Click here to switch to the map view.

The map label for this gene is dsbB [C]

Identifier: 218550290

GI number: 218550290

Start: 3050819

End: 3051490

Strand: Direct

Name: dsbB [C]

Synonym: EFER_2982

Alternate gene names: 218550290

Gene position: 3050819-3051490 (Clockwise)

Preceding gene: 218550289

Following gene: 218550292

Centisome position: 66.49

GC content: 50.45

Gene sequence:

>672_bases
ATGGGTATCAAGGGAATGTGGAAAGACCTTCGCACTTCACCGGTAGACACTCTGGTGAGATGGCAAGAGCAACGCTTCTT
ATGGTTGTTAATGGCTGTTGCGATGGGCGCGCTGATTATCCTGGCGCACTCTTTCTTCCAGATCTATCTCTACATGGCGC
CGTGTGAACAGTGTGTTTACATCCGCTACGCCATGTTTGTGATGGTTATTGGAGGATTGGTTGCGGCGATCAACCCGAAA
AACATCGTCCTCAAGCTGATTGGATGCGTTATGGCATTCTACGGCAGTATTATGGGACTTAAGTTTTCGTTCAAACTGAA
TGATATCCACCACGCGGTGCATAACCCGGATCCGGATTCACTGTTTGGCGTACAGGGTTGCTCGACCGATCCAACTTTCC
CCTTTAACCTGCCGCTGGCACAGTGGGCGCCGAACTGGTTTAAACCTACCGGGGATTGTGGTTATGACGCCCCCATCGTT
CCCGATGGCGTCACACTGAGCAGTACTCAGCAATGGTTTGTTGACCTTTATCAGCAATCCGAAGGTTGGTATCTGCTGCC
GCCGTGGCACTTTATGAACATGGCTCAGTCTTGTATGTTGGCGTTTGGTCTCTGCCTGTTACTGCTGCTGGTAATGAGTG
GTGCATGGGGACTTAAGCTGGTAAGAAGGTAA

Upstream 100 bases:

>100_bases
TTAATGGTAAATACTTGATTTACACCAAGAGCATCAAATCCATTGACACTATGGCTGACCTTATCCGTGAGTTAGCAAGC
AAATAACAGGGAAACAGGCT

Downstream 100 bases:

>100_bases
GTAATGCAAACCGAAGCCAGGCTTCTGGCTTCGGTTTTATTCATTGCTTAGCCAATCTGTACTGACAACATACTCAGGCT
TCCCATTTCAATCCCCTCTA

Product: disulfide oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MGIKGMWKDLRTSPVDTLVRWQEQRFLWLLMAVAMGALIILAHSFFQIYLYMAPCEQCVYIRYAMFVMVIGGLVAAINPK
NIVLKLIGCVMAFYGSIMGLKFSFKLNDIHHAVHNPDPDSLFGVQGCSTDPTFPFNLPLAQWAPNWFKPTGDCGYDAPIV
PDGVTLSSTQQWFVDLYQQSEGWYLLPPWHFMNMAQSCMLAFGLCLLLLLVMSGAWGLKLVRR

Sequences:

>Translated_223_residues
MGIKGMWKDLRTSPVDTLVRWQEQRFLWLLMAVAMGALIILAHSFFQIYLYMAPCEQCVYIRYAMFVMVIGGLVAAINPK
NIVLKLIGCVMAFYGSIMGLKFSFKLNDIHHAVHNPDPDSLFGVQGCSTDPTFPFNLPLAQWAPNWFKPTGDCGYDAPIV
PDGVTLSSTQQWFVDLYQQSEGWYLLPPWHFMNMAQSCMLAFGLCLLLLLVMSGAWGLKLVRR
>Mature_222_residues
GIKGMWKDLRTSPVDTLVRWQEQRFLWLLMAVAMGALIILAHSFFQIYLYMAPCEQCVYIRYAMFVMVIGGLVAAINPKN
IVLKLIGCVMAFYGSIMGLKFSFKLNDIHHAVHNPDPDSLFGVQGCSTDPTFPFNLPLAQWAPNWFKPTGDCGYDAPIVP
DGVTLSSTQQWFVDLYQQSEGWYLLPPWHFMNMAQSCMLAFGLCLLLLLVMSGAWGLKLVRR

Specific function: May be required for disulfide bond formation in some proteins (Potential) [H]

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbB family. DsbI subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003752 [H]

Pfam domain/function: PF02600 DsbB [H]

EC number: NA

Molecular weight: Translated: 25240; Mature: 25109

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIKGMWKDLRTSPVDTLVRWQEQRFLWLLMAVAMGALIILAHSFFQIYLYMAPCEQCVY
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRYAMFVMVIGGLVAAINPKNIVLKLIGCVMAFYGSIMGLKFSFKLNDIHHAVHNPDPDS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHCCCCCCC
LFGVQGCSTDPTFPFNLPLAQWAPNWFKPTGDCGYDAPIVPDGVTLSSTQQWFVDLYQQS
EEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
EGWYLLPPWHFMNMAQSCMLAFGLCLLLLLVMSGAWGLKLVRR
CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
>Mature Secondary Structure 
GIKGMWKDLRTSPVDTLVRWQEQRFLWLLMAVAMGALIILAHSFFQIYLYMAPCEQCVY
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRYAMFVMVIGGLVAAINPKNIVLKLIGCVMAFYGSIMGLKFSFKLNDIHHAVHNPDPDS
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHCCCCCCC
LFGVQGCSTDPTFPFNLPLAQWAPNWFKPTGDCGYDAPIVPDGVTLSSTQQWFVDLYQQS
EEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
EGWYLLPPWHFMNMAQSCMLAFGLCLLLLLVMSGAWGLKLVRR
CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA