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The map label for this gene is yjiM [H]

Identifier: 218550359

GI number: 218550359

Start: 3124175

End: 3125326

Strand: Direct

Name: yjiM [H]

Synonym: EFER_3051

Alternate gene names: 218550359

Gene position: 3124175-3125326 (Clockwise)

Preceding gene: 218550355

Following gene: 218550360

Centisome position: 68.08

GC content: 48.61

Gene sequence:

>1152_bases
ATGTCACTTATTACCGATCTACCCGCCATTTTTAATCAGTTCTCTGAAGCTCGCCAGAAAGGTTTTCTCACCGTTATGGA
GCTTAAAGAACGGGGAATCCCCCTCGTAGGAACATACTGCACCTTTATGCCTCAGGAGATCCCGATGGCTGCCGGGGCGG
TTGTGGTCTCATTGTGTTCCACCTCTGACGAAACTATCGAAGAAGCAGAAAAAGATTTACCACGTAATCTCTGCCCACTT
ATCAAAAGCAGTTACGGGTTTGGCAAAACCGATAAATGCCCCTATTTCTATTTTTCTGACCTGGTAGTAGGTGAAACAAC
CTGTGATGGAAAAAAGAAAATGTATGAATACATGGCGGAATTTAAGCCCGTCCATGTAATGCAACTGCCGAACAGTGTGC
AGGATCAAGCCTCCCGCGCGCTGTGGAAAGCTGAAATGCGGCGTTTGCAGGAAGTCATAGAAACGCGTTTTGGTAAGACG
ATCAGCGAAGAGGCTCTGCGGGAAGCGATAGCACTTAAAAACCGCGAACGCCGGGCACTGGCAGACTTTTATCATCTTGG
TCAATTAAATCCGCCTGCACTCAGCGGCAGCGACATCCTGAAAGTGGTGTACGGTGCCACTTTCCGTTTCGATAAAGAAG
TGCTGATCAGTGAGCTTGAGGCGATGACAGCTCGTATTCGCCAACAATGGGAATCTGGCGAACGGCTGGATCCTCGTCCC
CGTATTTTGATCACCGGCTGCCCGATTGGCGGTGCGGCAGAAAAAGTTGTACGGGCGATAGAAGAGAATGGCGGTTGGGT
GGTCGGTTATGAAAACTGTACCGGGGCGAAAGCTACCGAACAGTGTGTCGCTGAAACAGGCGATGTTTATGATGCATTGA
CCGATAAATATCTGGCAATTGGTTGTTCCTGTATTTCACCTAATGAACAACGGCTTAAACTTCTTAGTCAAATGGTAGAA
GAGTACCAGGTCGATGGCGTGGTGGATGTCATTTTGCAGGCATGTCATACCTATGCGGTGGAATCGCTGGCTATTAAGCA
CCACGTTCGCCAGCAGCACAACATTCCTTATATCGCCATTGAAACGGACTACTCCACTGCGGATATCGGGCAACTGAGCA
CACGTGTGGCTGCGTTTATTGAAATGTTGTAA

Upstream 100 bases:

>100_bases
CGGTAACCGCCATTTACGTCAGATCAAATAAACCATATAAAACTCATGGTTATAATGTGAACTCATTTCATCATCTCCCG
TGGTACGGGGAAGGAAAATC

Downstream 100 bases:

>100_bases
GAGGTGGTTGTGACGTATTCAATAGGGATTGATTCTGGTTCCACCGCCACCAAGGGGATCTTACTGGCAGACGGCGTGAT
TATGCGCCGTTTTCTCTGCC

Product: 2-hydroxyglutaryl-CoA dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MSLITDLPAIFNQFSEARQKGFLTVMELKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCSTSDETIEEAEKDLPRNLCPL
IKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKPVHVMQLPNSVQDQASRALWKAEMRRLQEVIETRFGKT
ISEEALREAIALKNRERRALADFYHLGQLNPPALSGSDILKVVYGATFRFDKEVLISELEAMTARIRQQWESGERLDPRP
RILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALTDKYLAIGCSCISPNEQRLKLLSQMVE
EYQVDGVVDVILQACHTYAVESLAIKHHVRQQHNIPYIAIETDYSTADIGQLSTRVAAFIEML

Sequences:

>Translated_383_residues
MSLITDLPAIFNQFSEARQKGFLTVMELKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCSTSDETIEEAEKDLPRNLCPL
IKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKPVHVMQLPNSVQDQASRALWKAEMRRLQEVIETRFGKT
ISEEALREAIALKNRERRALADFYHLGQLNPPALSGSDILKVVYGATFRFDKEVLISELEAMTARIRQQWESGERLDPRP
RILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALTDKYLAIGCSCISPNEQRLKLLSQMVE
EYQVDGVVDVILQACHTYAVESLAIKHHVRQQHNIPYIAIETDYSTADIGQLSTRVAAFIEML
>Mature_382_residues
SLITDLPAIFNQFSEARQKGFLTVMELKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCSTSDETIEEAEKDLPRNLCPLI
KSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKPVHVMQLPNSVQDQASRALWKAEMRRLQEVIETRFGKTI
SEEALREAIALKNRERRALADFYHLGQLNPPALSGSDILKVVYGATFRFDKEVLISELEAMTARIRQQWESGERLDPRPR
ILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALTDKYLAIGCSCISPNEQRLKLLSQMVEE
YQVDGVVDVILQACHTYAVESLAIKHHVRQQHNIPYIAIETDYSTADIGQLSTRVAAFIEML

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0007 [H]

Homologues:

Organism=Escherichia coli, GI87082427, Length=383, Percent_Identity=92.4281984334204, Blast_Score=753, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010327 [H]

Pfam domain/function: PF06050 HGD-D [H]

EC number: NA

Molecular weight: Translated: 42838; Mature: 42706

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLITDLPAIFNQFSEARQKGFLTVMELKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCS
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEHHHHHCCHHCCHHHHHHHHHHHC
TSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAE
CCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHH
FKPVHVMQLPNSVQDQASRALWKAEMRRLQEVIETRFGKTISEEALREAIALKNRERRAL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHH
ADFYHLGQLNPPALSGSDILKVVYGATFRFDKEVLISELEAMTARIRQQWESGERLDPRP
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALTDKYLAI
CEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
GCSCISPNEQRLKLLSQMVEEYQVDGVVDVILQACHTYAVESLAIKHHVRQQHNIPYIAI
CCEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
ETDYSTADIGQLSTRVAAFIEML
ECCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLITDLPAIFNQFSEARQKGFLTVMELKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCS
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEHHHHHCCHHCCHHHHHHHHHHHC
TSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAE
CCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEECCEEECCCCCCHHHHHHHHHHH
FKPVHVMQLPNSVQDQASRALWKAEMRRLQEVIETRFGKTISEEALREAIALKNRERRAL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHH
ADFYHLGQLNPPALSGSDILKVVYGATFRFDKEVLISELEAMTARIRQQWESGERLDPRP
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALTDKYLAI
CEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
GCSCISPNEQRLKLLSQMVEEYQVDGVVDVILQACHTYAVESLAIKHHVRQQHNIPYIAI
CCEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
ETDYSTADIGQLSTRVAAFIEML
ECCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]