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The map label for this gene is yjiS [H]

Identifier: 218550395

GI number: 218550395

Start: 3172911

End: 3173075

Strand: Reverse

Name: yjiS [H]

Synonym: EFER_3087

Alternate gene names: 218550395

Gene position: 3173075-3172911 (Counterclockwise)

Preceding gene: 218550397

Following gene: 218550394

Centisome position: 69.15

GC content: 55.76

Gene sequence:

>165_bases
ATGGAATTTCACGAAAACAGAGCTAAAGCGCCGTTTATCGGCCTCGTGCAACTCTGGCAGGCGGTGAGGCGTTGGCGGCG
GCAAATGCAGACCCGACGCGTGTTACAGCAGATGAGTGATGAGCGGTTGAGGGATATTGGGTTACGCAGGGAGGATGTGG
AGTGA

Upstream 100 bases:

>100_bases
TTTAACCTGTCTGTATGTTAAATAAAAGTAATATTTGAATCTGTATTGTGAACTGCCAGAAGGCGGATGATGAAGCCTCT
GAAAGATGAGGAGGCAGCAG

Downstream 100 bases:

>100_bases
GGGGGGATATAGATTTATATATAATAAAACGTTTTTATGTTTTTAAATTAAGTTATAAAAATTTTCCCGAGACAATTCAT
CAATAGGTATGGAGTGTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 54; Mature: 54

Protein sequence:

>54_residues
MEFHENRAKAPFIGLVQLWQAVRRWRRQMQTRRVLQQMSDERLRDIGLRREDVE

Sequences:

>Translated_54_residues
MEFHENRAKAPFIGLVQLWQAVRRWRRQMQTRRVLQQMSDERLRDIGLRREDVE
>Mature_54_residues
MEFHENRAKAPFIGLVQLWQAVRRWRRQMQTRRVLQQMSDERLRDIGLRREDVE

Specific function: Unknown

COG id: COG5457

COG function: function code S; Uncharacterized conserved small protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790798, Length=54, Percent_Identity=98.1481481481482, Blast_Score=107, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009506 [H]

Pfam domain/function: PF06568 DUF1127 [H]

EC number: NA

Molecular weight: Translated: 6737; Mature: 6737

Theoretical pI: Translated: 11.87; Mature: 11.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFHENRAKAPFIGLVQLWQAVRRWRRQMQTRRVLQQMSDERLRDIGLRREDVE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEFHENRAKAPFIGLVQLWQAVRRWRRQMQTRRVLQQMSDERLRDIGLRREDVE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]