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The map label for this gene is yafT [H]

Identifier: 218550233

GI number: 218550233

Start: 2992824

End: 2993612

Strand: Direct

Name: yafT [H]

Synonym: EFER_2925

Alternate gene names: 218550233

Gene position: 2992824-2993612 (Clockwise)

Preceding gene: 218550232

Following gene: 218550239

Centisome position: 65.22

GC content: 40.81

Gene sequence:

>789_bases
ATGAGTACCAGGTCAATATTCTTTTTATGCGCAACCGCATTTCTGTTTGCAGGTTGCACACCTCACTCACCGATAGACGC
AAAGAAAACGACACCTGTGGTGAAAGAGAATAATGCGAAATCGAAAAGTGCCTCATCCTTGTTGACAGATAAAGATATTT
TTGGCAATGAAACGACCTTAAATATTTCAGAAGAAGATATTCAGGCGGCCCTGGAAGGTGAAGAATTCCGTGTTCCTTTG
AGCTCCCCTATTATTCTTGTGCAATCTGGCAGTCGTGCGCCAGAAGCCATCATGCAACAGGAAATGAGTAAATATTATAC
TGTCGCTACATTTTCTGGCATCCCGGATCGGCAGAAAACACCAACATGCAATAAAGACAAAAATAAAAATGACGAATCAG
ATGTTGCCAATTCAGAAAATATTAACTGGATGCAGGCATTGCGCTATATTGCAGCAAAAGGACATCAGAAAGCAATTATT
GTTTATCAGGATACGTTACAGACTGGAAAATATAACTCAGCGACAAAAATGATGGTCTGGTCAGATTATAAAAATGAGAA
ACTGACTGATACCATGTCGCTGCGTTACTTAATGCGCTTTACACTTGTCGATGTTGCATCAGGGGAATGGGCTACCTGGT
CACCCGTTAATTATGAGTCGCGAGTTATTTTCCCCAAAGCTGATAAAAAAAGCGCAAATGGCACCGAAGTCACTGAGCAA
CAAATCTCTCAGCTAAAACAAAGAACTTACGCAGCGATGGTACAAGATCTGGTAAAACGTTATCAATAA

Upstream 100 bases:

>100_bases
AATATATTTAGCATTATCGTTGATTAGTTGCATCGGTATATAATGAGCACCTTTTTATAATCAACAGAACAATACAACTC
ACGAACGAAGGATCGAAAAA

Downstream 100 bases:

>100_bases
TCATACCAGTCTGCCACGGTATGATTATTGGCAGACTGGAATATGTTCTCATATTTCAAGTTGTATATGCTGCGTCTGTG
TGCGTTCACCCCAGCCACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSTRSIFFLCATAFLFAGCTPHSPIDAKKTTPVVKENNAKSKSASSLLTDKDIFGNETTLNISEEDIQAALEGEEFRVPL
SSPIILVQSGSRAPEAIMQQEMSKYYTVATFSGIPDRQKTPTCNKDKNKNDESDVANSENINWMQALRYIAAKGHQKAII
VYQDTLQTGKYNSATKMMVWSDYKNEKLTDTMSLRYLMRFTLVDVASGEWATWSPVNYESRVIFPKADKKSANGTEVTEQ
QISQLKQRTYAAMVQDLVKRYQ

Sequences:

>Translated_262_residues
MSTRSIFFLCATAFLFAGCTPHSPIDAKKTTPVVKENNAKSKSASSLLTDKDIFGNETTLNISEEDIQAALEGEEFRVPL
SSPIILVQSGSRAPEAIMQQEMSKYYTVATFSGIPDRQKTPTCNKDKNKNDESDVANSENINWMQALRYIAAKGHQKAII
VYQDTLQTGKYNSATKMMVWSDYKNEKLTDTMSLRYLMRFTLVDVASGEWATWSPVNYESRVIFPKADKKSANGTEVTEQ
QISQLKQRTYAAMVQDLVKRYQ
>Mature_261_residues
STRSIFFLCATAFLFAGCTPHSPIDAKKTTPVVKENNAKSKSASSLLTDKDIFGNETTLNISEEDIQAALEGEEFRVPLS
SPIILVQSGSRAPEAIMQQEMSKYYTVATFSGIPDRQKTPTCNKDKNKNDESDVANSENINWMQALRYIAAKGHQKAIIV
YQDTLQTGKYNSATKMMVWSDYKNEKLTDTMSLRYLMRFTLVDVASGEWATWSPVNYESRVIFPKADKKSANGTEVTEQQ
ISQLKQRTYAAMVQDLVKRYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786410, Length=262, Percent_Identity=67.9389312977099, Blast_Score=376, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29491; Mature: 29359

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRSIFFLCATAFLFAGCTPHSPIDAKKTTPVVKENNAKSKSASSLLTDKDIFGNETTL
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHCCHHHCCCCEEE
NISEEDIQAALEGEEFRVPLSSPIILVQSGSRAPEAIMQQEMSKYYTVATFSGIPDRQKT
ECCHHHHHHHHCCCEEECCCCCCEEEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCCCC
PTCNKDKNKNDESDVANSENINWMQALRYIAAKGHQKAIIVYQDTLQTGKYNSATKMMVW
CCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEE
SDYKNEKLTDTMSLRYLMRFTLVDVASGEWATWSPVNYESRVIFPKADKKSANGTEVTEQ
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHH
QISQLKQRTYAAMVQDLVKRYQ
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STRSIFFLCATAFLFAGCTPHSPIDAKKTTPVVKENNAKSKSASSLLTDKDIFGNETTL
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHCCHHHCCCCEEE
NISEEDIQAALEGEEFRVPLSSPIILVQSGSRAPEAIMQQEMSKYYTVATFSGIPDRQKT
ECCHHHHHHHHCCCEEECCCCCCEEEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCCCC
PTCNKDKNKNDESDVANSENINWMQALRYIAAKGHQKAIIVYQDTLQTGKYNSATKMMVW
CCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEE
SDYKNEKLTDTMSLRYLMRFTLVDVASGEWATWSPVNYESRVIFPKADKKSANGTEVTEQ
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHH
QISQLKQRTYAAMVQDLVKRYQ
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]