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The map label for this gene is yjiP [H]

Identifier: 218550397

GI number: 218550397

Start: 3174908

End: 3175828

Strand: Reverse

Name: yjiP [H]

Synonym: EFER_3089

Alternate gene names: 218550397

Gene position: 3175828-3174908 (Counterclockwise)

Preceding gene: 218550402

Following gene: 218550395

Centisome position: 69.21

GC content: 48.32

Gene sequence:

>921_bases
ATGACAAACTTCACGACCAGCACGCCGCATGATGCATTATTTAAAACCTTTCTCACGCACCCTGACACTGCGCAGGATTT
TATGGAGATTCACTTACCTAAAGATTTACGTGAACTGTGCGATCTCGATAGCTTAAAACTGGAATCCGCCAGCTTTGTCG
ATGAAAAATTGCGGGCGCTACACTCCGATATTTTATGGTCGGTAAAGACCCGTAAAGGAGATGGCTATATCTATGTGGTG
ATTGAACATCAGAGCCGTGAGGATATTCACATGGCTTTTCGGCTGATGCGCTATTCCATGGCGGTGATGCAGCGCCATAT
AGAGCATGATAAACGCCGACCGCTACCGCTGGTCATTCCGATGCTGTTTTATCACGGTAGCCGTAGTCCTTATCCCTGGT
CTTTGTGCTGGCTGGACGAATTTGCCGACCCGACTACCGCACGGAAGCTTTATACCGCCGCGTTCCCGCTGGTGGATGTC
ACTGTCGTGCCGGACGATGAGATTGTGCAGCATCGCAGAGTCGCCCTGTTGGAGTTGATCCAAAAGCATATTCGCCAGCG
CGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGT
TAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACAC
AGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATATATAAAAGGGGAGCAGCGCATTCTTCGATTGTT
GTTGCAGAATGGGGCGGATCCTGAATGGATACAAAAGATTACCGGACTTTCGGCAGAGCAAATGCAGGCATTAAGGCAGC
CCTTGCCTGAGCGTGAGCGCTATTCATGGCTCAAGAGCTAA

Upstream 100 bases:

>100_bases
ATAGCCTGGAAAGCGCCTCGGGGAATGGGAAATTGCCAGGTGAGAGTGGTTTTGTTAGTCGCTAAAGTCGGACCATCTTA
TCTACAGGTGACGGATCGCC

Downstream 100 bases:

>100_bases
TCAGAGACGGATGACAAACGCAAAGCAGCCTGATGCGCTATGCTTATCAGGTCTACATAACCCATTAAATATATTGAACT
TTAAAGATTTTTGTAGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTNFTTSTPHDALFKTFLTHPDTAQDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRALHSDILWSVKTRKGDGYIYVV
IEHQSREDIHMAFRLMRYSMAVMQRHIEHDKRRPLPLVIPMLFYHGSRSPYPWSLCWLDEFADPTTARKLYTAAFPLVDV
TVVPDDEIVQHRRVALLELIQKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYILLTGDEARFNEFISELTRRMPQH
RERIMTIAERIHNDGYIKGEQRILRLLLQNGADPEWIQKITGLSAEQMQALRQPLPERERYSWLKS

Sequences:

>Translated_306_residues
MTNFTTSTPHDALFKTFLTHPDTAQDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRALHSDILWSVKTRKGDGYIYVV
IEHQSREDIHMAFRLMRYSMAVMQRHIEHDKRRPLPLVIPMLFYHGSRSPYPWSLCWLDEFADPTTARKLYTAAFPLVDV
TVVPDDEIVQHRRVALLELIQKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYILLTGDEARFNEFISELTRRMPQH
RERIMTIAERIHNDGYIKGEQRILRLLLQNGADPEWIQKITGLSAEQMQALRQPLPERERYSWLKS
>Mature_305_residues
TNFTTSTPHDALFKTFLTHPDTAQDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRALHSDILWSVKTRKGDGYIYVVI
EHQSREDIHMAFRLMRYSMAVMQRHIEHDKRRPLPLVIPMLFYHGSRSPYPWSLCWLDEFADPTTARKLYTAAFPLVDVT
VVPDDEIVQHRRVALLELIQKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYILLTGDEARFNEFISELTRRMPQHR
ERIMTIAERIHNDGYIKGEQRILRLLLQNGADPEWIQKITGLSAEQMQALRQPLPERERYSWLKS

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1788643, Length=294, Percent_Identity=61.5646258503401, Blast_Score=378, Evalue=1e-106,
Organism=Escherichia coli, GI1789816, Length=293, Percent_Identity=56.9965870307167, Blast_Score=357, Evalue=1e-100,
Organism=Escherichia coli, GI1788577, Length=292, Percent_Identity=56.5068493150685, Blast_Score=338, Evalue=2e-94,
Organism=Escherichia coli, GI1786324, Length=257, Percent_Identity=52.5291828793774, Blast_Score=280, Evalue=6e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 35874; Mature: 35743

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNFTTSTPHDALFKTFLTHPDTAQDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRAL
CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHCCCCHHCCHHHHHHHHHHHHH
HSDILWSVKTRKGDGYIYVVIEHQSREDIHMAFRLMRYSMAVMQRHIEHDKRRPLPLVIP
HHHHHHHEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
MLFYHGSRSPYPWSLCWLDEFADPTTARKLYTAAFPLVDVTVVPDDEIVQHRRVALLELI
HHHHCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHH
QKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYILLTGDEARFNEFISELTRRMPQH
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RERIMTIAERIHNDGYIKGEQRILRLLLQNGADPEWIQKITGLSAEQMQALRQPLPERER
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHH
YSWLKS
HHHHCC
>Mature Secondary Structure 
TNFTTSTPHDALFKTFLTHPDTAQDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRAL
CCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHCCCCHHCCHHHHHHHHHHHHH
HSDILWSVKTRKGDGYIYVVIEHQSREDIHMAFRLMRYSMAVMQRHIEHDKRRPLPLVIP
HHHHHHHEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
MLFYHGSRSPYPWSLCWLDEFADPTTARKLYTAAFPLVDVTVVPDDEIVQHRRVALLELI
HHHHCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHH
QKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYILLTGDEARFNEFISELTRRMPQH
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RERIMTIAERIHNDGYIKGEQRILRLLLQNGADPEWIQKITGLSAEQMQALRQPLPERER
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHH
YSWLKS
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]