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The map label for this gene is ygiL [H]

Identifier: 218550294

GI number: 218550294

Start: 3054045

End: 3054608

Strand: Direct

Name: ygiL [H]

Synonym: EFER_2986

Alternate gene names: 218550294

Gene position: 3054045-3054608 (Clockwise)

Preceding gene: 218550292

Following gene: 218550295

Centisome position: 66.56

GC content: 44.86

Gene sequence:

>564_bases
ATGTTTAAAAAAACGCTCCTCTCTGTTGTTGCAACCGCACTATTATCTGGCGTTGCTTTTAACGCGCTTGCTGATGACCC
TAATCAGGGTTCCGGTAAAATAACGTTCAAAGGTGAAGTTATCGATGCACCTTGTTCTATTGCTCCAGGTGATGAAGATC
AGACAATTAACCTCGGTGAAGTTGCTAATACTGTATTAAAAAGCGGACAGAAATCTCTGCCTGTAGATGTCACCATTCAT
TTGCAGGATTGTATTTTATCTGACGGTACTAACACTGTTGATAAAGTCAAAATCACCTTTAGTTCTGCCAGTGTTGACTC
TACCGACTCCAGCCTGCTTAAAAACACACTGGAAGGTAACATCGGCGGTGCAACTGATGTCGGCGTACGTCTGGTGAAAT
CAGACAACACCAACGTGACTCTTGGTACCCCAATCACCATCGACTTCCCGACGACTAATTCCTACCAGGAGTTGAACTTT
AAAGCCCGTATGGAATCTCTGGGACGTACCGCGACCCCAGGTAATGTGCAGGCACAGGCTAATTACGTACTCGACTACAA
GTAA

Upstream 100 bases:

>100_bases
GTTGTATTCATGGTAATGTTACAACCGGAATTAATATCAGATTCGACTCTATATTGTTTCCTCATCCCAAGCATTTCCTA
ATTTATAAAGGATTATAGTA

Downstream 100 bases:

>100_bases
TCGGCAGTTAATACCCACACAACACCAGGCGGTAAAGCCGATGAAATTTCATCGGCAACTTTGGGTCTTTTTAGAAATGG
ATTTTTATGAACAATAAAAA

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MFKKTLLSVVATALLSGVAFNALADDPNQGSGKITFKGEVIDAPCSIAPGDEDQTINLGEVANTVLKSGQKSLPVDVTIH
LQDCILSDGTNTVDKVKITFSSASVDSTDSSLLKNTLEGNIGGATDVGVRLVKSDNTNVTLGTPITIDFPTTNSYQELNF
KARMESLGRTATPGNVQAQANYVLDYK

Sequences:

>Translated_187_residues
MFKKTLLSVVATALLSGVAFNALADDPNQGSGKITFKGEVIDAPCSIAPGDEDQTINLGEVANTVLKSGQKSLPVDVTIH
LQDCILSDGTNTVDKVKITFSSASVDSTDSSLLKNTLEGNIGGATDVGVRLVKSDNTNVTLGTPITIDFPTTNSYQELNF
KARMESLGRTATPGNVQAQANYVLDYK
>Mature_187_residues
MFKKTLLSVVATALLSGVAFNALADDPNQGSGKITFKGEVIDAPCSIAPGDEDQTINLGEVANTVLKSGQKSLPVDVTIH
LQDCILSDGTNTVDKVKITFSSASVDSTDSSLLKNTLEGNIGGATDVGVRLVKSDNTNVTLGTPITIDFPTTNSYQELNF
KARMESLGRTATPGNVQAQANYVLDYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1789422, Length=186, Percent_Identity=59.6774193548387, Blast_Score=207, Evalue=2e-55,
Organism=Escherichia coli, GI1786938, Length=196, Percent_Identity=40.3061224489796, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI87082421, Length=157, Percent_Identity=29.2993630573248, Blast_Score=64, Evalue=5e-12,
Organism=Escherichia coli, GI1790769, Length=141, Percent_Identity=34.0425531914894, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19684; Mature: 19684

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKTLLSVVATALLSGVAFNALADDPNQGSGKITFKGEVIDAPCSIAPGDEDQTINLGE
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECEEEECCCCCCCCCCCCEEEHHH
VANTVLKSGQKSLPVDVTIHLQDCILSDGTNTVDKVKITFSSASVDSTDSSLLKNTLEGN
HHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCC
IGGATDVGVRLVKSDNTNVTLGTPITIDFPTTNSYQELNFKARMESLGRTATPGNVQAQA
CCCCCCCEEEEEECCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEE
NYVLDYK
EEEEECC
>Mature Secondary Structure
MFKKTLLSVVATALLSGVAFNALADDPNQGSGKITFKGEVIDAPCSIAPGDEDQTINLGE
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECEEEECCCCCCCCCCCCEEEHHH
VANTVLKSGQKSLPVDVTIHLQDCILSDGTNTVDKVKITFSSASVDSTDSSLLKNTLEGN
HHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCC
IGGATDVGVRLVKSDNTNVTLGTPITIDFPTTNSYQELNFKARMESLGRTATPGNVQAQA
CCCCCCCEEEEEECCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEE
NYVLDYK
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1917833; 7984428 [H]