQLLAAKSIRDLVE HHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHH WSGGLYNPPARFRNW HCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA